Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1404 ATGGCAGATAGTTCGGTATCATTTTTATTGGACAAACTGTCTTGGTTACTTCAAGAAGAAGTGAACCTACAAAAAGGGGTCCGTGAAGATGTTCAATACATCAAAGACGAACTCGAACGCCACAAAGCAATCTTAATGGTAGCTGATTCATTGGAACACAAAGATCCTGAACTCAAAGTATGGCTTAAAAGTGTAAGAAATATTGCTCAAGACATGGAAGATGCTATAGATGAATACAATCTTCGTCTTGTTGATCATCATCAACAAGGTAAGAACAATTCTTCTATTCATAAGCTTGCTTTTGGGTTCAAGACTATGAAAGCTAGACACAGAATAGCTACAGATATACAAGGAATCAAATCCAAAGTTGAAAATATCTCTCATGGACGTCCAAACATATCTGGTGTAGGTTCAAGCTCAAGTCAAAGACGTTCATCAAGGCTTGATAGTCAAGGTGATGCCCTTTTGCTAGAGGAAGCTGATTTAGTTGGAATTGAAGAACCAAAGAAGCAGCTTTGTGATCTGCTTTTCAAAGATGAATCAAATAGAGCTGTGATTTCAATCCATGGTATGGGAGGTTTAGGGAAGACAACATTGGCAAAACAAGTCTATGAAGATCCAAAAGTAAAGAAATATTTCAGGATTCATGCTTGGGTTAATCTCTCACAATCTTTCAACATGGAAGAGATACTGAAAGACCTTGCACAACAACTCCATAATGTTATTGGAAAACCAGCTCCAGAATCAATTGGAATGATGAAAATTGACAATCTGAAAGAGTTTATCAAGAACTTTCTTCAGAGAAGTAAGAAATATCTAATTGTGCTTGATGATGTGTGGCATGTGAATGTATGGGATGCTGTGAAGCTTGCTTTGCCTAATAACAACTGCGGCAGTAGAGTGATTCTTACCACGCGCAAGAAAGATGTAGCTTTGTATTCTTGTGCAGAATTAGGTAAGGATTTTCACCCTGAATTCTTACCTAGGCAAGAAGCTTGGTCTCTTTTTTGTAGGAAGACATTTCAAGGTAACTCATGTCCTCCTCATCTTGAAGAAGTTTGTAGGAAGATCTTGAAATTGTGTGGAGGGTTGCCATTAGCAATTGTGGCAATCAGTGGTGCTTTGGCTACAAGAGAAAGATCAAACATAGAAGAGTGGAACATGGTTTGCAGAAGTTTTGGTTCAGAAATTGAAGGCAATGACATATTGGAAGTTATGAAAAAAGTACTTTCCTTAAGTTTCAATGAATTGCCTTACTATCTTAAATCATGTTTGATGTATTTAACCGTCTTCCCGGAATTTCACGCTATCGAGCATATGAGATTGATTCGACTGTGGATAGCTGAAGGGTTTGTGAAAGATGAAGATGGTAAGACACCGGAGGAAGTTGCAGATAGTTACCTTAAGGAGCTTTTGAACAGAAGTTTAATCCAAGTGGTAGAAAAAACAAGTGATGGAAGGATGAATACATGTCGAATGCATGGTCTTACGAGGGAAATTGTTAATTTGAAGTCAAGAGATCAGAACTTTGCAACAATAGCCAAAGATAAAGACATGGTATGGCCGGAACGAGTTCGCCGTTTATCGGTGATAAATTCATCACAAAATGTATTTCAACAAAATAAGACTACATTTCAACTTAGGTCTCTGCTAATGTTTGCAGTATCAGACTCACCCAATAATTTTTCTATCCATGACGTATGCACCTCCAGTGGTGCTAAGTTGCTCACTGTGTTAGACTTGCAAGATGCACCTTTGGAGGCTTTTCCTGCTGAAATTGTCAACCTTTACCTTCTGAAGTATCTAAGTTTGAAGAATACAAAGGTTAAAAACATTCCAGGATCCATTAAAAAGTTGCAATACTTGGAGACATTAGATCTTAAACACACTGGTGTCACTGAATTGCCGGCTGAAATTGCAGAGCTGAAACGATTACGCCATCTTCTGGTGTATCGTTACGATATTGAATCATATGCTCATTTCCACTCAAGGCATGGCTTCAAGGTGGCTGCGCCTATAGGAAACATGCTATCTTTGCAAAAGCTTTGTTTCATAGAGGTAGATCAAGGAAGTGGAGCCTTGATGGTTGAGTTAGGAAAACTTACTCAACTTAGGAGGCTAGGCATTAGAAAAATGAGGAAAGAAGATGGTGCTGCTTTGTGTTCATCGATTGAGAAAATGGTCAATCTTACATCACTATCTATAACTGCAATAAATGAAGATGAGATAATTGATATTCACAGCATTTCAAAGCCTCCTCAGTATCTTCAGAAGTTATACTTGAGCGGACGTTTAGAGAAGTTTCCACAATGGATCAAATCTTGCAAGAATTTAGTCAGAGTTTTCTTAAAATGGAGCAGGTTAAAGGAGGATCCTCTGGTGTACCTTCAAGATTTGCCAAATCTTCGACATCTTGAGTTTCTTCAAGCTTATGTTGGTGAGACATTGCAATTCAATGCAAAAGGGTTTCCAAGTCTGAAGATGTTAGGCCTTGATGATTTAAAAGGACTGAAATACATGATAATTGAGGAAGAAGCAATGCAAGGTCTTAAAAAGTTGGTCATTCAGCAATGTGGCTCATTCAAGAATGTACCATTAGGCATTGAATACTTAACTAAGCTAAAAGCAATTGAGTTATTTGATATGCCTATAGAATTGATTATGGCACTGCGTCCAAATGGAGGCGAAGATTATTGGAGAGTACAGAATATTCCAACAATTTATTCTACTTATTGGAGGGATCATGGTTGGGATGTTTATCCAATAAAGACTTTTGGGGAGATAGAGAGTGATATCGATCATAGTATTGCATTGAGGACTCTTCAGCTTCCTACTCTTTCGAAGGTTTAA 