Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1328 ATGGAGAGGACAAGATTATGCCAATGGTTAAACCTTCTGGTGTTTGTACTGGTATGGCTCAAGACAGAAGCTGCTTATGTACCAATCACTTATGTCCACAACGCCGTGTTAAAAGGAGCCGTTTGTCTGGATGGTAGTCCACCAGCTTACCATTTAGATAAAGGATATGGAACAGGACTAAACAGTTGGTTAGTTCAATTTGAGGGAGGAGGATGGTGCAATAATGTCACTACTTGCCTTGGTCGCAAGACGAATCGTTTAGGTTCATCTAAGAAAATGGCTAATCAAATTGCATTTTCAGGAATTTTAAATGGCAGGAGACAATTTAATCCAGATTTCTACAATTGGAACAGAATCAAGGTTCGATATTGTGATGGTTCATCTTTTACTGGCGACGTAGAAGCAGTCAATCCAGTAACAAAATTGCACTTCAGAGGAGCAAGAGTTTTCAATGCTGTCATGGAGGAGTTGTTAGCAAAAGGAATGAAAAATGCTCAAAATGCTATTATCTCAGGATGTTCAGCTGGTGGATTGACTTCAATACTTCATTGTGATCGCTTTCGAGCTCTTTTACCGAGCGGGGCTAGAGTGAAATGTCTCTCAGATGCTGGTTACTTTATCAACGCAAGGGATGTATCTGGAACACAGCACATCGAACAATTCTTCAGTCAAGTTGTTACAACACATGGCTCTGCAAAGAATTTGCCTAAGTCATGCACTTCAAGACTCAATCCAAGGCTGTGTTTTTTTCCTCAATATGTTGTATCACAAATCACCACACCAATCTTCTTTGTAAACGCGGCATATGACTCATGGCAGATTAAGAACATTTTGGCGCCGGGTGCTGCTGATCCTCAGGGACATTGGCATAGCTGCAAGCTAGATATAAACAACTGCTCTTCTAATCAACTTGATCTAATGCAAGGCTTTAGAACGCAATTTCTAAGGGCATTAACTGTTATAGGAAACTCTCCATCTAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACTGAAACGCAAGAAACATGGTTTCTAAGTGACTCTCCATTATTGGCCAAGACAACCATTGCACAAGCTGTAGCAGACTGGTTTTTTGAAAGAAGGCTTTTCCATCAAATAGATTGTCCTTACCCTTGCAATCCGAGCTGTCACAACCGCGTTTTTGAACCACAAGAAAACCCAGGAAAAAATGACACCACCAAAGGAACTTCATCAGATGCATCAGCTATAAAGCCCAGTTTTTCGAAACTATCAAACAAGGCACAATGGATTGAGCTTTTGTGCATCAGAACTGGTTGGCTTTTACAAACGTTGGTTATTCTGATCATCCTGTAA 1344 0.41 MERTRLCQWLNLLVFVLVWLKTEAAYVPITYVHNAVLKGAVCLDGSPPAYHLDKGYGTGLNSWLVQFEGGGWCNNVTTCLGRKTNRLGSSKKMANQIAFSGILNGRRQFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGARVFNAVMEELLAKGMKNAQNAIISGCSAGGLTSILHCDRFRALLPSGARVKCLSDAGYFINARDVSGTQHIEQFFSQVVTTHGSAKNLPKSCTSRLNPRLCFFPQYVVSQITTPIFFVNAAYDSWQIKNILAPGAADPQGHWHSCKLDINNCSSNQLDLMQGFRTQFLRALTVIGNSPSKGMFIDSCYAHCQTETQETWFLSDSPLLAKTTIAQAVADWFFERRLFHQIDCPYPCNPSCHNRVFEPQENPGKNDTTKGTSSDASAIKPSFSKLSNKAQWIELLCIRTGWLLQTLVILIIL* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1328 447 SUPERFAMILY alpha/beta-Hydrolases 111 272 IPR029058 -
Tpr2g1328 447 PANTHER PECTIN ACETYLESTERASE 3 408 - -
Tpr2g1328 447 PANTHER NOTUM-RELATED 3 408 IPR004963 GO:0016787
Tpr2g1328 447 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1328 Tpr-Chr2 15533379 15543163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1328 5 397 Carbohydrate Esterase AT4G19420 63.551 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1328 K19882 - gmx:100776478 756.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1328 2 15533379 15543163 Tpr2g1328 2 15533379 15543163 ECH
Tpr2g1328 2 15533379 15543163 Tpr4g4434 4 52022961 52027401 PCT
Tpr4g4435 4 52038609 52044340 Tpr2g1328 2 15533379 15543163 PCT