Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1359 ATGTCCCTTCTCAGCAGATTCTTCTACAAAAGACCCCCAGATGGTTTACTTGAATTCATCGATAGAGTTTACGTTTTCGATTCATGTTTCTCAACAGAAGCATTACCAGATGGAATGTATCAGCTATATCTTCACGAAATTGTGACTGAATTACATGAAGAGTTTCCAGAATCTTCGTTTTTAGCTTTCAATTTTCGTGAGGGAGAGAAACGTAGTGATTTTGCTGAGATAATGTGTGATTATGATGTTATTGTTATGGATTATCCTAAACAATATGAGGGTTGTCCTCTTTTACCACTTTCTCTTGTTCAGCATTTTCTTCGTGTTTGTGAGAGTTGGCTTTTACTTGGTAATCATCAAAATGTGATTTTATTTCATTGTGAGAGAGGAGGTTGGCCACTTTTGGCTTTTTTATTAGTAAGTTTGTTGATTTTTAGAAGGGTTCATAGTGGTGAACGTAGGACACTTGATATGGTTCATAGAGAAGCACCTAAGGGTTTGTTGCAGTTGTTGTCGCCTTTGAATCCTTTGCCTTCGCAGCTTCGTTATATTCAATATGTCGCGCGGAGGAATATTGCTCCTGAGTGGCCTCCACCTGAGAGGGCTTTGTCTTTGGATTGTGTTATTCTTAGGGGGATTCCTAGTTTTGATTCGTCTAATGGATGTAGGCCAATGTTTAGGATTTTCGGGAGGAATTTGCTTAGTAGAGGTGGACTATCTACTCAAATGATTTATAACATGCACAAGAAGAAACATTTGAGGCATTATCGCCAGGTAGACTGTGATGTGATTAAGATTGATATTCAATGTTTAGTGCAAGGAGATGTGGTTTTGGAGTGTGTCCATTTGGATTTGGATCCGGAAAGGGAAGTGATGATGTTTCGTGTGATGTTCAATACAGCGTTTATTCGATCCAACATATTGATGCTGAACACTGAAAACTTGGACATTCTTTGGGATTCGAAGGAGCGGTATCCGAAAAGCTTTCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAACATAAGTCCTCAGAGAGCTCCGACAGAGACAGCCATTTTGAATGGCGAGGAGAAAGGTGGATTACCCATTGAAGCATTTTCAAGAGTTCAAGAACTTTTTAATGGAGTGGATTGGGTTGACAGCGGTGATGCTGCAGCAGTGTGGCTGCTTAGACAGCTTACTGTCTTAAATGATGCCAAAGAGTTTTCGAGGTTGCAAGGTAAAGTAAGTTGGTTTTCGTCACCAGCTGACTCTGAAGAAGAAAATAATGAATCAAGTGTTGCTGATAGTTCAGATGAGGCCTCTGATGTTACTCCCAATTCTTTTGCTGATCCTTCAAAATTATTGACACCCGACACCCCTGATTTGGATCATTTATCTTTGGAAAACAATGGTCGAAATTCTGTAAATCTCACTTCAAAAATGTCTGATCAGTTATTGACTAAAAATGCTGCTGGTCCACCTCCACCTCCACCCCCTCCCCCTTTCATGGCCAGCAATGCTAGCAGTGATTCCACATTGCCTTCACCTCCTTCTTCAGGACCTGTACATACAAGTTCAGTCCCATTACCTCCACCCCCACCACCTCCTCCCGGATTTTCTCAAACAGGTTCAACCCCACAACCTCCGCCTCCACCTCCCCCTCCTCCCGGTCCTGTACGAACAGGTTCAATCCCACCACCACCACCTCTTCCAGGTACTGTACAAATAGGTTCATCCCTGCCCCCTCCACCTCCACCTTCTCCTGGTGTTACTTGGTCAGCCCCACCACCTCCACCTCCTCCAGGTCTTACACAAATAGGTTTAACCCCGCCGCCGCCACCACCTCCTCCTCCAGTTCCGGTACGAGCAGGTTTTGCCCCGCCACCTCCACCACCTCCTCCAGCTCCCATACGAACAGGTTCAGCTCCGCCACCTCCACCACCTCCTCCAGGTTCAGTACAAACAGGTTCTGCCCCACCACCCCCACCACCTCCAGGATCTACACGAATAGGATCAGTTCCACCACCTCCTCCGCCCCCTCCAGGTTCTACACAAACAAGATCATCCCCACCACCTCCACCACCACCTCCAGGCCCTGCACGAATAGGATCAGCCCCACCACCTCCCCCACCTCCTCCAGGTCCTGCACGAACAAGTTCAGCTCCACCACCTCCACCACCTCCTCCAGGTGCACGGACAGGTTCAGCTCCACCACCTCCCCCACCTCCTCCAGGTGCACGAACAGGTTCAGCTCCACCTCCACCACCCCCACCAGGTTCTGTTCGAGCAGGTTCAGCCCCACCACCTCCACCTCCTCCAGGTGTACGGACGGGTTCAGCTCCACCAGCACCAAAGCCTCCAAATGCTCCTCCTCCACCACCACCTGGTCGTGGTTCGGTGCCGGCACCTCCACTTACTGCAGGCAAGGCCTCTAGTGTGCCTCCACCACTAGGCAAAGCTTCTTTAACAACAACAAATGTGGGAAGAGGTCGTGGCACTGGTGCTATTGCTGCTAAGAAAACTTTGTTAAAGCCCCTACATTGGGTGAAAGTTTCTCGAGCAGCACAAGGGAGTCTATGGGCTGATTCACAGAAACAAGGCAGTGGTTCAAGGGCCCCTGAAATAGACATATCGGAACTCGAGACCCTGTTTTCAGCAGCATCTATTTCTGATGGAAATAGTACTAATGGTGGAGTCCGGCGTGGTTCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGCAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAGTGCAGTTTTGGCATTGGATTCTGGTGTTCTGGATATTGATCAAGTTGAGAATCTCATAAAGTTCTGTCCCACCAAGGAAGAGATGGAGATATTGAAGAACTATGCTGGGAACAAGGATATGCTTGGGAAGTGTGAGCAGTTTTTTATGGAGCTGATGAAGGTTCCACGAGTAGAAGCCAAGTTAAGAGTGTTTGCTTTTAAAATCACCTTTTCTGCTCAGGTGAGCGATTTAAGGATAAATTTGAATACAATCAACGATGCAACCAGAGAGGTCAAAGAGTCGGTAAAATTGCGTCAAATAATGCAGACTATTCTTACGTTGGGCAATGCTTTGAATCAGGGAACAGCACGAGGATCAGCAGTAGGATTCAAATTGGACAGCCTTCTCAAATTATCTGATACCCGTGCAAGAAATAATAAAATGACTTTGATGCACTATTTGTGTAAGCTTCTTGCCGAGAAAATGCCAGAATTGATAGATTTTGACAAGGATCTTGTGCATTTAGAAGGTGCTTCTAAGATCCAACTAAAAGCATTAGCTGAAGAAATGCAAGCTGTGCATAAAGGTTTGGAGAAAGTTGAGCAAGAACTAACTGCTTCTGAAAATGATGGTGCTATATCTTCAGGATTTCGCAAGGTGTTGAAGAATTTTCTTGATTTTGCTGAAGCTGATGTGAGGTCACTTATATCATTGTATGCCGATGTGGGAAGAAATGCTGATTCTTTGTCCCAATACTTTGGGGAGGATCCAGCTAGGTGCCCCTTTGAGCAAGTGACACAAATACTTGTTGTCTTTGTAAAGACCTTCAACAAGTCAAGGGAGGAGAACGAAAGGTTAGCAGATGCTGAGAAGAAGAAATTAGAGAAAGAAGCCATGAAGGACAAGGCAACAAATAACATCCATTCTAAAAAAGATGTTCGATAG 3720 0.4538 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEALPDGMYQLYLHEIVTELHEEFPESSFLAFNFREGEKRSDFAEIMCDYDVIVMDYPKQYEGCPLLPLSLVQHFLRVCESWLLLGNHQNVILFHCERGGWPLLAFLLVSLLIFRRVHSGERRTLDMVHREAPKGLLQLLSPLNPLPSQLRYIQYVARRNIAPEWPPPERALSLDCVILRGIPSFDSSNGCRPMFRIFGRNLLSRGGLSTQMIYNMHKKKHLRHYRQVDCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNTENLDILWDSKERYPKSFRAEVLFGEVENISPQRAPTETAILNGEEKGGLPIEAFSRVQELFNGVDWVDSGDAAAVWLLRQLTVLNDAKEFSRLQGKVSWFSSPADSEEENNESSVADSSDEASDVTPNSFADPSKLLTPDTPDLDHLSLENNGRNSVNLTSKMSDQLLTKNAAGPPPPPPPPPFMASNASSDSTLPSPPSSGPVHTSSVPLPPPPPPPPGFSQTGSTPQPPPPPPPPPGPVRTGSIPPPPPLPGTVQIGSSLPPPPPPSPGVTWSAPPPPPPPGLTQIGLTPPPPPPPPPVPVRAGFAPPPPPPPPAPIRTGSAPPPPPPPPGSVQTGSAPPPPPPPGSTRIGSVPPPPPPPPGSTQTRSSPPPPPPPPGPARIGSAPPPPPPPPGPARTSSAPPPPPPPPGARTGSAPPPPPPPPGARTGSAPPPPPPPGSVRAGSAPPPPPPPGVRTGSAPPAPKPPNAPPPPPPGRGSVPAPPLTAGKASSVPPPLGKASLTTTNVGRGRGTGAIAAKKTLLKPLHWVKVSRAAQGSLWADSQKQGSGSRAPEIDISELETLFSAASISDGNSTNGGVRRGSNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLSAVLALDSGVLDIDQVENLIKFCPTKEEMEILKNYAGNKDMLGKCEQFFMELMKVPRVEAKLRVFAFKITFSAQVSDLRINLNTINDATREVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELIDFDKDLVHLEGASKIQLKALAEEMQAVHKGLEKVEQELTASENDGAISSGFRKVLKNFLDFAEADVRSLISLYADVGRNADSLSQYFGEDPARCPFEQVTQILVVFVKTFNKSREENERLADAEKKKLEKEAMKDKATNNIHSKKDVR* 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1359 1239 MobiDBLite consensus disorder prediction 412 449 - -
Tpr2g1359 1239 Coils Coil 1202 1231 - -
Tpr2g1359 1239 MobiDBLite consensus disorder prediction 1209 1239 - -
Tpr2g1359 1239 ProSiteProfiles Formin homology-2 (FH2) domain profile. 827 1227 IPR015425 -
Tpr2g1359 1239 PANTHER FORMIN-J 1 734 - -
Tpr2g1359 1239 PANTHER FORMIN-J 731 1231 - -
Tpr2g1359 1239 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 338 IPR035892 -
Tpr2g1359 1239 MobiDBLite consensus disorder prediction 515 795 - -
Tpr2g1359 1239 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Tpr2g1359 1239 Pfam Formin Homology 2 Domain 832 1201 IPR015425 -
Tpr2g1359 1239 MobiDBLite consensus disorder prediction 489 820 - -
Tpr2g1359 1239 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 187 IPR029021 -
Tpr2g1359 1239 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Tpr2g1359 1239 Gene3D Formin, FH2 domain 828 1212 IPR042201 -
Tpr2g1359 1239 MobiDBLite consensus disorder prediction 499 514 - -
Tpr2g1359 1239 SMART it6_source 481 1237 IPR015425 -
Tpr2g1359 1239 ProSiteProfiles C2 tensin-type domain profile. 200 338 IPR014020 -
Tpr2g1359 1239 SMART PTEN_C2_2 198 337 IPR014020 -
Tpr2g1359 1239 Coils Coil 1108 1128 - -
Tpr2g1359 1239 MobiDBLite consensus disorder prediction 428 447 - -
Tpr2g1359 1239 Gene3D - 197 341 - -
Tpr2g1359 1239 SUPERFAMILY Formin homology 2 domain (FH2 domain) 902 1230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1359 Tpr-Chr2 15855922 15869614 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1359 1 434 FH2 protein (formin) Gene Family AT1G31810 77.011 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1359 - - mtr:MTR_5g026645 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1359 2 15855922 15869614 Tpr2g1359 2 15855922 15869614 ECH