Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1349 ATGGGATTATGGCTCTATATTGTAGCAATTATTTCTCTATACATTTTTATTCATGCCCTTCTTAATGTAATATACAACAAAAAGTTACCGCCAAGCCCTCCAACCATACCTTTCATAGGTAACCTTTTTTGGCTTCTAAAGTCTTCAAAAAATTTTGCTGAACTTGAACCTGTGCTTCGTTCATTACGTTCTAAATATGGTGACATTGTTACCATTTTTATAGGTTCAAGACCTTCAATTTTTATTACATCCCATGAAGCTGCTCATAGAGCACTTGTTAAAAATGGTACAATTTTTGCTAGTCGTCCCTTAGCACTTGAAACAACCAAACTATTCTTCCCTAAACAACATTCCATTAGTACGTCCGCTTATGGTCCAATTTGGAGACTATTACGCCAAAATTTCATGCAAGCGACTCAACCTTCTCGGTTAAATTTATATTCACGTTGTCGTAAATGGGCATTGAATGTTCTCAAGAAAAATATTTTAGTTGATATTGAACTAGGAAACAAGACCATACCGATTGATGATTATTTTAATTTCACACTTTATACTTTATTTACGTACATGTGCTTGGGGGAGAAATTTGATAGAGAATGTGTTGAGAATATCCAGAGGGTACAACACTGTTTAATTCACAATTTCATTAGGTTCAATGTGTTGAATTTCGCACCGATATTGACTAGGATCATGTTTAGAGGATTATGGAGAGAGGTCTTGCAAATTCGTGAAAACCAAATGAATGTTTTTCTTCCTATAATAAAAGCGCGCCAAGAGAAAATAAAAAACAAGATTAATATCAGTGATGAAGACGAAGATAAGGAAGATTTTGAGGCATATGTTGATACCCTTTTCGATTTAAAACTCCCGGATAGTGGAAACAAACTAAACGATGAAGAGTTAGTGAGTTTGTGTTCCGAATTTTTGTTAGGTGGAACAGACACAACAGCTACCACGTTATTATGGACCATGGCTAATTTAGTAAAGAATCAAAACATTCAAGAGAAACTTTATGATGAAATTAAGGAAGTTGTGAAACACAATGAAGAAATTGAAGAGGAGCATTTGCAAAGGATGCCTTATTTGAAGGCTGTGGTGTTAGAAACATTTAGAAGACATCCACCAGGTCATTTTATATTGCCTAGGGCTGTTATACAAGAAACTATTATGGATGGTTATAAGATACCAAAAAATGCAATGATTAATTTTCCTGTGGCTGAATTAGGGTGGGATCCAAATGTTTGGGAGAATCCAATGGAGTTTAAGCCTGAAAGATTTTTGAATGGAGAGGATGTTAATTTTGATTTAAAAGGGTTTAAAGAGATTAAAATGATGCCATTTGGTGCTGGGAGGAGGGTATGTCCAGCAATTAATATTGCAATGCTTCATCTTGAGTACTTTGTGGCCAATTTGGTGAGGGATTTTAAATGGACAATTGAAGATGGAAATGAGGTTGACTTGAGTGAAAAACAAGCCTTCACTATTGTAATGAAGAATCCATTGAAGCCATGTTTGTCTCCAAGAATCGTTTGA 1533 0.3503 MGLWLYIVAIISLYIFIHALLNVIYNKKLPPSPPTIPFIGNLFWLLKSSKNFAELEPVLRSLRSKYGDIVTIFIGSRPSIFITSHEAAHRALVKNGTIFASRPLALETTKLFFPKQHSISTSAYGPIWRLLRQNFMQATQPSRLNLYSRCRKWALNVLKKNILVDIELGNKTIPIDDYFNFTLYTLFTYMCLGEKFDRECVENIQRVQHCLIHNFIRFNVLNFAPILTRIMFRGLWREVLQIRENQMNVFLPIIKARQEKIKNKINISDEDEDKEDFEAYVDTLFDLKLPDSGNKLNDEELVSLCSEFLLGGTDTTATTLLWTMANLVKNQNIQEKLYDEIKEVVKHNEEIEEEHLQRMPYLKAVVLETFRRHPPGHFILPRAVIQETIMDGYKIPKNAMINFPVAELGWDPNVWENPMEFKPERFLNGEDVNFDLKGFKEIKMMPFGAGRRVCPAINIAMLHLEYFVANLVRDFKWTIEDGNEVDLSEKQAFTIVMKNPLKPCLSPRIV* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1349 510 Pfam Cytochrome P450 30 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 SUPERFAMILY Cytochrome P450 30 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PANTHER CYTOCHROME P450 FAMILY PROTEIN 3 508 - -
Tpr2g1349 510 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Tpr2g1349 510 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 3 508 - -
Tpr2g1349 510 Gene3D Cytochrome P450 24 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 Coils Coil 334 354 - -
Tpr2g1349 510 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr2g1349 510 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1349 Tpr-Chr2 15755716 15757248 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1349 1 508 Cytochrome P450 AT1G64940 47.287 9.46e-170 487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1349 K24184 - gmx:102660230 756.133