Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1364 ATGGCAAATGATGATGGTGATCCTATTTTTGATTACAGCAATGTTATTATTGAACTTGTTTTTTTGGCTGCAGTTATATTTATTGTTAGAACATGCTACCGTTTCATAGCCGTTTGTTTTCGTCACCAAGAACGAACCACCACGCACCAAAACCCACCACAACCAACGTGGTATGCCGCGTCGCTGACCCTCAATGAAAGAACATCCTCATCAGTTGTACATGAAATTCCAACACACAAGTACCACAGGAGAAATAAAGTTGACATGGTTTCGGATGATGATAGTGGTACGTGTGCCGTGTGTTTGGGAGATTTTGAGGAGGGGGAGGAATTGAGGACTATGCCTGAGTGCTTGCACTCTTTTCATGTACTGTGTATTGACATGTGGCTCCATTCACATTTGAGTTGCCCTATTTGTCGCGCTAGTGCCGCCCCTTTGCCGGTGGTGCACAAACATCATTGCGTCGTAGATACGAGGAATATGGTCCCACTTGCTATCGTGCAAAATGAAATATGTCCACGGAGAGTAGATATTGTATATATATAA 546 0.4322 MANDDGDPIFDYSNVIIELVFLAAVIFIVRTCYRFIAVCFRHQERTTTHQNPPQPTWYAASLTLNERTSSSVVHEIPTHKYHRRNKVDMVSDDDSGTCAVCLGDFEEGEELRTMPECLHSFHVLCIDMWLHSHLSCPICRASAAPLPVVHKHHCVVDTRNMVPLAIVQNEICPRRVDIVYI* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1364 181 SUPERFAMILY RING/U-box 81 146 - -
Tpr2g1364 181 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 2 169 - -
Tpr2g1364 181 ProSiteProfiles Zinc finger RING-type profile. 98 140 IPR001841 -
Tpr2g1364 181 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 169 IPR044675 -
Tpr2g1364 181 Pfam Ring finger domain 97 140 IPR001841 -
Tpr2g1364 181 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 145 IPR013083 -
Tpr2g1364 181 SMART ring_2 98 139 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1364 Tpr-Chr2 15922418 15922963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1364 19 144 C3H Transcription Factor Family AT1G04360 31.250 6.57e-20 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1364 - - aprc:113870478 140.198