Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1410 ATGAAAAATGGAAGCTTAGAACAATGGTTTCATCCTGAGATTTTAAGTGCAGAGCCTCCAACAACATTGGACCTCAGTCATAGATTAAACATCATTATTGATGTTGCTTCTGAATTACATTATCTTCATCAAGAATGTGAGCAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTCGATGAAGATATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTCGTCTCAGTCATCGACGGCACCTCTCATAAATACTCCAGTACAATTGGAATAAAAGGAACTGTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACATGTGGTGACATGCATAGCTTTGGAATCCTTATGTTGGAAATGCTTACTGGTAAAAGACCCACTGATGAAGCTTTTGAAGATGGACAAAATCTGCATAACTTTGTGGGGAATTTATTTCATGATAATCTTATAAAAATTTTGGGCCCAAATCTTATATCAAGAGATGCAGAAGTAGCAATAGAAGATTGA 531 0.3785 MKNGSLEQWFHPEILSAEPPTTLDLSHRLNIIIDVASELHYLHQECEQLVIHCDLKPSNVLLDEDMVAHVSDFGIARLVSVIDGTSHKYSSTIGIKGTVGYAPPEYGMGSEVSTCGDMHSFGILMLEMLTGKRPTDEAFEDGQNLHNFVGNLFHDNLIKILGPNLISRDAEVAIED* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1410 176 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 169 - -
Tpr2g1410 176 Gene3D Transferase(Phosphotransferase) domain 1 1 175 - -
Tpr2g1410 176 SUPERFAMILY Protein kinase-like (PK-like) 1 144 IPR011009 -
Tpr2g1410 176 SMART serkin_6 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1410 176 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Tpr2g1410 176 ProSiteProfiles Protein kinase domain profile. 1 176 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1410 176 Pfam Protein kinase domain 21 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1410 176 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1410 Tpr-Chr2 16489778 16492230 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1410 1 149 Receptor kinase-like Gene Family AT3G47580 55.263 7.03e-51 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1410 Pkinase 1.4e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1410 - - mtr:MTR_5g025930 298.13