Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1339 ATGAAAGAATCATCAAAACCATGGAGACCATTTACATCAAATTGTTGCACAACAGAAAACCAAACAATCTTAAAAAATTTCAGTAAATGTAAACCTTCACGTTCAGATTATTCTAAGAACATTGCTCCTTTACCATCTTTTAGGAGACTTTCTTTTTCTGATCTTAGCCGTTCCTCTTCGACGCGAATCAATGAAGATCTTGCACTTTCTTTTGGTTCTGATTTGTGTGATTTTCAGCTGAGTGAACTTCGAGCTATTACGCAGAATTTTTCGAGCAATTTTTTGCTTGGTGAAGGTGGATTTGGAACTGTTCATAAAGGTTATTTAGATGATAATTTTAGACAAGGTTTGAAGGCTCAACCTGTTGCTGTTAAGCTTTTGGATATTGAAGGTTTACAAGGACATCGTGAATGGCTCGCAGAAGTGATTTTTCTTGGGCAGTTAAGGCATCCAAATTTGGTGAAGTTGATTGGATATTGTTGTGAGGATGAAGAAAGACTACTTGTCTATGAATTTATGCCAAGAGGAAGCTTGGAGAATCACTTATTTAGAAGACTAACATCAATACCTTGGGCAACAAGATTAAAAATTGCAATTGGTGCTGCTAAAGGCCTTTCTTTCTTGCATGGTGCTGAAAAACCAGTCATTTATAGAGACTTTAAGACTTCCAATGTCTTACTTGATTCGGTGAGTACTGACAGTGTAAAAAACGTTTAG 717 0.3626 MKESSKPWRPFTSNCCTTENQTILKNFSKCKPSRSDYSKNIAPLPSFRRLSFSDLSRSSSTRINEDLALSFGSDLCDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYLDDNFRQGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSIPWATRLKIAIGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSVSTDSVKNV* 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1339 238 Gene3D Phosphorylase Kinase; domain 1 52 172 - -
Tpr2g1339 238 Gene3D Transferase(Phosphotransferase) domain 1 173 236 - -
Tpr2g1339 238 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 30 235 - -
Tpr2g1339 238 Pfam Protein tyrosine and serine/threonine kinase 95 229 IPR001245 GO:0004672|GO:0006468
Tpr2g1339 238 ProSitePatterns Protein kinases ATP-binding region signature. 96 125 IPR017441 GO:0005524
Tpr2g1339 238 SUPERFAMILY Protein kinase-like (PK-like) 71 229 IPR011009 -
Tpr2g1339 238 ProSiteProfiles Protein kinase domain profile. 90 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1339 238 PANTHER OS01G0588500 PROTEIN-RELATED 30 235 - -
Tpr2g1339 238 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1339 Tpr-Chr2 15644363 15648247 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1339 78 228 Glycoside Hydrolase AT3G07070 53.205 1.42e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr2g1339 PK_Tyr_Ser-Thr 3.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1339 - - gmx:100814241 414.846