Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1385 ATGAGCGTTCAACCACCGCCGCAGCTGATGTGGCCACCATCAAATCATCCACCGTTCACAGTATCCCAATGGCAAGAGCTAGAACATCAAGCTCTCATCTTCAAGTATCTCAAAGCTGGTGTATCTGTTCCTCCAGACCTTCTTTTACCTATTAGGAAAAGTCTCCAATTGATGTCACACCCATCTCTGGGTTATTATGGTAAAAAAATTGACCCAGAACCAGGTAGGTGTAGAAGAACAGATGGAAAAAAATGGAGATGTGCTAAGGATGCTCATCCTGATTCTAAGTACTGTGACCGTCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTTCTTCTTGTTCTTCTCAATCTTCTTCAGTTACAGTTTCTAGTACTTCACAACAAATTGGTTCTTCTATTGGAACTGCTTCTGCTACTGTTACTGCTTCTGCTGCTGTTACTGCTGCTTCAACCTTTCATACTCTTCCTTTGCATACAAATGGTACTCGTGAAGGTTTAGCTTTCACTCTTGGGAACACCATACCCCACATGGACCCTATGCTTCTTTCTCATCAAGGTTCTAAGAAATCTTATAGGTTTGGACTGAACACGGAAGCAGAAGAGCACGACCTTGTACAGAAAGATTTCGGAACTGTGAAGTATCAAGGCTACGACTTCACTTCAGACGACACCTGGTATAATAACATGTCACAGATTCCATCAAACAATGTGTCAGAATCCAGGACCGGTTCTACCATGGTTAACAAAGGCAACTACTTCCAACAGCAGCGAGCACGAGAGCCTGAGCAGCTGTTTAACCTCGACACTGCAAGGTCCAAGGAAATCGTCTTTAACAGCCAGTTAGGTAATTTTAAACAGGAATATCAATCTTCACAATCTCTCTTCAGTGACTGGCAGTGGAAGAAAGATTTAGCCTCATCTGGCATGGAGTATAAGCCAAGCAAGGATTTTAATACTAATCCAGATATCAATGCAGATTGA 996 0.4267 MSVQPPPQLMWPPSNHPPFTVSQWQELEHQALIFKYLKAGVSVPPDLLLPIRKSLQLMSHPSLGYYGKKIDPEPGRCRRTDGKKWRCAKDAHPDSKYCDRHMIRRRYRSRKPVESSSCSSQSSSVTVSSTSQQIGSSIGTASATVTASAAVTAASTFHTLPLHTNGTREGLAFTLGNTIPHMDPMLLSHQGSKKSYRFGLNTEAEEHDLVQKDFGTVKYQGYDFTSDDTWYNNMSQIPSNNVSESRTGSTMVNKGNYFQQQRAREPEQLFNLDTARSKEIVFNSQLGNFKQEYQSSQSLFSDWQWKKDLASSGMEYKPSKDFNTNPDINAD* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1385 331 PANTHER GROWTH-REGULATING FACTOR 1 330 - -
Tpr2g1385 331 Pfam QLQ 18 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tpr2g1385 331 ProSiteProfiles QLQ domain profile. 18 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
Tpr2g1385 331 MobiDBLite consensus disorder prediction 113 130 - -
Tpr2g1385 331 PANTHER - 1 330 IPR031137 GO:0005634|GO:0006351|GO:0032502
Tpr2g1385 331 MobiDBLite consensus disorder prediction 109 130 - -
Tpr2g1385 331 Pfam WRC 72 114 IPR014977 -
Tpr2g1385 331 ProSiteProfiles WRC domain profile. 71 115 IPR014977 -
Tpr2g1385 331 SMART QLQ_2 17 53 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1385 Tpr-Chr2 16161812 16164913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1385 17 114 GRF Transcription Factor Family AT3G13960 58.182 4.63e-40 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Tpr2g1385 WRC 5.8e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1385 - - gmx:100809947 421.779