Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1366 ATGGCACATGATGGTGATGATCCTTTTTATGTCAAAGTTATTGTCCTACTTATTGCCATTGCTACAGGAGCATTAACTGTTGTTTCAGTGTACCATGTCATAGCCATTTGGTTTTGCCACCAAGAAAGAACCACCACAAATCAAAACTCACCGCAGCACGGTGCCGCGAGCCTCAACGGAAGCACATCCATATCAATAGCTGACCTAATTCCAGCACACAAGTATCACAAGAGAAATAAAGTCGGTGTGGCTTCAGATGACGAAGGTGGCACATGTGCTGTGTGTTTGGGAGATTTTGAGGAGGGCGAGGAGTTGAGAACTATGCCTGAGTGCTTGCATTCTTTTCATGTACCTTGTATTGACATGTGGCTCCATTCGCATACGAGTTGTCCCATTTGTCGCGCTAGTGCCGCCCCTTCGCCCGCAATGAATATTGAACATCAACACATGATTGATATGAGACATACGGCTCCAATTGCTATCGTGTAAAGTTGATTGGTACAATGGTGA 510 0.451 MAHDGDDPFYVKVIVLLIAIATGALTVVSVYHVIAIWFCHQERTTTNQNSPQHGAASLNGSTSISIADLIPAHKYHKRNKVGVASDDEGGTCAVCLGDFEEGEELRTMPECLHSFHVPCIDMWLHSHTSCPICRASAAPSPAMNIEHQHMIDMRHTAPIAIV*S*LVQW* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1366 167 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 156 IPR044675 -
Tpr2g1366 167 SUPERFAMILY RING/U-box 84 139 - -
Tpr2g1366 167 Pfam Ring finger domain 91 134 IPR001841 -
Tpr2g1366 167 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 3 156 - -
Tpr2g1366 167 SMART ring_2 92 133 IPR001841 -
Tpr2g1366 167 ProSiteProfiles Zinc finger RING-type profile. 92 134 IPR001841 -
Tpr2g1366 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 141 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1366 Tpr-Chr2 15925084 15925593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1366 15 135 C3H Transcription Factor Family AT5G17600 37.594 3.35e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1366 - - aip:107639941 171.785