Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1381 ATGTTTGAATGCATAAGAAGCTGTACGACGGTGGGAGATGAGGATGAAGGTGGTGTCCGTCAGACTCAGAGTGGCACGCCGACCACTAAACCAGCCGTCAAAAGCCTGACTGCACAGATTAAAGACATGGTGCTGAAGTTAAAGGGTGCTGACAAAAGTGGACTGAAATCATCTACCAATTCTGAAGGGGTTCAATACCCTTACATGGGAGGATTAGGCTCAGGCTCAACTCCTCTGTGGGACGCTAATTTAGCCGGTGGAAGATCAGACCAAGGGTTTATAGGGGGAACTAGTGGTAACACAACCCCTAGAGTGCAAGAGCCAGTTGTAGCAGTGGTGGAGGAGGTGGATGGAAACAAAGAGTGGGTGGCACAGGTGGAGCCAGGGGTTGATGTTACCTTTGTGTCTCTTCCTGATGGTGGAAATGATCTCAGAAGAATTCGCTTCAACCGAGACATGTTTGATAAGTGGCAAGCTCAAGTATGGTGGGGTGAGAACTTTGACAGACTAAGGGAGCTTTATAATGTCCAGACATTCAACCGTCAAGCTCTTAACAACATTACTCCTCCACCATCTGAAGATGAGAGAGATTCTGCTGCTTATTGGAGGCTTCATACTGGAGGAGATATCCCTATGGCTGGATGGTTCAATGACTCAGCAGAAAGGAATCAGTACTATAATCCTGCAAGATTCACTATGGGACAAGGAAGCAGTAGCCAGCAACAAATTCATGCAGCTGGGTCATCCATGGAAGCATCAAGGACTTCTTCTAAAGATGAGCTTTCCTTCAGCAATGCAAGTGAAATTGAATCTGAATGGTTGGAGCAAGTTGAGCCTGGAGTGTTTGTTACAATCAGGCAGTTACCTGATGGGAGCAAGGAGATTCGTCGTATCAGATTCAGCCGACAGAGGTTTGGAGATGAAGAAGCAAGGAAATGGTGGGAGGACAACAGAGAAAGAGTGAATGCTGAATTCCTGTGA 981 0.4679 MFECIRSCTTVGDEDEGGVRQTQSGTPTTKPAVKSLTAQIKDMVLKLKGADKSGLKSSTNSEGVQYPYMGGLGSGSTPLWDANLAGGRSDQGFIGGTSGNTTPRVQEPVVAVVEEVDGNKEWVAQVEPGVDVTFVSLPDGGNDLRRIRFNRDMFDKWQAQVWWGENFDRLRELYNVQTFNRQALNNITPPPSEDERDSAAYWRLHTGGDIPMAGWFNDSAERNQYYNPARFTMGQGSSSQQQIHAAGSSMEASRTSSKDELSFSNASEIESEWLEQVEPGVFVTIRQLPDGSKEIRRIRFSRQRFGDEEARKWWEDNRERVNAEFL* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1381 326 MobiDBLite consensus disorder prediction 16 32 - -
Tpr2g1381 326 ProSiteProfiles BRX domain profile. 120 175 IPR013591 -
Tpr2g1381 326 MobiDBLite consensus disorder prediction 233 261 - -
Tpr2g1381 326 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 326 - -
Tpr2g1381 326 Pfam Transcription factor BRX N-terminal domain 26 47 IPR027988 -
Tpr2g1381 326 Pfam Transcription factor regulating root and shoot growth via Pin3 270 323 IPR013591 -
Tpr2g1381 326 Pfam Transcription factor regulating root and shoot growth via Pin3 120 174 IPR013591 -
Tpr2g1381 326 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 326 IPR044532 -
Tpr2g1381 326 MobiDBLite consensus disorder prediction 12 32 - -
Tpr2g1381 326 ProSiteProfiles BRX domain profile. 271 326 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1381 Tpr-Chr2 16122701 16128384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1381 1 326 Major Intrinsic Protein MIP AT1G31880 47.324 3.07e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1381 - - mtr:MTR_5g026970 373.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1381 2 16122701 16128384 Tpr2g1381 2 16122701 16128384 ECH