Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1408 ATGAAACCTTATATTTTCTTATTACCCATGTCTTGGTACGCATACCTTCATTTGCTTGATCTTATTACCTTAACCTTAATGTGTTTTGGTCCAAACAGAACTTTGACAATGGAACTAGGAAACCAAACCGATCATTTGGCTTTGCTTCAATTCAAGCAACTAATATCTAATGATCCATATGGCATCCTAGATTCTTGGAATAGTTCAACCCACTTTTGCAACTGGCAAGGAATCATATGCAATGCCAAGCATCAAAGAGTTACGAAGTTGAAGTTGGAAGGATACAAGTTGCATGGATCCATATCTCCATATGTTGGCAATCTCTCTCATATGAGATTCCTTAACCTTAGAAACAACAAATTCTACGGAAACATTCCACAAGAATTGGGCCGTTTGTCACGATTACGGTATTTCCTTCTACTCAACAACTTATTGGCAGGGGAATTTCCTATAAACTTGACAAAGTGCTATGAGCTCAAAACCATAGACTTACAAGGAAACAATTTGATTGGCAAAATACCTAGTCAAATTGGTTCTCTTCAAAAGCTTCAAGTTTTCTATATCGGAAGAAACAATTTATCTGGAAAAATCCCACCATCCATAAGTAATCTATCATCCATTGTTATTTTTTCGATGGGTGAAAATGACTTGGTGGGAAATATTCCGCGAGAAATGTGTTTCCTAAAACAGTTGAAGTTAATAGCAGTGCATGTCAATAAATTGTCGGGTACATTTCCTTCTTGTCTTTATAATATGTCATCTCTTATTATGATCTCAGCTGCATACAATAATGTTAATGGAACTCTTCCACCCAATATGTTTCACACTCTTCCCAATCTCCAAATGTTTTTAATCGGAGAAAATAATTTCTCAGGTCATATACCCACTTCCATTGCAAATGCTTCTACTTTGACAAAATTTGATATTGTTAAAAACCATTTTCTCGGACAACTTTCAAATCTAGGTAAGCTACAAAGTGTGAGGGTGCTAAGTTTGGGTTACAACAATTTAGGAGACAATTCCACAAAGGATTTGGAGTTTTTAAACTCATTGACAAATTGTAGTAAGTTGCAAATGCTCCAATTGTCAAATAATAATTTTGGAGGTAGTTTGCAAAATTCTATAGGCAATTTGTCCACCACACTTGATCAATTACATTTCGGGGTTAATCAAATATATGGACAAATTCCTATAGAATTAGGAAATCTAATTAACTTGAGTCTCTTGACATTGGACTATAATAAATTCCAAGGAACAATTCCAACTACTTTTGGAAAATTTCGAAAGATACAAATATTAGAATTGTACGGAAACAATTTATCAGGGGTTATACCATCTTTCATAGGCAACCTTAGTCAAGTTTATGCTTTGGGACTAGATGAAAATATGTTTGAAGGTAATATTCCTCCAAATATTGGAAATTGTCAAAAATTACAATACTTAACTCTTTCACAAAACAACCTCAAAGGAGTCATACCCTTAGAGATTTTTAACATTTCATCATTATCAAACACACTAGACTTGTCACATAACTCATTGAGTGGTAGCTTACCAAAAGAAGTGGGTATGCTAAAAAATATTGATTGGTTAGATGTCTCTGAGAATCATTTGTCGGGTGACATTCCTGGAACCATTGGTGAATGCATAAGTTTAGAATATCTTAATTTGAAAGGGAACTCCTTTAGAGGAATCATACCATCCTCTTTGGCATCACTCAAAGGTCTTCAAAGTTTAGATCTATCTAGAAATCAATTGACTGGGGCAATTCCAAAAAGTTTGCAAAATTTTTCTTTCCTAAAACATTTCAATGTTTCTTTCAACATGTTGGAAGGTGAGGTACCGACAGATGGTGTATTTGGAAATGCAACTCAAGTGGCAATTATTGGAAACAATAAGCTTTGTGGTGGTATTTCACAGCTGCATCTACCACCATGCCTTATCAAGGGTAGGAAACATGCAAAACACCATAAATTCAGGTTGATAGCAGTGATCGTTAGTGTGGTTTCTTTTCTTCTCATACTTTCATTTATCATAACTATGTACTGGATGAGGAAAAGAAATCTAAAACGACATTTGGATTCACCAACAATTGATCAACTAGCTAAGGTTTCGTACCAAGACTTAGATCGAGGAACGGATGGTTTCTCAACTAGAAATTTGATCGGATCAGGAACTTTTGGTTCTGTTTACAGAGGAAATCTTGTTTCAGAAGATAATGTTGTTGCTGTGAAAGTCCTTAAACTCCAAAAGAAGGGAGCTCGCAAGAGTTTCTTTGTTGAATGTAATGTGCTCAGAAACATTAGACACCGGAATTTAGTTAAGGTTTTAACATGTTGTTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCTGTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGATTTTAAATGCAGAGACTCCAACATCACTGGACCTCAGTCTTAGATTAAACATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATGAAGAATGTGAGCAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGAAGACATGGTTGCTCATGTGAGTGATTTTGGCATATCAAGACTTGTCTCATCCATTTGTGGTAATAGTAGTACAATTGGAATCAAAGGGAGTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACGTGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACCGGTAGAAGACCCACTGATGAAGTTTTCAAAGATGGTCAAAATCTGCATAACTTTGTTGCAATTTCATTTCCTGATAATCTTGGAAATATTTGTTACCCACATATTATATCAAGAGATGCAAAAGTGACAGAAGATGGAAGCATTGAAAATTTGGAGTGCTTAGTTTCTCTTTTTAGGATTGGACTTAGTTGTTCAATGGAATCATCGAAGGAAAGAATGAATATTGTGGATGTCACTAGAGACCTTAGCATAATCAAAAAGACCTATCTCACTGGTTTTCGCACTCATAATTAG 