Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1350 ATGAAACCTTGTATTTTCTTATTACCTATGTCTTGGTATGTATATCTTCATTTGCTTAATCTTTTTACCTTAACCTTAATGTGTTTTGGTTCAAATAGAACTCTGACAATGGAACTAGGAAACCAAACTGATCATTTGGCTTTGCTCCAATTCAAGCAACTAATATCTAATGATCCAAATGGTATCTTAGATTCTTGGAATAGTTCAACTCACTTTTGCAAATGGCATGGAATCATATGCAGTCCCAAGCATCAAAGAGTTACAAAGTTGAAGTTGGAAGGATACAAGTTGCATGGATCCATATCTCCATATGTTGGCAATCTCTCACATATGAGATTCCTTGACCTTAGAAACAATAGCTTCTACGGAAACATTCCAGAAGAATTGGGTCGTTTGTCAAGATTAAGACATCTTCTTCTACTCAACAACTCGTTGGTTGGAGAACTTCCAATAAACTTGACAAAGTGCTCAGAGCTCAAAAGGATAAGGTTAGGTGGAAACAAGCTTATCGGAAAAATACCTAGCCAAATTGGATCTCTTGTAAGGCTTCAATATCTTTCCATGGAACAAAACAATTTGACCGGAAAAGTTCCACCATCTATAAGGAATCTATCATCCCTTACTATTTTTTCGGTCGGTTATAACAACTTGGTAGGAAATATTCCGCAAGAAATGTGCTTCCTAAAACAGTTGGAGATTATAGCAGTGCATGTCAACAAATTGTCTGATACATTTCCTTCTTGTCTTTATAATATGTCATCTCTTGAAATGATTTCAGCTCCGATGAATAACTTTAGTGGCTCTCTTCCACCCAATATGTTCCACACCCTCCCCAATCTATATTTCTTTGGCATTTCTGCAAATCAAATCTCAGGTCCAATCCCTATTTCCATTACAAATGCTTCTAGTTTGCAGTTATTTGATATCAGTCAAAACCATTTTATGGGACAAGTTCCAAGTTTTGGGAAGCTACAAAGTCTTTTGAGGCTAAGTATGTCTATCAACAATATCGGTGGCAATTCCATGAAGGACTTGGAGTTCTTAAAATCATTGGCAAACTGTAGCAAGTTGCAAATTCTCTCTTTGACCAGTAATAATTTTATAGGAAGATTGCAAAACTTTATAGGTAATTTATCCACCACACTAGAAGGATTATATATGGGGGGCAATCAAATATATGGAAAAATTCCCACAGAATTAGGAAATATAATTAGCTTGAGACTCTTGGCCATGGAATATAATTATTTGGAAGGTATGATTCCAACTACTTTTGGAAAGTTTCCAAGGATAGAAAGGTTAGTATTGAGTGGAAACAATTTATCTGGGGATATACCAACTTCCATTGGCAACCTCAGTCAACTGTATGATTTACAACTAGATGTAAATATCTTAGAAGGGCATATTCCTCCAAATATAGGAAGCTGTCAAAAGTTACAATATCTAGACCTTTCGCAAAATAACCTTAGAGGAACCATACCCTTAGAGATTTTCAGTATACCTTCTTTATCAAATACACTAGACTTATCACTAAACTCATTTAGTGGTATCTTACCAAAAGAAGTGGGTATGCTAAAAAATATTAATTGGCTAGATGTCTCTGAGAATCATTTGTCTGGGGACATTCCTGAAACCATTGGTGAATGCATAAGCTTAGAATACCTTCATTTACAAGGGAACTCCTTCAATGGAACAATACCAATCCATTTGGCTTCTCTAAAAGGTCTGCGATATTTAGACCTTTCAAGAAATCAATTGTATGGACCAATTCCTGATGTTATGCAGAATATCTCTAGCTTAGAACACTTGAATGTTTCTTTCAACATGTTGGAAGGTGAGGTACCGACTGATGGTGTATTTGGAAATGCAACCCAAGTAGCAATTATTGGAAATAATAAGCTTTGCGGTGGTATTTCACAGCTGCATCTACCACCATGCCTTATCAAGGGTAGGAAACACGCAAAACACCATAAATTCAGGTTGATAGCAGTTATTGTCAGTGTGGTCTCTTTTCTTATCATACTTTCATTTATTGTAACTATATATGTGATGAGGAAAAGAAATCTAAAACGACATGTTGATTCACCAACAATTGATCGACTATTTAAGGTTTCATACCAAGACTTACATCGAGGGACAAATGGTTTCTCAGCTAGAAACTTGATCGGATCAGGAGGTTTTGGTTCTGTGTATAGAGGAAATCTTGTATCAGAAGATAATGTTGTTGCCGTGAAGGTCCTTAACCTACAAAATGAAGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATCAGACACCGAAATTTAGTCAAGATTTTAACATGTTGTTCCGGTACAGATTACAATGGTCAAGAATTTAAAGCTCTAGTTTTTTATTACATGAAAAATGGAAGCTTAGAACAGTGGTTGCATCCCGACATTTTAACTGAAGAGCAACCAACATTGGACTTTGGTCATAGATTACACATCATTATCGACGTTGCATCTGCAATACATTATCTTCATCAAGAATGTAAGCAATTGATCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTCGATGAAGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACCCTTAGTGGTAATACTAGTACAATTGGAATCAAAGGGAGTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAAATGCTTACCGGTAGAAGACCCACTGATGAAGTTTTCAAAGATGGTCAAAATCTGCATAACTTTGTTGCAATTTCATTTCCTGATAATCTTGGAAATATTTGTGACCAACATCTTGTATCAAGAGATGTAGAAGTGGCAGAAGATGGAAACAATGAAAATTCTATTCCAACTATAAAGGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTAGTTGTTCAATGGAATCACCGAAGGAAAGAATGAATATTGTGGATGTCAGTAGAGAGCTTAACATAATCAGAAAGACCTTTCTCGCTGGTTTCCGCACTTGTAATTAG 