Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1334 ATGGCAGGACAATCAAGAAAATGGATGATACTAATAGCAACAATATGGATTCAAGCATTTACAGGAACAAATTTTGATTTTTCATCATATTCATCAACAATGAAATCTGTTCTTAAAATATCACAAGTTCAACTTAACTACTTAGCAACTGCTAGTGATATGGGTAAAGTATTTGGTTGGTCTTCTGGTCTTGCTCTTATGTATCTTCCTATTTCTCTTGTTATGTTTATTTCTGCTTCTATGGGTCTTATTGGTTATGGCCTTCAATTTCTTCTCATCAATAACTTCATCTCTTTGCCTTATTTTCTGGTTTTTCTTCTGTGTCTGTTAAGTGGCTGTAGCATATGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATAAAAAATTTCCCAGTTAACAGACCCTTAGCATTATCACTCACTGTCAGTTTCAATGGTGTAAGTGCAGCACTCTACACTCTCGCCGCAAATTCAATAAACCCTTCATCAGATAACCTCTATCTTCTCTTAAATGCCCTTGTTCCTCTTCTCACTTCCATTGCTGCATTACCTCCAATCCTTCGCCAACCGCCTTTATCAGACACTTATTCTCCACACGCTGCTCGTCACAACTCATTTATATTTCTCACATTGAACATTTTAGCGGTTTTCACTGGCCTTTATCTCCTTATATTTGCCTCATCAACTTCTGACGAAGCTACATCGAGATTTTACTTTGGTGGAGCTCTTATACTTTTAATCTCGCCGTTATGTATTCCTGGTATTATATATGCTAGAGATTGGTTTCACCGCACTGTTCATTCGAGCCTTCAAGTTGAAAACACTGGCTTCATTCTTGTTCATGTTGATGATCTTGAGCTTCATAAAGAACTTCTTACACGTGAAAACAGCGCTCGTAATGTCAGCAATGGAGACGGTCAAAGCCTACTTGGTGAAAATGGATATGGAATTCAGAGGGCAAAAAGTAGTGATGTGAATTGTAACAAGTTTTTCGGACAGGATCAATTGGAAATGCTTGGAGAAGAACATTCAGCCGCGGTTCTTGTAAAAAGGTTGGATTTTTGGCTTTACTATGTTGCATACTTCTGTGGAGGTACTATTGGTCTTGTTTACAGCAATAATCTTGGACAGATAGCTCAATCTTTAGGCCACAGTTCAAGAACGTCAACACTTGTCACGCTATATTCATCGTTCTCTTTCTTTGGCCGTTTGCTTTCAGCTACGCCGGACTACATTCGAAACAAGGTCTACTTTGCGAGAACAGGATGGCTAACCATTGCACTAATACCAACACCGATTGCATTCATATTTCTGGCTTCATCAGATAGTGCTGCGGCACTTAATATAGGCACTGCGCTAATCGGTTTGAGCTCAGGCTTCATATTCGCAGCTGCAGTGGCAGTTACGTCCGAGCTATTTGGAGCTAACAGTCTTAGTGTCAATCACAACATTCTTATTACAAATATTCCAATTGGATCCCTTCTCTATGGTTTTCTGGCTGCATTAGTTTATGATGCTAATGCTATCTCCGCACCTGCAAACGGGAACATAATAATGTCCAATTCGTTAGTTTGTATGGGAAGACAATGCTATTTCTGGACATTTGTATCGTGGGGATGTATATCTGTCATAGGATTAATTTCTAGTTTGATGTTATTCTTAAGAACCAAACATGCTTATGAATGTTTCGAGAGACACCGTATTTCAGCACAATCGACTGTGTCTTGA 1728 0.3906 MAGQSRKWMILIATIWIQAFTGTNFDFSSYSSTMKSVLKISQVQLNYLATASDMGKVFGWSSGLALMYLPISLVMFISASMGLIGYGLQFLLINNFISLPYFLVFLLCLLSGCSICWFNTVCFVLCIKNFPVNRPLALSLTVSFNGVSAALYTLAANSINPSSDNLYLLLNALVPLLTSIAALPPILRQPPLSDTYSPHAARHNSFIFLTLNILAVFTGLYLLIFASSTSDEATSRFYFGGALILLISPLCIPGIIYARDWFHRTVHSSLQVENTGFILVHVDDLELHKELLTRENSARNVSNGDGQSLLGENGYGIQRAKSSDVNCNKFFGQDQLEMLGEEHSAAVLVKRLDFWLYYVAYFCGGTIGLVYSNNLGQIAQSLGHSSRTSTLVTLYSSFSFFGRLLSATPDYIRNKVYFARTGWLTIALIPTPIAFIFLASSDSAAALNIGTALIGLSSGFIFAAAVAVTSELFGANSLSVNHNILITNIPIGSLLYGFLAALVYDANAISAPANGNIIMSNSLVCMGRQCYFWTFVSWGCISVIGLISSLMLFLRTKHAYECFERHRISAQSTVS* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1334 575 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 575 - -
Tpr2g1334 575 SUPERFAMILY MFS general substrate transporter 5 558 IPR036259 -
Tpr2g1334 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 575 - -
Tpr2g1334 575 Pfam Nodulin-like 7 253 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1334 Tpr-Chr2 15610064 15615894 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1334 1 573 Nodulin-like Gene Family AT1G31470 56.969 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1334 - - gmx:100814771 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1334 2 15610064 15615894 Tpr2g1334 2 15610064 15615894 ECH
Tpr2g1334 2 15610064 15615894 Tpr4g4438 4 52073256 52078606 PCT