Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1442 ATGGAAGAAGTACTTGTATCTCCTAATGAAGAGGAAGTCAATGAAGAAAATGATAAATGTGATAAAAATTTAGAAGCAAATATGGTCTATGAAGATGAAAAACCTCAAGTTGGAATGATATTTAGCTCTAAAGATGAACTTACAGAGTATTATAAGAGTTATGCTCAGTCTATAGGTTTTGGAGTTAGTAAACTTAGTAGCAAAAATGGAGATGATGGAAAAAAATATTTTACTCTAGCATGTAGTCGTGGAACAAAGTATGTGAGTAAATCAAAGAATCTTTTGAAGTCAAATCCTATAACAAAAACTCAGTGTAAGGCTAGATTAAATGCATGTATTTGTTTAGATGGAACAGTTTCTATTTCAAGAATTGTTCTTGAGCATAATCATGACCTAAGCCCTACCAAAGCACGCTATTTTAGAAGTTGTAAGAATTTGGAACCTCATTTTAAAAAGAGGTTAGAACTCAATGATCAAGCTGGAATAAATGTTAGCAGAAATTTCCGATCTTTGGTTGTTGAAGCAAATGGATATGAGAATCTAACATTTGGTGAAAAGGATTGTCGGAACTATATAGATAAAGTAAGGAGACTGCGACTTGGGAGAGGAGACGCTGATGCGATTCAAAACTATTTTGTTAAAATACAAAAACAAAATAGTGAATTCTATTATGTGATAGACATTGATGATGACGGTCGTTTGCGCAATGTATTTTGGGCTGATGCGAGATGTAGGGCTGCATATGAGTATTTTGGTGAAGTTGTAACATTTGACACTACTTACTTAACAAATAAGTACGACATGCCCTTTGCCCCTTTTGTTGGGGTAAATCACCACGGTCATTCTACGTTGTTGGGTTGTGCTTTATTGTCGAATGAGGATACTAAGACCTTTACTTGGTTGTTCAAAACATGGTCAGAATGCATGAATGGATGTTCTCCAAATGCCATAATTACTGATCAAGACAAAGCCATGAAAAAAGCAATTGAGGTTGTTTTTCCAAAAGCTCGTCACCGCTGGTGTTTGTGGCATATAATGAAAAAGGTTCCAGAAAAGTTAGGCAGACACTCTAATTATGAGTCTATCAAAACATTTTTGCATGATGCTGTATATGATTCTTCGGGTACAAGTGATTTCATGGAAAAGTGGGAAAAAATGATTGAAGATTTTGACCTTGAAGAAAACGAATGGTTGAAGGGGATATTTGATGAAAGAAATCGTTGGGTTCCTGTGTACGTGAGAGACACATTTTGGGCAGGAATGTCAACAACACAAAGAAGTGAAAGTATGAACTCATTTTTTGATGGCTATGTAATTTCAAAGACAACATTGAAGCAGTTTGTTGAACAATATGACAATGCATTGAGAGATAAAGTTGAAAAGGAAAACAAAGCTGATTTTGCTTCATTTAATACAGTCATAGCTTGTCTAAGTCATTTTGGTTTTGAGTCTCAGTTCCAGAAAGCATTCACAAATGCAGAATTTCCAAGAATTTAG 1497 0.348 MEEVLVSPNEEEVNEENDKCDKNLEANMVYEDEKPQVGMIFSSKDELTEYYKSYAQSIGFGVSKLSSKNGDDGKKYFTLACSRGTKYVSKSKNLLKSNPITKTQCKARLNACICLDGTVSISRIVLEHNHDLSPTKARYFRSCKNLEPHFKKRLELNDQAGINVSRNFRSLVVEANGYENLTFGEKDCRNYIDKVRRLRLGRGDADAIQNYFVKIQKQNSEFYYVIDIDDDGRLRNVFWADARCRAAYEYFGEVVTFDTTYLTNKYDMPFAPFVGVNHHGHSTLLGCALLSNEDTKTFTWLFKTWSECMNGCSPNAIITDQDKAMKKAIEVVFPKARHRWCLWHIMKKVPEKLGRHSNYESIKTFLHDAVYDSSGTSDFMEKWEKMIEDFDLEENEWLKGIFDERNRWVPVYVRDTFWAGMSTTQRSESMNSFFDGYVISKTTLKQFVEQYDNALRDKVEKENKADFASFNTVIACLSHFGFESQFQKAFTNAEFPRI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1442 498 Pfam MULE transposase domain 254 348 IPR018289 -
Tpr2g1442 498 Coils Coil 444 464 - -
Tpr2g1442 498 Pfam FAR1 DNA-binding domain 49 133 IPR004330 -
Tpr2g1442 498 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 497 IPR031052 GO:0006355
Tpr2g1442 498 PANTHER OS03G0843700 PROTEIN 9 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1442 Tpr-Chr2 16954955 16956847 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr2g1442 MULE 3.7e-36 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1442 - - cam:101506732 723.391