3072 0.3633 MKPCIFLLPMSWYVYLHLLNLFTLTLMCFGSNRTLTMELGNQTDHLALLQFKQLISNDPNGILDSWNSSTHFCKWHGIICSPKHQRVTKLKLEGYKLHGSISPYVGNLSHMRFLDLRNNSFYGNIPEELGRLSRLRHLLLLNNSLVGELPINLTKCSELKRIRLGGNKLIGKIPSQIGSLVRLQYLSMEQNNLTGKVPPSIRNLSSLTIFSVGYNNLVGNIPQEMCFLKQLEIIAVHVNKLSDTFPSCLYNMSSLEMISAPMNNFSGSLPPNMFHTLPNLYFFGISANQISGPIPISITNASSLQLFDISQNHFMGQVPSFGKLQSLLRLSMSINNIGGNSMKDLEFLKSLANCSKLQILSLTSNNFIGRLQNFIGNLSTTLEGLYMGGNQIYGKIPTELGNIISLRLLAMEYNYLEGMIPTTFGKFPRIERLVLSGNNLSGDIPTSIGNLSQLYDLQLDVNILEGHIPPNIGSCQKLQYLDLSQNNLRGTIPLEIFSIPSLSNTLDLSLNSFSGILPKEVGMLKNINWLDVSENHLSGDIPETIGECISLEYLHLQGNSFNGTIPIHLASLKGLRYLDLSRNQLYGPIPDVMQNISSLEHLNVSFNMLEGEVPTDGVFGNATQVAIIGNNKLCGGISQLHLPPCLIKGRKHAKHHKFRLIAVIVSVVSFLIILSFIVTIYVMRKRNLKRHVDSPTIDRLFKVSYQDLHRGTNGFSARNLIGSGGFGSVYRGNLVSEDNVVAVKVLNLQNEGAHKSFIVECNALKNIRHRNLVKILTCCSGTDYNGQEFKALVFYYMKNGSLEQWLHPDILTEEQPTLDFGHRLHIIIDVASAIHYLHQECKQLIIHCDLKPSNVLLDEDMVAHVSDFGIARLVSTLSGNTSTIGIKGSVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDEVFKDGQNLHNFVAISFPDNLGNICDQHLVSRDVEVAEDGNNENSIPTIKECLVSLFRIGLSCSMESPKERMNIVDVSRELNIIRKTFLAGFRTCN* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1350 1023 SMART serkin_6 715 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1350 1023 SUPERFAMILY L domain-like 42 337 - -
Tpr2g1350 1023 PANTHER LRR RECEPTOR-LIKE KINASE 29 1018 - -
Tpr2g1350 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Tpr2g1350 1023 ProSiteProfiles Protein kinase domain profile. 715 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1350 1023 Pfam Protein tyrosine and serine/threonine kinase 718 1007 IPR001245 GO:0004672|GO:0006468
Tpr2g1350 1023 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Tpr2g1350 1023 Gene3D Transferase(Phosphotransferase) domain 1 797 1017 - -
Tpr2g1350 1023 SUPERFAMILY Protein kinase-like (PK-like) 692 1008 IPR011009 -
Tpr2g1350 1023 Gene3D Phosphorylase Kinase; domain 1 697 796 - -
Tpr2g1350 1023 Gene3D Ribonuclease Inhibitor 321 654 IPR032675 -
Tpr2g1350 1023 SUPERFAMILY L domain-like 354 635 - -
Tpr2g1350 1023 Gene3D Ribonuclease Inhibitor 41 320 IPR032675 -
Tpr2g1350 1023 PANTHER OS04G0122200 PROTEIN 29 1018 - -
Tpr2g1350 1023 PRINTS Leucine-rich repeat signature 478 491 - -
Tpr2g1350 1023 PRINTS Leucine-rich repeat signature 572 585 - -
Tpr2g1350 1023 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Tpr2g1350 1023 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Tpr2g1350 1023 SMART LRR_sd22_2 475 496 - -
Tpr2g1350 1023 SMART LRR_sd22_2 572 601 - -
Tpr2g1350 1023 SMART LRR_sd22_2 180 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1350 Tpr-Chr2 15772573 15776368 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1350 41 1021 Receptor kinase-like Gene Family AT3G47570 44.734 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1350 PK_Tyr_Ser-Thr 2.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1350 - - mtr:MTR_5g025930 1456.81