LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g1349	ATGGGATTATGGCTCTATATTGTAGCAATTATTTCTCTATACATTTTTATTCATGCCCTTCTTAATGTAATATACAACAAAAAGTTACCGCCAAGCCCTCCAACCATACCTTTCATAGGTAACCTTTTTTGGCTTCTAAAGTCTTCAAAAAATTTTGCTGAACTTGAACCTGTGCTTCGTTCATTACGTTCTAAATATGGTGACATTGTTACCATTTTTATAGGTTCAAGACCTTCAATTTTTATTACATCCCATGAAGCTGCTCATAGAGCACTTGTTAAAAATGGTACAATTTTTGCTAGTCGTCCCTTAGCACTTGAAACAACCAAACTATTCTTCCCTAAACAACATTCCATTAGTACGTCCGCTTATGGTCCAATTTGGAGACTATTACGCCAAAATTTCATGCAAGCGACTCAACCTTCTCGGTTAAATTTATATTCACGTTGTCGTAAATGGGCATTGAATGTTCTCAAGAAAAATATTTTAGTTGATATTGAACTAGGAAACAAGACCATACCGATTGATGATTATTTTAATTTCACACTTTATACTTTATTTACGTACATGTGCTTGGGGGAGAAATTTGATAGAGAATGTGTTGAGAATATCCAGAGGGTACAACACTGTTTAATTCACAATTTCATTAGGTTCAATGTGTTGAATTTCGCACCGATATTGACTAGGATCATGTTTAGAGGATTATGGAGAGAGGTCTTGCAAATTCGTGAAAACCAAATGAATGTTTTTCTTCCTATAATAAAAGCGCGCCAAGAGAAAATAAAAAACAAGATTAATATCAGTGATGAAGACGAAGATAAGGAAGATTTTGAGGCATATGTTGATACCCTTTTCGATTTAAAACTCCCGGATAGTGGAAACAAACTAAACGATGAAGAGTTAGTGAGTTTGTGTTCCGAATTTTTGTTAGGTGGAACAGACACAACAGCTACCACGTTATTATGGACCATGGCTAATTTAGTAAAGAATCAAAACATTCAAGAGAAACTTTATGATGAAATTAAGGAAGTTGTGAAACACAATGAAGAAATTGAAGAGGAGCATTTGCAAAGGATGCCTTATTTGAAGGCTGTGGTGTTAGAAACATTTAGAAGACATCCACCAGGTCATTTTATATTGCCTAGGGCTGTTATACAAGAAACTATTATGGATGGTTATAAGATACCAAAAAATGCAATGATTAATTTTCCTGTGGCTGAATTAGGGTGGGATCCAAATGTTTGGGAGAATCCAATGGAGTTTAAGCCTGAAAGATTTTTGAATGGAGAGGATGTTAATTTTGATTTAAAAGGGTTTAAAGAGATTAAAATGATGCCATTTGGTGCTGGGAGGAGGGTATGTCCAGCAATTAATATTGCAATGCTTCATCTTGAGTACTTTGTGGCCAATTTGGTGAGGGATTTTAAATGGACAATTGAAGATGGAAATGAGGTTGACTTGAGTGAAAAACAAGCCTTCACTATTGTAATGAAGAATCCATTGAAGCCATGTTTGTCTCCAAGAATCGTTTGA	1533	0.3503	MGLWLYIVAIISLYIFIHALLNVIYNKKLPPSPPTIPFIGNLFWLLKSSKNFAELEPVLRSLRSKYGDIVTIFIGSRPSIFITSHEAAHRALVKNGTIFASRPLALETTKLFFPKQHSISTSAYGPIWRLLRQNFMQATQPSRLNLYSRCRKWALNVLKKNILVDIELGNKTIPIDDYFNFTLYTLFTYMCLGEKFDRECVENIQRVQHCLIHNFIRFNVLNFAPILTRIMFRGLWREVLQIRENQMNVFLPIIKARQEKIKNKINISDEDEDKEDFEAYVDTLFDLKLPDSGNKLNDEELVSLCSEFLLGGTDTTATTLLWTMANLVKNQNIQEKLYDEIKEVVKHNEEIEEEHLQRMPYLKAVVLETFRRHPPGHFILPRAVIQETIMDGYKIPKNAMINFPVAELGWDPNVWENPMEFKPERFLNGEDVNFDLKGFKEIKMMPFGAGRRVCPAINIAMLHLEYFVANLVRDFKWTIEDGNEVDLSEKQAFTIVMKNPLKPCLSPRIV*	511

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g1349	510	Pfam	Cytochrome P450	30	499	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr2g1349	510	SUPERFAMILY	Cytochrome P450	30	508	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr2g1349	510	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	3	508	-	-
	Tpr2g1349	510	PRINTS	P450 superfamily signature	311	328	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr2g1349	510	PRINTS	P450 superfamily signature	364	375	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr2g1349	510	PRINTS	P450 superfamily signature	445	454	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr2g1349	510	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	447	456	IPR017972	GO:0005506\|GO:0016705
	Tpr2g1349	510	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	3	508	-	-
	Tpr2g1349	510	Gene3D	Cytochrome P450	24	509	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Tpr2g1349	510	Coils	Coil	334	354	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g1349	Tpr-Chr2	15755716	15757248	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr2g1349	1	508	Cytochrome P450	AT1G64940	47.287	9.46e-170	487

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g1349	K24184		-	gmx:102660230	756.133

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