Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1380 ATGGAGAAGAGGATCACCCTGGTTCAGACCGTCGCCACCGCCGGCGTTTTCTCCGCCATTTCCTTCTGGTATGGATTCATGTTCGGGAGAGAATCCTCTCGCAAAGAGCTTTCTCAACTAATCGAAGATCTCCGTCGCGAAAACTTACTGGTTACTAAGGATATTATCAAAATTGCTGATTTTGGCCTCGCCCGTGAGATCAGCTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTTACATCTATGGCTCCAAAGTTGACATATGGGCAATGAGTGCGATAATGGCCGAGCTGTTCTCTCTTCGACCTCTTTTTCCAGGAGCCAGTGAGGCAGATGAGATCTACAAAATATGTGGTGTGATAGGCAATCCAACTACTGAATCATGGGCCGATGGACTCAAACTTGCAAGGGATATTAATTATCAGTTTCCACAGCTTGCTGGCGTAAATCTTTCTGCTTTGGTACCATCTGCAAGTGATCATGCAATCAGCCTTATCCAATCACTTTGCTACTGGGATCCCTGCATGAGGCCAACGGCTTTAGGGGCCCTTCAACATCCTTTCTTTCAGAGTTGTTTTTACATTCCTCCATCCCTTCGCTCAAGAGCAGTAGCGGCGAGAACTCCTCCACCTGGAACCAGGGGTGCACTGGTGGATGATCAACAATGGGTCAAGAGATATCCGGGTGCTCTACCCAATTCAAAGCCCACCAATTATTTTCCATCTCCAAAAGTACAACCTTCTTCAGGTGTACAGCGGAAGCTGGATATGGTAAATCAGGATGGAGTTAAGAATGAAAAATCAATGAAGACTACTACACAATCAAAATATCGACTGCCAGGAAAGGAAAGTCCAACTTCTATGAACAAAGGAAGAACTACACGTGGGGTTTCAGAAACAACTGAGAGGTTGGCCAATATGTCTATTGGTAATCAAAGACAAGCCATGGGGCAACCCCGCCCTCCAATGAAAGCTGGAGTTAATTAA 1023 0.4633 MEKRITLVQTVATAGVFSAISFWYGFMFGRESSRKELSQLIEDLRRENLLVTKDIIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYIYGSKVDIWAMSAIMAELFSLRPLFPGASEADEIYKICGVIGNPTTESWADGLKLARDINYQFPQLAGVNLSALVPSASDHAISLIQSLCYWDPCMRPTALGALQHPFFQSCFYIPPSLRSRAVAARTPPPGTRGALVDDQQWVKRYPGALPNSKPTNYFPSPKVQPSSGVQRKLDMVNQDGVKNEKSMKTTTQSKYRLPGKESPTSMNKGRTTRGVSETTERLANMSIGNQRQAMGQPRPPMKAGVN* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1380 340 Pfam Protein kinase domain 43 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1380 340 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 42 331 - -
Tpr2g1380 340 MobiDBLite consensus disorder prediction 276 327 - -
Tpr2g1380 340 MobiDBLite consensus disorder prediction 272 340 - -
Tpr2g1380 340 Gene3D Transferase(Phosphotransferase) domain 1 39 207 - -
Tpr2g1380 340 SMART serkin_6 5 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1380 340 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1380 340 SUPERFAMILY Protein kinase-like (PK-like) 43 205 IPR011009 -
Tpr2g1380 340 Coils Coil 34 54 - -
Tpr2g1380 340 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 42 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1380 Tpr-Chr2 16110239 16120493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1380 40 208 Core Cell Cycle Gene Families AT3G48750 37.791 7.88e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Tpr2g1380 Pkinase 5.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1380 K08829 - gmx:100810150 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1380 2 16110239 16120493 Tpr2g1380 2 16110239 16120493 ECH