Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1455 ATGTTTGGTGATTGTCAAGTTATGTCAACAATGGGAGGAGGAAATGTAGTAGTGAACTCAGAATCTCTCTTTTCTTCTCCGATCCATAACCCTAACTTCAACTTCATGTCTACCATGCCTTTTCAGCCGTTTTCTTCTTCCATGAAAGAAGAAGATGGAATGTTGAGAGGGAAAGAAGAGATAATGGATCAAAGTGGCTCGGGGAGCGAACAAGTTGAAGATAAGTCGGGGAATGAACAAGAGATTACTAATGAACAAGAAACTACGAAGAAGAAACGTTATCATCGACACACTGCTCGCCAGATCCAAGAAATGGAAGCATTATTTAAGGAATGTCCACACCCAGATGATAAACAAAGACTGAAACTAAGCCATGATTTGGGATTAAAACCACGGCAAGTTAAATTCTGGTTTCAGAATCGTCGAACTCAAATGAAGGCACAACAAGATCGTTCGGATAATGTGATACTTAGAGCAGAGAATGAGAATTTAAAGAATGAGAACTATCGACTACAAGCGGCTTTACGTAATATTATGTGTCCTAATTGTGGCGGGCCATGTATAATGGGTCCTGATTTGGGTTTGGATGATCATCAAATTCGACTTGAAAATGCCAGGTTAAGAGAAGAGCTAGAACGTGTATGTTGTATCACATCAAGATACACCGGTCGCCAAATTCAAACAATGGCACCACCTCAATCTCTTATGCAACCATCATTGGACTTAGACATGAACATATACCCAACAAGACACTTTTCTGATCAATTAATGACACCATGCACTGAAATGATTCCTGTCCCTATGCTACCACATGAACATTCACATTTTCAAGAGGGTGGTCTCTTATTATTGGAAGATGAAAAATCACTTGCAATGGAATTTGCAGCTTCTTCTATGGCTGAACTTATTAAGATGTGTCAAATGAATGAACCGCTTTGGATTCGTAACGGTGAAAATGAAAGGGAAGTTCTTAATTTTGATGAGCATGCTAGGCTTTTTTCATGGCCTTTGAATCTTAAGCAAAGAAGTGAGATGAGGACTGAAGCTACACGTGATTCTGCTGTTGTTATTATGAATAGTGTTACTCTTGTTGATGCTTTTCTTGATGCTCAAAAATGGATGGAATTGTTTCCAACAATTGTTGCTAGAGCAAGAACTGTTCAAATTATAGCTTCTGGTGCTTCTGGTCATGCAAGTGGGACTCTTCAGCTGATGCATGCAGAATTCCAAGTTCTTTCTCCATTGATATCAACTAGAGAGACTCATTTTCTTCGATATTGTCAGCAAAATGCAGAGGAAGGAACATGGGCCATTGTTGATTTTCCTGTTGACAGCTTCCAACAAAATTTTCACAATTCTTATCCCAAATACTGCAGAAGATCTTCTGGCTGTGTCATTCAAGATATGCCAAATGGCTATTCAAGGGTAACATGGGTTGAGCATGCAAAAGTTGTTGAAAAACCTGTTCATCAAATATTAAGCAACTATGTGTATAGTGGAATGGCATTTGGTGCACAACGTTGGTTAGGAGTTTTGCAAAGACAATGTGAAAGGGTTGCTAGTCTCATGGCTAGAAACATATCAGATCTTGGAGTGATACCTTCTCCGGAAGCGCGGAAGAACTTGATGAAACTAGCAAACAGGATGATAAAAACTTTTAGTCTTAATATGACAACTTATGGTGGCCAATCATGGACTGCTATATCAGATTCACCAGAAGACACTGTTAGAATCACTACTAGGAAAATCACTGAGCCTGGCCAACCTAATGGTGTGATTCTTGCTGCGGTTTCAACCACTTGGCTTCCTTATTCTCATACCAAAGTCTTTGATCTCCTCCGTGACGAACGCCACAGATCTCAGATGGATGCACTTTCTAATGGGAACTCATTAAATGAAGTGGCTCATATTGCAAATGGTTCACATCCAGGAAACTGCATTTCCCTTCTTCGTATAAATGTTGCAAGTAACTCATCTCAAAATGTAGAGCTAATGCTGCAAGAGACATGCACAGATCAATCTGGAAGCCTAGTAGTCTACACGACAATCGATGTTGATTCGATCCAGCTAGCCATGAGTGGTGAAGACCCTTCATGCATTTCACTTCTTCCACAAGGGTTCATGATAGTACCAATGGTTTCATCAAACACTGAGACATCATCTGAACAAGGTGTGACAGGAACACCATCATCAACTTCTAGTGCTTCTGCTGCTGCTAACTCAGGTTGTCTTCTTATCATGGGAATGCAAGTTCTAGCAAGCTCAATTCCTTCTGCAAAACTTAACCTTTCAAGCGTCACGGCAATCAATAACCACCTCTGCAATACCCTGCATCAAATTGAAGGTGCTCTTTGTAGCACCACTAACAACAATTGCTTTGTTGGGTCTTGCAATGAACCAACCACTAGTGCACCTCCCAAGTAA 2424 0.4035 