Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1417 ATGGGATCCTGGAACAAAGAAGAGATAACAATGTTTTATGAATCTTATAGAAACCAGGGGAAAGACTGGAAAAAGGTTGCCGCTGATGTAGGCACTAAAACAATTGATATGGTAAAGAGTTTCTATCATTTGAATTGGGCATACCTTTCTCTGCCTTCTGGATTAACTTCTGTTGCTGGACTAATTGCAACGATGGAACGCCGTGGAATTTTTCTGGTAGGGTTCGAATAA 231 0.3939 MGSWNKEEITMFYESYRNQGKDWKKVAADVGTKTIDMVKSFYHLNWAYLSLPSGLTSVAGLIATMERRGIFLVGFE* 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1417 76 Pfam Myb-like DNA-binding domain 2 43 IPR001005 -
Tpr2g1417 76 SUPERFAMILY Homeodomain-like 2 48 IPR009057 -
Tpr2g1417 76 PANTHER LIN-9 3 65 IPR010561 GO:0006351|GO:0017053
Tpr2g1417 76 CDD SANT 3 46 IPR001005 -
Tpr2g1417 76 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 3 65 IPR028306 -
Tpr2g1417 76 Gene3D - 1 57 - -
Tpr2g1417 76 ProSiteProfiles SANT domain profile. 1 46 IPR017884 -
Tpr2g1417 76 SMART sant 1 48 IPR001005 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tpr2g1417 Myb_DNA-binding 5.7e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1417 - - ini:109170106 83.9593