3060 0.3539 MKPYIFLLPMSWYAYLHLLDLITLTLMCFGPNRTLTMELGNQTDHLALLQFKQLISNDPYGILDSWNSSTHFCNWQGIICNAKHQRVTKLKLEGYKLHGSISPYVGNLSHMRFLNLRNNKFYGNIPQELGRLSRLRYFLLLNNLLAGEFPINLTKCYELKTIDLQGNNLIGKIPSQIGSLQKLQVFYIGRNNLSGKIPPSISNLSSIVIFSMGENDLVGNIPREMCFLKQLKLIAVHVNKLSGTFPSCLYNMSSLIMISAAYNNVNGTLPPNMFHTLPNLQMFLIGENNFSGHIPTSIANASTLTKFDIVKNHFLGQLSNLGKLQSVRVLSLGYNNLGDNSTKDLEFLNSLTNCSKLQMLQLSNNNFGGSLQNSIGNLSTTLDQLHFGVNQIYGQIPIELGNLINLSLLTLDYNKFQGTIPTTFGKFRKIQILELYGNNLSGVIPSFIGNLSQVYALGLDENMFEGNIPPNIGNCQKLQYLTLSQNNLKGVIPLEIFNISSLSNTLDLSHNSLSGSLPKEVGMLKNIDWLDVSENHLSGDIPGTIGECISLEYLNLKGNSFRGIIPSSLASLKGLQSLDLSRNQLTGAIPKSLQNFSFLKHFNVSFNMLEGEVPTDGVFGNATQVAIIGNNKLCGGISQLHLPPCLIKGRKHAKHHKFRLIAVIVSVVSFLLILSFIITMYWMRKRNLKRHLDSPTIDQLAKVSYQDLDRGTDGFSTRNLIGSGTFGSVYRGNLVSEDNVVAVKVLKLQKKGARKSFFVECNVLRNIRHRNLVKVLTCCSSTDYKGQEFKAVVFDYMKNGSLEQWLHPEILNAETPTSLDLSLRLNIIIDVASALHYLHEECEQLVIHCDLKPSNVLLDEDMVAHVSDFGISRLVSSICGNSSTIGIKGSVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDEVFKDGQNLHNFVAISFPDNLGNICYPHIISRDAKVTEDGSIENLECLVSLFRIGLSCSMESSKERMNIVDVTRDLSIIKKTYLTGFRTHN* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1408 1019 Gene3D Transferase(Phosphotransferase) domain 1 797 1014 - -
Tpr2g1408 1019 SUPERFAMILY Protein kinase-like (PK-like) 692 1005 IPR011009 -
Tpr2g1408 1019 Pfam Protein kinase domain 717 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1408 1019 SMART LRR_typ_2 180 204 IPR003591 -
Tpr2g1408 1019 SMART LRR_typ_2 524 548 IPR003591 -
Tpr2g1408 1019 SMART LRR_typ_2 403 426 IPR003591 -
Tpr2g1408 1019 SMART LRR_typ_2 572 595 IPR003591 -
Tpr2g1408 1019 SMART LRR_typ_2 108 132 IPR003591 -
Tpr2g1408 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Tpr2g1408 1019 PANTHER OS04G0122200 PROTEIN 29 1013 - -
Tpr2g1408 1019 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Tpr2g1408 1019 Gene3D Ribonuclease Inhibitor 252 645 IPR032675 -
Tpr2g1408 1019 PANTHER LRR RECEPTOR-LIKE KINASE 29 1013 - -
Tpr2g1408 1019 Pfam Leucine Rich Repeat 182 204 IPR001611 GO:0005515
Tpr2g1408 1019 SUPERFAMILY L domain-like 42 337 - -
Tpr2g1408 1019 SMART serkin_6 715 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1408 1019 Gene3D Ribonuclease Inhibitor 155 243 IPR032675 -
Tpr2g1408 1019 ProSiteProfiles Protein kinase domain profile. 715 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1408 1019 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Tpr2g1408 1019 SUPERFAMILY L domain-like 381 635 - -
Tpr2g1408 1019 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Tpr2g1408 1019 Gene3D Ribonuclease Inhibitor 43 154 IPR032675 -
Tpr2g1408 1019 Gene3D Phosphorylase Kinase; domain 1 696 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1408 Tpr-Chr2 16455964 16461624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1408 41 1017 Receptor kinase-like Gene Family AT3G47570 44.960 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1408 Pkinase 3.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1408 - - mtr:MTR_5g025930 1439.48