MFGDCQVMSTMGGGNVVVNSESLFSSPIHNPNFNFMSTMPFQPFSSSMKEEDGMLRGKEEIMDQSGSGSEQVEDKSGNEQEITNEQETTKKKRYHRHTARQIQEMEALFKECPHPDDKQRLKLSHDLGLKPRQVKFWFQNRRTQMKAQQDRSDNVILRAENENLKNENYRLQAALRNIMCPNCGGPCIMGPDLGLDDHQIRLENARLREELERVCCITSRYTGRQIQTMAPPQSLMQPSLDLDMNIYPTRHFSDQLMTPCTEMIPVPMLPHEHSHFQEGGLLLLEDEKSLAMEFAASSMAELIKMCQMNEPLWIRNGENEREVLNFDEHARLFSWPLNLKQRSEMRTEATRDSAVVIMNSVTLVDAFLDAQKWMELFPTIVARARTVQIIASGASGHASGTLQLMHAEFQVLSPLISTRETHFLRYCQQNAEEGTWAIVDFPVDSFQQNFHNSYPKYCRRSSGCVIQDMPNGYSRVTWVEHAKVVEKPVHQILSNYVYSGMAFGAQRWLGVLQRQCERVASLMARNISDLGVIPSPEARKNLMKLANRMIKTFSLNMTTYGGQSWTAISDSPEDTVRITTRKITEPGQPNGVILAAVSTTWLPYSHTKVFDLLRDERHRSQMDALSNGNSLNEVAHIANGSHPGNCISLLRINVASNSSQNVELMLQETCTDQSGSLVVYTTIDVDSIQLAMSGEDPSCISLLPQGFMIVPMVSSNTETSSEQGVTGTPSSTSSASAAANSGCLLIMGMQVLASSIPSAKLNLSSVTAINNHLCNTLHQIEGALCSTTNNNCFVGSCNEPTTSAPPK* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1455 807 CDD homeodomain 91 149 IPR001356 GO:0003677
Tpr2g1455 807 CDD START_ArGLABRA2_like 288 517 - -
Tpr2g1455 807 Pfam START domain 294 518 IPR002913 GO:0008289
Tpr2g1455 807 Pfam Homeodomain 91 146 IPR001356 GO:0003677
Tpr2g1455 807 ProSitePatterns 'Homeobox' domain signature. 123 146 IPR017970 GO:0000981|GO:0006355
Tpr2g1455 807 SUPERFAMILY Bet v1-like 286 520 - -
Tpr2g1455 807 Gene3D - 338 503 IPR023393 -
Tpr2g1455 807 MobiDBLite consensus disorder prediction 74 92 - -
Tpr2g1455 807 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 76 791 IPR042160 -
Tpr2g1455 807 PANTHER - 76 791 - -
Tpr2g1455 807 Coils Coil 147 177 - -
Tpr2g1455 807 ProSiteProfiles START domain profile. 284 521 IPR002913 GO:0008289
Tpr2g1455 807 SMART START_1 293 518 IPR002913 GO:0008289
Tpr2g1455 807 SUPERFAMILY Homeodomain-like 81 149 IPR009057 -
Tpr2g1455 807 ProSiteProfiles 'Homeobox' domain profile. 88 148 IPR001356 GO:0003677
Tpr2g1455 807 MobiDBLite consensus disorder prediction 61 96 - -
Tpr2g1455 807 SMART HOX_1 89 152 IPR001356 GO:0003677
Tpr2g1455 807 SUPERFAMILY Bet v1-like 545 781 - -
Tpr2g1455 807 Gene3D - 76 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1455 Tpr-Chr2 17133818 17140372 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1455 8 787 Homeobox Transcription Factor Family AT5G46880 55.914 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Tpr2g1455 START 2.3e-36 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1455 - - cam:101514650 1438.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1455 2 17133818 17140372 Tpr2g1455 2 17133818 17140372 ECH
Tpr2g1455 2 17133818 17140372 Tpr1g0717 1 6072669 6078600 ECH
Tpr2g1455 2 17133818 17140372 Tpr2g4351 2 47297967 47301165 ECH