Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1351 ATGTACGGTGGTGGAGGAGTCGGAGACGATGATCTGGCCGCTCGCTTAGGGATGATACCGCCGTCGCTACTAATTCCGACGACGTCGGTGAGAGATGAGAGGCTTCCAACTCAGCTGCAGTGGAGTCAGCAGGAAACGAGAGAGTTCATAGCGATAAGAGCAGAGCTTGAGAGAGACTTCACTGCTTCGAAGAGGAACAAGACGCTTTGGGAAGTGGTGAGTTCAAAGATGAGGGAGAGAGGGTATAGAAGAAGTCCTGAACAATGTAAATGCAAGTGGAAGAATCTTGTTAATCGCTATAAGGGAAAAGAGACATCTGATCCAGAGCATGGCAGACAATGTCCATTTTTCGAAGAGTTGCATGCAGTTTTTACTGAAAGAGCACATAACATGCAACGGTTACTTCTTGAATCTGAAACTCGTTCAGCTCAAACAAAGAAAGGAGTGAAAAGGATAAGAAGTGGAGATCGATCCTCAGAGGAAATCTCAGAAGATGATGAGGACGTTGAAGATGACAGTGAAGAGGAGAGACCTGCGAGAAGCAATACTCGTAAAAGGAAAGCTGGCAAAATTGCAACGGAGAAGTCTTCAAGAGCAAACAATAGTAATATTCAGGAAATGCTCAAGGAATTTTTCCAGAACCAACTAAGGATGGAGATGCAGTGGAGGGAAATGATGGAAAGACGTGCACATGAAAGACAGTTGTTTGAACAGGAATGGCGACAGTCAATGGAAAAGCTTGAGAGGGAGAGATTAATGATTGAACAGGAATGGAGGGAGAGAGAAGAGCATAGGAGACTGAGGGAGGAGAGTAGAGCAGAGAGAAGGGACGCTTTGTTGACGACCCTTTTAAACAAACTCATTCATGAATCTAACTAA 879 0.4482 MYGGGGVGDDDLAARLGMIPPSLLIPTTSVRDERLPTQLQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGYRRSPEQCKCKWKNLVNRYKGKETSDPEHGRQCPFFEELHAVFTERAHNMQRLLLESETRSAQTKKGVKRIRSGDRSSEEISEDDEDVEDDSEEERPARSNTRKRKAGKIATEKSSRANNSNIQEMLKEFFQNQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQEWREREEHRRLREESRAERRDALLTTLLNKLIHESN* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1351 292 CDD GT1 40 104 - -
Tpr2g1351 292 Pfam Myb/SANT-like DNA-binding domain 40 122 IPR044822 -
Tpr2g1351 292 Gene3D - 41 102 - -
Tpr2g1351 292 ProSiteProfiles Myb-like domain profile. 41 97 IPR001005 -
Tpr2g1351 292 MobiDBLite consensus disorder prediction 175 193 - -
Tpr2g1351 292 PANTHER - 31 290 - -
Tpr2g1351 292 SMART sant 37 99 IPR001005 -
Tpr2g1351 292 Coils Coil 237 257 - -
Tpr2g1351 292 MobiDBLite consensus disorder prediction 143 160 - -
Tpr2g1351 292 PANTHER - 31 290 - -
Tpr2g1351 292 MobiDBLite consensus disorder prediction 136 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1351 Tpr-Chr2 15783318 15786013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1351 25 292 Trihelix Transcription Factor Family AT2G38250 44.649 2.48e-50 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr2g1351 Myb_DNA-bind_4 2.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1351 - - gmx:100812635 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1351 2 15783318 15786013 Tpr2g1351 2 15783318 15786013 ECH