Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1397 ATCATAACAGCATTCAAAATTTCAACAATAGCTGCAAATTTCAACTTCAAAATGCCCCAAAACACCATCACTCACCCTCACTGGTATTCATCAAAAACTGGAATTTACAACAGTATACACTCTCCTAGGAACATTCCAACCGACCCTTTTCTCGACCTTGTTTCCTTCATTTTTTCTCACCCTCATGATGGGGTTTTGGCCCTTATTGATCACTCAACTGGGTCTTCTATTTCTTACTCAAAGTTGCTACCTTTAGTCAAATCAATGGCTTCTGGTCTTCATAAAATGGGTGTTTCACAACGTGATGTTGTTTTGCTTCTACTTCCAAATTCAATTTACTATCCCATTGTACTATTAGGTGTTATGTATCTAGGTGCTGTTGTTACACCATTGAATCCTCTAAGTAGTGCTGGCGAAATTCGTAAGCAAGTTAATGATAGTGGTGCAAGTTTTGCTTTTACTATACCTGAAAATGTTAAGAAACTAGAGCCATTAGGCATGCCTATTATTGTTGTGCCAGAAAATGAAAAGGTTTTGAAGCATGAATCTTTCTCATGTTTTTTTAACCTGATTTATGGTAACTTCGATTTATCTCAAAAGCCGGTTATTAAACAAGAAGACAATGCTGCTATATTGTACTCTTCCGGTACAACAGGTATGAGCAAAGGAGTCGTTTTAACTCATAGAAATTTTATTGCTATGGTTGAGCTTTTTATGAGGTTACAAGCTTCTCAATATGAGTACCCTAGTTCCAAAAAGGTGTATCTAGCTGTTGTGCCAATGTTCCATATATATGGTTTATCGCATTTTGCCATGGGATTATTGTCGTTGGGCTCAACAATCGTAGTAATGAGGAAATTTGACATTGATGAGGCTATTACGGCAATTGGTAAATATAATGTTACACATTTTAATGTTGTTCCACCGATATTGTCGGCATTGACAACGAAGGCAAAGGGTGTTAAGGGAAGTAAGTTGCAGAGTTTAAGACAGGTCACTTGCAGTGCAGCACCTTTGAGCATAGCAGCCATCAATGATTTTGTTCAAGCTTTCCCTAATGTTGATTTTATACAGGGTTATGGAATGACTGAGTCGGGAGGAACAGTAGCACACGGCTTCAATACAGAAAAGTTTCACAACTATTCTTCACTAGGATTGTTAGCTCCAAACATGGAGGCAAAAGTAGTAGACTGCAATAGTGGTGCATTTTTGCCTCCAGGCAGCAGTGGTGAGATTTGGTTGAGAGGGCCTTCAATTATGAAAGGATACTTGAATAATAAGGAAGCTACAATGTCAACAATTGATCAAGATGGTTGGCTACATACTGGAGATATAGTTTATTTTGATCAGGATGGATATTTATATTTGTCTGATCGATTGAAAGACATGATCAAATACAAGGGCTTTCAGATTGCTCCTGGTGATTTAGAAGCTGTGTTAATTTTGCATCCAGAAATAGTTGATGTCGCCGTTACAAGTGCCAAGGATGAAGAAGCTGGGGAGATTCCAGTGGCATTTGTGGTTAAGAAGACTGGAAGTGTACTTTCTCTAAAGGACGTTATCGATTATGTTGCGAAACAGGTTGCTCCACACAAGAAGGTTCGGAAAGTTGTCTTCACCGACAAAATACCGAGATCTGCGACTGGAAAGATCCTCAGAAGGCAACTCAGAAATTACTTAACTTCTAAACTCTAA 1695 0.3847 IITAFKISTIAANFNFKMPQNTITHPHWYSSKTGIYNSIHSPRNIPTDPFLDLVSFIFSHPHDGVLALIDHSTGSSISYSKLLPLVKSMASGLHKMGVSQRDVVLLLLPNSIYYPIVLLGVMYLGAVVTPLNPLSSAGEIRKQVNDSGASFAFTIPENVKKLEPLGMPIIVVPENEKVLKHESFSCFFNLIYGNFDLSQKPVIKQEDNAAILYSSGTTGMSKGVVLTHRNFIAMVELFMRLQASQYEYPSSKKVYLAVVPMFHIYGLSHFAMGLLSLGSTIVVMRKFDIDEAITAIGKYNVTHFNVVPPILSALTTKAKGVKGSKLQSLRQVTCSAAPLSIAAINDFVQAFPNVDFIQGYGMTESGGTVAHGFNTEKFHNYSSLGLLAPNMEAKVVDCNSGAFLPPGSSGEIWLRGPSIMKGYLNNKEATMSTIDQDGWLHTGDIVYFDQDGYLYLSDRLKDMIKYKGFQIAPGDLEAVLILHPEIVDVAVTSAKDEEAGEIPVAFVVKKTGSVLSLKDVIDYVAKQVAPHKKVRKVVFTDKIPRSATGKILRRQLRNYLTSKL* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1397 564 Gene3D - 37 461 IPR042099 -
Tpr2g1397 564 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 21 563 - -
Tpr2g1397 564 Pfam AMP-binding enzyme 65 466 IPR000873 -
Tpr2g1397 564 Pfam AMP-binding enzyme C-terminal domain 476 550 IPR025110 -
Tpr2g1397 564 ProSitePatterns Putative AMP-binding domain signature. 211 222 IPR020845 -
Tpr2g1397 564 CDD 4CL 45 556 - -
Tpr2g1397 564 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 563 - -
Tpr2g1397 564 SUPERFAMILY Acetyl-CoA synthetase-like 60 560 - -
Tpr2g1397 564 Gene3D - 462 562 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1397 Tpr-Chr2 16332937 16335235 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1397 19 564 Monolignol Biosynthesis Gene Families AT4G19010 57.609 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1397 K01904 - gmx:100804808 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1397 2 16332937 16335235 Tpr2g1397 2 16332937 16335235 ECH