2850 0.3793 MADSSVSFLLDKLSWLLQEEVNLQKGVREDVQYIKDELERHKAILMVADSLEHKDPELKVWLKSVRNIAQDMEDAIDEYNLRLVDHHQQGKNNSSIHKLAFGFKTMKARHRIATDIQGIKSKVENISHGRPNISGVGSSSSQRRSSRLDSQGDALLLEEADLVGIEEPKKQLCDLLFKDESNRAVISIHGMGGLGKTTLAKQVYEDPKVKKYFRIHAWVNLSQSFNMEEILKDLAQQLHNVIGKPAPESIGMMKIDNLKEFIKNFLQRSKKYLIVLDDVWHVNVWDAVKLALPNNNCGSRVILTTRKKDVALYSCAELGKDFHPEFLPRQEAWSLFCRKTFQGNSCPPHLEEVCRKILKLCGGLPLAIVAISGALATRERSNIEEWNMVCRSFGSEIEGNDILEVMKKVLSLSFNELPYYLKSCLMYLTVFPEFHAIEHMRLIRLWIAEGFVKDEDGKTPEEVADSYLKELLNRSLIQVVEKTSDGRMNTCRMHGLTREIVNLKSRDQNFATIAKDKDMVWPERVRRLSVINSSQNVFQQNKTTFQLRSLLMFAVSDSPNNFSIHDVCTSSGAKLLTVLDLQDAPLEAFPAEIVNLYLLKYLSLKNTKVKNIPGSIKKLQYLETLDLKHTGVTELPAEIAELKRLRHLLVYRYDIESYAHFHSRHGFKVAAPIGNMLSLQKLCFIEVDQGSGALMVELGKLTQLRRLGIRKMRKEDGAALCSSIEKMVNLTSLSITAINEDEIIDIHSISKPPQYLQKLYLSGRLEKFPQWIKSCKNLVRVFLKWSRLKEDPLVYLQDLPNLRHLEFLQAYVGETLQFNAKGFPSLKMLGLDDLKGLKYMIIEEEAMQGLKKLVIQQCGSFKNVPLGIEYLTKLKAIELFDMPIELIMALRPNGGEDYWRVQNIPTIYSTYWRDHGWDVYPIKTFGEIESDIDHSIALRTLQLPTLSKV* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1404 949 Pfam NB-ARC domain 166 415 IPR002182 GO:0043531
Tpr2g1404 949 SUPERFAMILY L domain-like 493 890 - -
Tpr2g1404 949 PRINTS Disease resistance protein signature 185 200 - -
Tpr2g1404 949 PRINTS Disease resistance protein signature 266 280 - -
Tpr2g1404 949 PRINTS Disease resistance protein signature 361 375 - -
Tpr2g1404 949 PRINTS Disease resistance protein signature 617 633 - -
Tpr2g1404 949 Gene3D - 5 113 - -
Tpr2g1404 949 MobiDBLite consensus disorder prediction 127 148 - -
Tpr2g1404 949 Pfam Rx N-terminal domain 6 94 IPR041118 -
Tpr2g1404 949 PANTHER OS08G0539900 PROTEIN 1 140 - -
Tpr2g1404 949 PANTHER OS08G0539900 PROTEIN 156 905 - -
Tpr2g1404 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 428 IPR027417 -
Tpr2g1404 949 Gene3D - 414 499 IPR036388 -
Tpr2g1404 949 Coils Coil 62 89 - -
Tpr2g1404 949 PANTHER DISEASE RESISTANCE PROTEIN RP 156 905 IPR044974 GO:0006952
Tpr2g1404 949 PANTHER DISEASE RESISTANCE PROTEIN RP 1 140 IPR044974 GO:0006952
Tpr2g1404 949 CDD RX-CC_like 2 127 IPR038005 -
Tpr2g1404 949 Gene3D Ribonuclease Inhibitor 500 889 IPR032675 -
Tpr2g1404 949 Gene3D - 151 316 IPR027417 -
Tpr2g1404 949 Gene3D - 327 413 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1404 Tpr-Chr2 16406646 16410507 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1404 186 630 WRKY Transcription Factor Family AT5G45050 21.532 4.06e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1404 K13457 - gmx:100305458 1410.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1404 2 16406646 16410507 Tpr2g1404 2 16406646 16410507 ECH