LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g1425	ATGGGTTATGAAGACAACCCTTATCGTGATGAGGATGGTGAGCCATTGATGGATTACGACGATGTTCAATCCGATCGCGAGGCGACACCGGAGCCACAACAGCTCGACGATTTCGAGGAAGACGTTGATGATTTTCCTAGTCGGGATCGATCACAGACTCCGGTTTACGACACGGATCCATCGAAATCGAAGCCGAGGAAAAGACTGATTAAGAAGAGTGATACCGGGAAACAGTCGGTGGTGGCTCCGCCACCGGAGCTTGAGGATGAGTTGGAGGAGGACCGTTTTCGGGCTAATGAGGAGGAAGGGAGGAAGAGGAAGAAAGGGAAGGATATTGGATCAGGGAAGAAGGAGAAGAGGCTGAAAGGGGAAAAGAGGGTTGGAAGTAGCAGCGGAAAGAGTGGGTCAAAATCTGGGGGTTCGAAGAACGGGTTTGGTGGTAAAGGTGGGAATGATCATGATGGTGAAGTTAAGGAGATGTGGGATACAATTGCCGGAGGAGATTCTGAGGATGATCAAGAGGGTAACAGAAATGTGGATGATGATAACTTTATAGATGACACTGGAGTGGAACCTGCTTTGTATGGTTACGATGAGCCACGGTCTCCTGGTGATGCTCCACAGGCAGAGGAAGGTGATGAGGAGGATGAAATGAAGGATCTTTTCAAGGTGGGTAAGAAAAAGAAGAAGAATGAAAGGAGTCCTGCAGAAATTTCTTTATTAGTTGAGAATGTCATGGCTGAGCTCGAGCTTACAGCAGAAGAGGATGCTGAGCTTAATCGCCATAACAAGCCCGCTATCAATAAACTCAGGAAGTTGCCTCTTCTTACAGAAGTCCTCTCAAAGAAACAACTTCAACTAGAGTTTTTAGATCACGGAGTGCTAGCTTTATTGAAGAATTGGCTTGAGCCACTTCCTGATGGAAGTCTGCCAAATATTAACATAAGGACAGCAATTTTGAAGATTTTGAATGATTTTCCTATAGACCTAGAGCAGTATGATAGAAGAGAACAGCTGAAGAAAAGTGGTCTTGGAAAGGTTATTATGTTTTTATCAAGGTCTGATGAAGAAATCAATCTAAATAGGAAATTAGCCAAGGAATTGGTTGATAAATGGAGCCGACCTATATTTAATAAGAGTACTCGGTTTGAAGACATGCGAAATAGTGAGGATGATAGGGTTCCTTACAGGAGGCCATCGGTTAAAAAGCCAGCAAATAAAGCTGCAGGGATGGCATCTAGAGATGGTGATCTTGATTTGGATCTTTCACAGCCTAGGTCTGGACAGTCGTCTGCCAGACAACTTACATCAAGGCCAGAAGCAACACCTTTGGATTTTGTGATCCGCCCGCAATCTAAAATTGATCCTGATGAAATTAGAGCACGTGCAAAACAATGTTCACAAGACCAGCATCGCATGAAGATGAATAAGAAATTGCAGCAGTTGAGAGCTCCAAAAAAGAAGCAGCTTCAGGCTACAAAGCTGAGTGTGGAAGGTCGTGGTATGGTCAAATACCTATGA	1521	0.4451	MGYEDNPYRDEDGEPLMDYDDVQSDREATPEPQQLDDFEEDVDDFPSRDRSQTPVYDTDPSKSKPRKRLIKKSDTGKQSVVAPPPELEDELEEDRFRANEEEGRKRKKGKDIGSGKKEKRLKGEKRVGSSSGKSGSKSGGSKNGFGGKGGNDHDGEVKEMWDTIAGGDSEDDQEGNRNVDDDNFIDDTGVEPALYGYDEPRSPGDAPQAEEGDEEDEMKDLFKVGKKKKKNERSPAEISLLVENVMAELELTAEEDAELNRHNKPAINKLRKLPLLTEVLSKKQLQLEFLDHGVLALLKNWLEPLPDGSLPNINIRTAILKILNDFPIDLEQYDRREQLKKSGLGKVIMFLSRSDEEINLNRKLAKELVDKWSRPIFNKSTRFEDMRNSEDDRVPYRRPSVKKPANKAAGMASRDGDLDLDLSQPRSGQSSARQLTSRPEATPLDFVIRPQSKIDPDEIRARAKQCSQDQHRMKMNKKLQQLRAPKKKQLQATKLSVEGRGMVKYL*	507

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g1425	506	ProSiteProfiles	TFIIS N-terminal domain profile.	296	379	IPR017923	-
	Tpr2g1425	506	MobiDBLite	consensus disorder prediction	97	127	-	-
	Tpr2g1425	506	MobiDBLite	consensus disorder prediction	149	184	-	-
	Tpr2g1425	506	MobiDBLite	consensus disorder prediction	1	217	-	-
	Tpr2g1425	506	PANTHER	PROTEIN IWS1 HOMOLOG 1	1	506	IPR044204	GO:0009742\|GO:0032784
	Tpr2g1425	506	Pfam	TFIIS helical bundle-like domain	321	376	IPR017923	-
	Tpr2g1425	506	MobiDBLite	consensus disorder prediction	387	419	-	-
	Tpr2g1425	506	MobiDBLite	consensus disorder prediction	1	33	-	-
	Tpr2g1425	506	Gene3D	Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	235	382	IPR035441	-
	Tpr2g1425	506	PANTHER	PROTEIN IWS1 HOMOLOG 1	1	506	-	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	IWS1	Tpr2g1425		Med26	1.3e-12	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g1425	K17498		-	gmx:100801805	775.007