Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1363 ATGGCAAATGATGATGATGATCATCCTATTTACAACAACATCATTGTCCTACTTATTGTTGTGGGTTCAGCTGCATTTGTTGTTTGCTCAATTTACCGTGTTATCGCCATTTGGTTTTGTAACCAACAAAGCACCACCACAGATCAAAACCTCCCACAACCACCACCGCGGTTTGCCAACCTCGGCGAAAGCACATCCTCATCAGTAGTACACCTAATTCCAACACACAAGTACCGCAAGAGAAATAAACCCGACGTTGTTGCAGATGATGACGGTGACACATGTGCCGTGTGTTTGGGAGATTTTGAGGAGGGTGAGGAGTTGAAAACTATGCCTGAGTGCTTGCACTCCTTTCATGTACCGTGTATTGACAAGTGGCTCAATTCGCATTCTAGCTGCCCCATTTGTCGTGCCAGTGCCAGTGCCGCCCCTTCCCCGGCAGTGAATGAACAACAGCACAGGATAGATATGAGCCATAATCTGGTTCCAGTTGCTATCATGCAAAGGGGATTATGGTGA 519 0.4663 MANDDDDHPIYNNIIVLLIVVGSAAFVVCSIYRVIAIWFCNQQSTTTDQNLPQPPPRFANLGESTSSSVVHLIPTHKYRKRNKPDVVADDDGDTCAVCLGDFEEGEELKTMPECLHSFHVPCIDKWLNSHSSCPICRASASAAPSPAVNEQQHRIDMSHNLVPVAIMQRGLW* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1363 172 Pfam Ring finger domain 93 137 IPR001841 -
Tpr2g1363 172 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 168 IPR044675 -
Tpr2g1363 172 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 2 168 - -
Tpr2g1363 172 SUPERFAMILY RING/U-box 89 141 - -
Tpr2g1363 172 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Tpr2g1363 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 142 IPR013083 -
Tpr2g1363 172 SMART ring_2 95 136 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1363 Tpr-Chr2 15920348 15920972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1363 16 153 C3H Transcription Factor Family AT5G17600 31.293 2.92e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1363 - - aprc:113870478 148.673