Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1348 ATGGGCATTTGTCTGATAAAAGGCCAATGGCTGTGGCTTCTGTATGTTTTGCTGATACATATTGTAATTAATAACATTGAAGCGATCAGTCCTGATGGCGAGGCACTTATCAACTTCAGGACAGCAATTACTAGCGATATCCTGTTACAATGGAGGCCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCAAAAACCAAGAGAGTGACACATCTGATTCTGTCATCCCATAATTTAATTGGGACTTTATCACCTGACCTTGGGAAGTTAGAGCATCTGAAAGTTATTGATCTTCATTACAACAACCTCTATGGGATGATTCCACCAGAATTGGGAAATTGCACTGAATTACAGGGAATCTTTTTACAGCGTAATTACATTGTTGGAATGATTCCAAGTGAAACAGGAAATCTCTCGCAGCTTCAAGATTTGGATATATCAGACAATCTTCTTACCGGGAATATTCCAGCGTCAATTGGAAAGTTGTATAATCTAAAAAACTTCAATGTATCAACCAATTATCTGGTTGGACAAATACCTTCTGATGGTGTCCTTGCCAACTTTACTGGAAGCTCGTTTGCTGGAAACCCAGGTTTGTGTGGAGTGCAAATCGATTCAAGATGTAAAAATGATGGTTTGCCTGGGAAAATATCTTCTGACCAATATCAAAATGGAAAGAAGAATAATTCTGGCCGACTTCTCATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTACAAAAAGTTTGGTAAAAATGATAGAGTAAGTCTTGCAATGGATGTTGGTCCAGGTGCCTCAATAGTTATGTTTCATGGAGACCTTCCATATTCTTCGAAAGACATTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGAGTAGGGGGATTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCGTTGAAAAGGATTGTAAAGTTGAATGAGGGCTTTGATCGTTTTTTTGAGAGGGAGCTTGCAATTCTTGGTAGCATCAAGCATCGTTATTTAGTTAATTTACGTGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTTGATGAAGTTCTTCATGAAAGATCTGAGCAACTAGACTGGGATTCACGGTTGAATATAATCATGGGAGCTGCAAAAGGGCTTGCTTACTTGCACCACGATTGTTCCCCCAGGATCGTACACCGAGACATAAAATCAAGCAATATTTTGCTCGATGGAAAATTGGATGCTCGGGTTTCTGATTTCGGACTTGCCAAACTTCTGGAGGATAACGAATCTCACATCACTACAATTGTTGCTGGAACATTCGGTTATCTAGCTCCAGAGTATATGCAAAGTGGCAGAGCAACCGAGAAGACTGATGTCTATAGTTTTGGGGTGTTGACACTTGAAGTGCTTAGTGGAAAACGGCCAACAGATGCATCATTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTTATTACTGAAAATAGGCCGAGGGATATTGTCGACCCACTATGCGACGGGGTGCAGGTGGAGAGCCTTGATGCGTTGCTCTCTATGGCTATTCAATGTGTTTCCTCAAGTCCAGAGGATCGACCGACTATGCACCGAGTGGTCCAGTTGCTTGAATCAGAGATTGTAACTCCATGCCCAAGTGACTTCTATGACTCGAGCTCTGATTAG 1770 0.4085 MGICLIKGQWLWLLYVLLIHIVINNIEAISPDGEALINFRTAITSDILLQWRPEDPDPCKWKGVKCDPKTKRVTHLILSSHNLIGTLSPDLGKLEHLKVIDLHYNNLYGMIPPELGNCTELQGIFLQRNYIVGMIPSETGNLSQLQDLDISDNLLTGNIPASIGKLYNLKNFNVSTNYLVGQIPSDGVLANFTGSSFAGNPGLCGVQIDSRCKNDGLPGKISSDQYQNGKKNNSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRVSLAMDVGPGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGVGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELAILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIVHRDIKSSNILLDGKLDARVSDFGLAKLLEDNESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRPRDIVDPLCDGVQVESLDALLSMAIQCVSSSPEDRPTMHRVVQLLESEIVTPCPSDFYDSSSD* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1348 589 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Tpr2g1348 589 Gene3D Ribonuclease Inhibitor 30 213 IPR032675 -
Tpr2g1348 589 Pfam Protein kinase domain 306 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1348 589 SUPERFAMILY Protein kinase-like (PK-like) 287 571 IPR011009 -
Tpr2g1348 589 ProSitePatterns Protein kinases ATP-binding region signature. 310 336 IPR017441 GO:0005524
Tpr2g1348 589 PANTHER RECEPTOR-LIKE PROTEIN 55 3 589 - -
Tpr2g1348 589 ProSiteProfiles Protein kinase domain profile. 304 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1348 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Tpr2g1348 589 Gene3D Phosphorylase Kinase; domain 1 280 379 - -
Tpr2g1348 589 SMART serkin_6 304 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1348 589 SUPERFAMILY L domain-like 43 194 - -
Tpr2g1348 589 Gene3D Transferase(Phosphotransferase) domain 1 380 577 - -
Tpr2g1348 589 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 589 IPR031071 GO:0004672|GO:0005524|GO:0030244
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1348 Tpr-Chr2 15741677 15751691 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1348 1 580 Receptor kinase-like Gene Family AT2G35620 73.711 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Tpr2g1348 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1348 - - gmx:100819230 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1348 2 15741677 15751691 Tpr2g1348 2 15741677 15751691 ECH