Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1441 ATGGGCAACAGTGAGATGGATAAAACCACCAAAGAGAAGGAGTCGAAGACGCCTCCACCAATATCACAGGAGCAGCCTTCGACCACCACCACCACCGGTGCAATTAATAATGACTGGGCCAGCTTTCAGGCATATTCTCCTATGCCTCCACATGGATTCATGGCATCAAGTCCCCAAGCTCACCCTTATATGTGGGGTGTCCAGCACATTATGCCTCCTTATGGTACTCCAGCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCCCATCCATCCATGCCTCCGGGATCTTATCCATACAATCCTTATACCATGCCTACTCCAAACGGTGTTGCTGAAGCTTCTGGAAACACTCCTGCCAGCATGGAAACTGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAACATGATTACAGGGAAAAATAATGAACATGGTAAAACAACGGGGACATCTGCTAATGGAATTCATTCAAAGAGTGGTGGTGAAAGTGGAAGTTTTGAAGGTACTAGTGAAGGAAGTGATGCAAATTCTCAGAATGACTCTCAATTGAAATCCGGGGACAGGCGGGATTCTTTTGAAGGTGAACCGTCTCAAAATGGCAGTTCAGCGCATACTTCACAAAATGGAGGACTTAATGCACCTCATACAGTAGTTAATCAAAGTATGCCTGTCCTTCCTATCTCTGCGAGTGGTGCTCCTGGAGCTGTTGCTGGTCCCGCAACAAACTTAAATATAGGAATGGATTATTGGGGCACGCCGACTTCATCCAACATTCCTGCTCTCCGTGGAAAGGTTCCGTCTACTACAGTTGCGGGAGGGGTGGTTACTGGTGGATCACGGGATAGTGTCCAATCACAACTTTGGCTACAGGATGAAAGAGAGCTTAAAAGACAAAGGCGGAAACAGTCAAATAGGGAATCTGCTCGGAGATCCAGGCTGCGCAAGCAGGCTGAGTGCGATGAGCTAGCTCAGCGTGCTGATGTTTTGAAAGAAGAAAATGCTTCCCTCCGACTAGAAGTAAGTCGCATTAGAAGCGATTATGAGCAGCTACTTTCCGAGAATGCAGCCCTCAAGGAGAGACTCGGGGAACAACCTGGAAGCGATCAACACGTGCGTAATGACACTCAACAGAGTGGTCAAACAGAGGATGTGCAGGGTGGTCATTAG 1215 0.4733 MGNSEMDKTTKEKESKTPPPISQEQPSTTTTTGAINNDWASFQAYSPMPPHGFMASSPQAHPYMWGVQHIMPPYGTPAHPYVAMYPHGGIYAHPSMPPGSYPYNPYTMPTPNGVAEASGNTPASMETDGKPPEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTTGTSANGIHSKSGGESGSFEGTSEGSDANSQNDSQLKSGDRRDSFEGEPSQNGSSAHTSQNGGLNAPHTVVNQSMPVLPISASGAPGAVAGPATNLNIGMDYWGTPTSSNIPALRGKVPSTTVAGGVVTGGSRDSVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENASLRLEVSRIRSDYEQLLSENAALKERLGEQPGSDQHVRNDTQQSGQTEDVQGGH* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1441 404 Coils Coil 328 376 - -
Tpr2g1441 404 CDD bZIP_plant_GBF1 313 363 IPR045314 GO:0003700|GO:0006355
Tpr2g1441 404 MobiDBLite consensus disorder prediction 1 35 - -
Tpr2g1441 404 MobiDBLite consensus disorder prediction 372 404 - -
Tpr2g1441 404 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 404 IPR044827 GO:0003700|GO:0006355|GO:0043565
Tpr2g1441 404 MobiDBLite consensus disorder prediction 19 35 - -
Tpr2g1441 404 MobiDBLite consensus disorder prediction 211 225 - -
Tpr2g1441 404 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Tpr2g1441 404 MobiDBLite consensus disorder prediction 1 18 - -
Tpr2g1441 404 MobiDBLite consensus disorder prediction 384 404 - -
Tpr2g1441 404 MobiDBLite consensus disorder prediction 310 331 - -
Tpr2g1441 404 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 404 - -
Tpr2g1441 404 Pfam Disordered region downstream of MFMR 136 275 - -
Tpr2g1441 404 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 315 330 IPR004827 GO:0003700|GO:0006355
Tpr2g1441 404 MobiDBLite consensus disorder prediction 147 198 - -
Tpr2g1441 404 Gene3D - 311 365 - -
Tpr2g1441 404 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 310 373 IPR004827 GO:0003700|GO:0006355
Tpr2g1441 404 Pfam bZIP transcription factor 308 370 IPR004827 GO:0003700|GO:0006355
Tpr2g1441 404 MobiDBLite consensus disorder prediction 116 225 - -
Tpr2g1441 404 SUPERFAMILY Leucine zipper domain 311 367 IPR046347 GO:0003700|GO:0006355
Tpr2g1441 404 SMART brlzneu 308 372 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1441 Tpr-Chr2 16935043 16946698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1441 1 398 bZIP Transcription Factor Family AT2G35530 61.071 1.36e-161 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr2g1441 MFMR_assoc 2.8e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1441 K09060 - gmx:778122 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1441 2 16935043 16946698 Tpr2g1441 2 16935043 16946698 ECH