Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1445 ATGACGGCAACAACAAATGCAGAAGAACAAGAAGCAGCACGTCTCAAAACAATAGCAGAAACAAAATACAAAACAACCAAAAACACAAAATCAGCACTCAAATACGCCAAACGAGCATAACGTTCAGCACCACACTTACAAGGAATCTCAGACTTAGTCACTTCTCTCAACATCCTATCCTCCCCTGATTTCTACGCCGTTCTCGACGTCGAACCCACCGCCACAATCACCACCATTCATAAACACTACAAAAAACTATCTTCACTTCTTCACCCTAACAATAATCACCACCACGTTGAATCTTCTCAAGAAGCCCTCAAACTTGTTACTGACGCTTTCGGCATTTTATCTGATAGAAAGCTTAGAGAAGATTACGACGGGAAGCTTGATCTCGAGATGAGAGAAAAGGTAAGGACTTTTTGGACTGCTTGTGATACTTGTAGGGTTTTGCATCAGTTTGAGAGAAAGTATTTGGGTCATAAACTTGTTTGTCCTGGTTGTGATAAGAGTTTTAAGGCTGTTGAAGCTGTTCAGAGTGATGGGTCTCAGTCTCAGGAAGATGAAGAAGAAGAAGATAAGACTTTGGGTGATTTTATGTTGAAGAGGAAGAACATTAAGAAGAAGAAGAATGGGAAAGTGGGTTTTGAAAAAGATGAGATTTTTAAGGGTAATGATGAAGTGGGTGATGAAGAAGATGAGACTTTTAGGGGTAATGATGAAGTGGGTGATGCAAAAGGTGAGAGCTTTAAGGGTAATGGTGATGTGGGTGTTGAGAAAAGTGAGAGCTTTAAGGATAATGATGAAGTGGGTATTGTTGGGAGACTGAGGAAGAGAACGCGTTCGATTGGTGAGGTTTTGGAATGTTCTGAATCCAAGAGGGTTGTTGGGAGTGAAGAGGAAACAATGACATTGGCTGAATTTCAATCTAAAGTGAAGACTAAGAGAAAGGACGAGAAAGGGAAGATGAAGGGATTGGAGATTAAGAAGGGTTTTGCGGTCGAGGAGAAGAAGAATGAGGGTTCTGTGAAGAGAAATGGGTTGAGTCTTGAGAGGCATAGGGATACTAGTGGCGAGGAATTAGATGTTATGGCGGTTGCGGATTCGGATTTTTATGATTTTGATAAAGATAGAGTGGAAAGGAGTTTTAAGAAAGGTCAAGTTTGGGCTGTGTATGATGACGATGATGGAATGCCGAGGAGTTATGCTTTGATTGATGAAACTGTTTCAGTGAATCCTTTTAAAGTGATGATTAGTTGGTTGGATTTACAGAACAATGGGGATGGGAAGATTGTTAGTAGGGGGAAATTAGGGTTTCATATACCTTGTGGGAGATTTAAAGTTGCTAAGAAGGTTTCCATAAGTTCTGTAAATGTGTTCTCTCATGTTGTGGATTGCGATCGGGCAGCGCGTCAGGTTTACAAAATTTATCCTAAGAAGGGATCAGTTTGGGCGCTTTATAGTGAGGCGAGTCTTGATGCCGGCGATTGCAATATGTGCTATGATATTGTTGTGTTTTTGACAAGTTACAGTGAGATGAATGGTATGAGCATGGCATTTCTCGAGAAGGTTGATGGTTACAAGACAGTGTTTAAGAGACAAGAGAGTGGGAGTCATGCTGTTAGATTTCTTCGGAAGGATGAATTTGGGCTAATTTCTCATCAGATTCCTGCGAGAAAATGTCCTTGTGATGAGGCTCCTGAATTGTTGAAAGACTGTTGGGAGCTTGATCCGGCTTCACTTCCTTCAAATTTACTTACTATTGGTGGCATAGGTAATTGA 1779 0.4098 MTATTNAEEQEAARLKTIAETKYKTTKNTKSALKYAKRA*RSAPHLQGISDLVTSLNILSSPDFYAVLDVEPTATITTIHKHYKKLSSLLHPNNNHHHVESSQEALKLVTDAFGILSDRKLREDYDGKLDLEMREKVRTFWTACDTCRVLHQFERKYLGHKLVCPGCDKSFKAVEAVQSDGSQSQEDEEEEDKTLGDFMLKRKNIKKKKNGKVGFEKDEIFKGNDEVGDEEDETFRGNDEVGDAKGESFKGNGDVGVEKSESFKDNDEVGIVGRLRKRTRSIGEVLECSESKRVVGSEEETMTLAEFQSKVKTKRKDEKGKMKGLEIKKGFAVEEKKNEGSVKRNGLSLERHRDTSGEELDVMAVADSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRSYALIDETVSVNPFKVMISWLDLQNNGDGKIVSRGKLGFHIPCGRFKVAKKVSISSVNVFSHVVDCDRAARQVYKIYPKKGSVWALYSEASLDAGDCNMCYDIVVFLTSYSEMNGMSMAFLEKVDGYKTVFKRQESGSHAVRFLRKDEFGLISHQIPARKCPCDEAPELLKDCWELDPASLPSNLLTIGGIGN* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1445 591 PRINTS DnaJ domain signature 100 120 IPR001623 -
Tpr2g1445 591 PRINTS DnaJ domain signature 64 82 IPR001623 -
Tpr2g1445 591 PRINTS DnaJ domain signature 82 97 IPR001623 -
Tpr2g1445 591 Pfam Domain of unknown function (DUF3444) 361 559 IPR024593 -
Tpr2g1445 591 CDD DnaJ 62 117 IPR001623 -
Tpr2g1445 591 Pfam DnaJ domain 62 125 IPR001623 -
Tpr2g1445 591 MobiDBLite consensus disorder prediction 237 259 - -
Tpr2g1445 591 MobiDBLite consensus disorder prediction 225 259 - -
Tpr2g1445 591 Gene3D DnaJ domain 54 144 IPR036869 -
Tpr2g1445 591 ProSiteProfiles dnaJ domain profile. 62 128 IPR001623 -
Tpr2g1445 591 SUPERFAMILY Chaperone J-domain 54 127 IPR036869 -
Tpr2g1445 591 SMART dnaj_3 61 120 IPR001623 -
Tpr2g1445 591 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 8 587 - -
Tpr2g1445 591 PANTHER BNAC03G44070D PROTEIN 8 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1445 Tpr-Chr2 17021307 17023487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1445 5 177 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 28.431 9.02e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1445 - - aprc:113869037 655.21