Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1411 ATGGCAGATAGTCCAGTCTCATTTTTATTGGACAGGTTGACTTGGTTACTTCAAGAGGAAGTAAATCTACAAAGAGGCGTCCGTGAAGATGTTCAATACATCAAAGATGAACTCGAACGCCACAAAGCTATCTTAATGGTAGCTGATTCATTGGAAGATAAAGATCCTGAACTCAAAGTATGGGTTAAAAGGGTAAGAGATATTGCTCATGACATGGAAGATGCTATAGATGAATACAATCTCCGCCTTGTCAATCATCGACAAGGTAACAACAATTCTTCTTTTTATAAGATTCTTTTCGCCATTAAGACCATGAAAGGTAGACGTAGAATAGCTTTGAATATTCAAGGAATTAAATCAAAAGTTGAAGTTATCTCGCAAAGACGTCCAATCATATCTGATGTAGCTTCAAGCTCAAGTCAAAGGTTGGTTTCAACAAGACTTGATAGTCAAGGTGATGCCCTTTTGTTAGAAGAAGCTGATTTAGTTGGTATTGAAGAGCCAAAGAAGCAACTTACTGATTTGCTTTTCAAAGATGAATCAAATAGAGCTGTGATTTCAATTTATGGCATGGGAGGTTTAGGGAAAACAACCTTAGCCAAACAAGTCTATGATGATCTAAAAATCAAGAAACGTTTCAGGATTCATGCTTGGGTTAATCTTTCTCAATCTTTCAAAATGGAAGAGTTGTTGAAGGATCTTGTTCAACAGCTTTATAGTGTTATTGGTAAACCAGTTCCAGAAGCAGTTGGAATGATGAAAATTGAAAAGGTGAAAGAGTTGATCAAGAATTTGCTTCAACAAAGTAGGTATCTAATTGTGCTTGATGATGTGTGGAATGTGAATGTTTGGGATGCTGTGAAGCATGCTTTGCCTAATAACAACCGCGGAAGTAGAGTTATGCTTACCACTCGCAAGAAAGATATAGCTTTGTATTCTTGTGCTGAATTAGGTAAGGATTTTCACCTTCAATTCTTACCTGAGCAAGAAGCTTGGTCACTTTTTTGTAGGAAGACATTTCAAGGTAGTAATTACTCGTGTCCTCCTCATCTTGAAGAAGTTTGTAGGAAGATCTTGAAATTGTGTGGAGGGTTGCCACTAGCAATTGTGGCAATCAGTGGTGCTTTGGCTACACGAGAAAGATCGAACATAGAAGAGTGGCAGATAGTTTGCAGAAGTTTTGGATCTGAAATTAAAGGGAATGACAAATTGGAGGATATGAAGAAAGTACTTTCCTTAAGTTTCAATGAGTTGCCTTACTATCTTAAATCGTGTTTGTTGTATTTAAGCCTCTTTCCTGAATTTCACGCTATCGAGCATATGAGATTGATTCGGTTGTGGGTATCTGAAGGATTTGTAAATGGTGAAGATGGTAAGACAGTAGAGGAAGTTGCAGATAGTTACCTCAAAGAGCTTTTGAACAGGAGTTTGCTTCAAGTGGTAGAAAAGACCAGTGATGGAAGGATGAAAACGTGTCGAATGCATGACCTTCTAAGGGAAATTGTTAATTTGAAGTCAAGGGATCAGAACTTTGCAACAATAGCCAAAGATAAATTCATGGTATGGCCGGAACGAGTTCGTCGTTTATCGATTGTAAGTTCATCATATAAAGTACTGCAACAAAATAGGACAACATTCCAACTTAAGTCTCTGCTAATGTTTGCATTATCACATTCACTCAATCATTTTTCTATCCATGAATTAAGCACCTTTGGTCTTAAGTTGCTCAGAGTGTTAGACTTGCAAGATGCACCTTTGGAGGATTTTCCTGCTGAAATTATCAACCTATACCTTCTGAAATATCTAAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAGGTTCCATTAAGAAGTTGCAGAACCTAGAGACATTGGATCTTAAACACACTTATGTCACTGAATTGCCTACTGAAATTGCGGAGCTGAAACGATTACGCCATCTCCTTGTGTATCGTTACGAGATTGAATCCTATGCTCATTTCCACGCAAAGCATGGATTCAAAGTGGCTGCACCTATAGGAAACATGGAATCATTGCAAAAGCTTTGTTTTATAGAGGTAGATCAAGGAAGTAGAGCATTGATGGTTGAGTTAGGAAAACTTACTCAACTTAGGAGGCTAGGCATTAGAAAAATGAGGAAAGAAGATGGTGCTGCTTTGTGTTTATCTATTGAGAAGATGATCCATCTTAGATCACTCTCCATAACTGCAATAAAAGAAGATGAGATAATCGATATTCACGATATTTCAAAGCCTCCTCAGTGTCTTCAACAGGTATACTTGAGTGGATGTTTAGAGAAGTTTCCACAATGGATAAAATCTTGCAATAATTTAGTCAAAGTTTTCTTAAAATGGAGCAGGTTAAAGGAGGATCCACTGGTGTATCTTCAAGGTTTACCAAATCTTCGACATCTTGAGTTTCTTCAAGTTTATGTTGGCGAGACATTGCATTTCAACGCAGAAGGTTTTCCGAGTCTAAAGGTGGTAGGCCTTGATGATTTAAAAGGACTGAAATCTATGATAATTGAGAAAGGAGCAATGCAAGGTCTTAAAAAGTTGATCATCCAACGATGCGGTTCGTTCAAGCATGTACCATTAGGCATTGAACATCTAACTAAGCTAAAAACAATTGAGTTCTTTGATATGCCTGATGAATTGGTTAAGGCACTGCTTCCAAATGGAGGCAAAGATTATTGGAGAGTACAAAATGTTCCAACAGTTTATTCCACTTATTGGAGGGAAGGTGGTTGGGATGTTTATTCATTAGAGACTTTTGGGGAGAGAGAGACTGATTCCAATCATAGTAGTGCTAAGAGGACTCTTGAGCTTCCTACTCTTTGGAAGGTTTAA 2850 0.3772 MADSPVSFLLDRLTWLLQEEVNLQRGVREDVQYIKDELERHKAILMVADSLEDKDPELKVWVKRVRDIAHDMEDAIDEYNLRLVNHRQGNNNSSFYKILFAIKTMKGRRRIALNIQGIKSKVEVISQRRPIISDVASSSSQRLVSTRLDSQGDALLLEEADLVGIEEPKKQLTDLLFKDESNRAVISIYGMGGLGKTTLAKQVYDDLKIKKRFRIHAWVNLSQSFKMEELLKDLVQQLYSVIGKPVPEAVGMMKIEKVKELIKNLLQQSRYLIVLDDVWNVNVWDAVKHALPNNNRGSRVMLTTRKKDIALYSCAELGKDFHLQFLPEQEAWSLFCRKTFQGSNYSCPPHLEEVCRKILKLCGGLPLAIVAISGALATRERSNIEEWQIVCRSFGSEIKGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSLFPEFHAIEHMRLIRLWVSEGFVNGEDGKTVEEVADSYLKELLNRSLLQVVEKTSDGRMKTCRMHDLLREIVNLKSRDQNFATIAKDKFMVWPERVRRLSIVSSSYKVLQQNRTTFQLKSLLMFALSHSLNHFSIHELSTFGLKLLRVLDLQDAPLEDFPAEIINLYLLKYLSLKNTKVKSIPGSIKKLQNLETLDLKHTYVTELPTEIAELKRLRHLLVYRYEIESYAHFHAKHGFKVAAPIGNMESLQKLCFIEVDQGSRALMVELGKLTQLRRLGIRKMRKEDGAALCLSIEKMIHLRSLSITAIKEDEIIDIHDISKPPQCLQQVYLSGCLEKFPQWIKSCNNLVKVFLKWSRLKEDPLVYLQGLPNLRHLEFLQVYVGETLHFNAEGFPSLKVVGLDDLKGLKSMIIEKGAMQGLKKLIIQRCGSFKHVPLGIEHLTKLKTIEFFDMPDELVKALLPNGGKDYWRVQNVPTVYSTYWREGGWDVYSLETFGERETDSNHSSAKRTLELPTLWKV* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1411 949 Gene3D - 325 414 IPR042197 -
Tpr2g1411 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 429 IPR027417 -
Tpr2g1411 949 Gene3D - 150 315 IPR027417 -
Tpr2g1411 949 Gene3D - 415 505 IPR036388 -
Tpr2g1411 949 Gene3D - 5 112 - -
Tpr2g1411 949 CDD RX-CC_like 2 126 IPR038005 -
Tpr2g1411 949 Pfam Rx N-terminal domain 6 93 IPR041118 -
Tpr2g1411 949 Gene3D Ribonuclease Inhibitor 533 891 IPR032675 -
Tpr2g1411 949 PRINTS Disease resistance protein signature 185 200 - -
Tpr2g1411 949 PRINTS Disease resistance protein signature 265 279 - -
Tpr2g1411 949 PRINTS Disease resistance protein signature 362 376 - -
Tpr2g1411 949 PRINTS Disease resistance protein signature 617 633 - -
Tpr2g1411 949 Pfam NB-ARC domain 166 416 IPR002182 GO:0043531
Tpr2g1411 949 SUPERFAMILY L domain-like 493 886 - -
Tpr2g1411 949 PANTHER DISEASE RESISTANCE PROTEIN RP 156 911 IPR044974 GO:0006952
Tpr2g1411 949 PANTHER DISEASE RESISTANCE PROTEIN RP 1 136 IPR044974 GO:0006952
Tpr2g1411 949 PANTHER OS08G0539900 PROTEIN 156 911 - -
Tpr2g1411 949 PANTHER OS08G0539900 PROTEIN 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1411 Tpr-Chr2 16493219 16496514 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1411 163 630 WRKY Transcription Factor Family AT5G45050 22.154 1.90e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1411 K13457 - gmx:100305458 1448.34