Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1324 ATGAAGAACACAAACGAAGATGCTTCCACACAAGATCTGGACCCTCAAAGCGATCACAGCTCCGATTACTTAGCTCAACCACAACCTCGCCGTCTCCGCGGCTTCGCTGCCACGGCGGTGGGAATCAATTCCACCGGAAAAGGAAAAAAAGAAAGAGAAAAAGAAAAGGAACAAACGAAGCTCCGAGAACGACACCGTCGAGCCATCACCAGCCGAATGTTAGCTGGACTCCGTCAGTATGGTAATTTCCCTTTACCGGCGCGTGCTGACATGAACGACGTACTCGCTGCTCTAGCGCGTGAAGCTGGTTGGATTGTTGATGCTGATGGAACTACCTATCGCCAGTGTCTTCCTCCTTCTCACATGGGATCATTTGTGGCAAGGTCAGTTGAAAGTCAACTATCTGGTGGTTCTTTGAGAACTTCTTCTGTTAAGGAAACACTAGAGAATCAGCCACCAATACTTAGAATAGATGAGTGCTTGTCACCTGCATCTATTGATTCTGTTGTAATTGCAGAAAGGGACTCAAAGAATGGAAAATACCCAAGTGTAAGCCCCGTTAATTCAGTTGACTGCTTGGAGGCTGATCAGCTTATGCAAGATATTCATTCTGGGGTGCATGACAATGACTTCAATTGCACACCTTATGTTCCTGTTTACACAAAACTTCCGGCTGGTATTATTAACAAATTTTGCCAGTTGATGGATCCTGAGGACATTAGGCAGGAGTTAATCCATATTAAGTCCTTAAATATTGATGGTGTTGTTGTGGATTGTTGGTGGGGCATTGTTGAAGGCTGGAGCCCGCAGAAATATGTGTGGTCTGGTTATAGGGAGCTTTTTAACATTATTAGAGAATTCAAGCTAAAGTTACAGGTTGTTATGGCATTTCATGAATGTGGAGGGAATGATTCTAGTGATGCATTGATTTCCCTCCCACAATGGGTTTTGAATATTGGAAAAGACAACCAGGATATATTTTTCACAGATCGTGAAGGACGGAGAAATACCGAATGCCTATCTTGGGGAATTGACAAAGAGCGGGTTCTCAAAGGAAGAACTGGAATTGAGGTATATTTTGATATGATGAGAAGCTTTCGGACAGAGTTTGATGACCTGTTTGCAGAAGGCTTGATTGATGCTGTAGAAATTGGACTTGGAGCATCCGGGGAGCTGAAATACCCTTCTTTTTCAGAAAGGATGGGGTGGAGGTATCCTGGTATCGGTGAGTTTCAGTGCTATGATAAATACCTGCAACATAGTCTGCGCAGAGCAGCCAAACTATGTGGTCACTCTTTCTGGGCTAGAGGACCTGACAATGCCGGGCACTACAACTCTATGCCGCATGAGACTGGATTCTTTTGTGAGCGAGGTGATTATGACAACTATTATGGTCGCTTCTTCTTACATTGGTACTCCCAGACTTTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAAGCCTTGCTTTTGAGGAAACAAAAATTATTGTCAAGATTCCTGCTGTATACTGGTGGTACAAAACTCCTAGTCATGCAGCAGAGTTGACGGCAGGATATCACAACCCCACAAATCAGGATGGATACTCTCCTGTGTTTGAGGTTCTGAGGAAACATGCTGTCACCATGAAATTTGTCTGCTTAGGATTTAATCTTTCCAGCCAGGATGCTAATGAATCATTGGTTGATCCAGAGGGATTGAGTTGGCAGGTATTAAACTCGGCTTGGGAACGGGGGTTGGTCACTGCTGGAGAGAATGCACTATTTTGCTATGATAGAGAAAGGTATAAGAGATTGGTTGAGATGGCAAAACCCAGAAATGATCCTGATCAACGACACTTTTCATTCTTTGTTTATCAGCAACCATCTTTGCTTCAGGGAAATGTTTGCTTGTCGGAATTGGATTTCTTCATCAAATGCATGCATGGTGAGATGACTGGACATATGTAA 1950 0.4359 MKNTNEDASTQDLDPQSDHSSDYLAQPQPRRLRGFAATAVGINSTGKGKKEREKEKEQTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWIVDADGTTYRQCLPPSHMGSFVARSVESQLSGGSLRTSSVKETLENQPPILRIDECLSPASIDSVVIAERDSKNGKYPSVSPVNSVDCLEADQLMQDIHSGVHDNDFNCTPYVPVYTKLPAGIINKFCQLMDPEDIRQELIHIKSLNIDGVVVDCWWGIVEGWSPQKYVWSGYRELFNIIREFKLKLQVVMAFHECGGNDSSDALISLPQWVLNIGKDNQDIFFTDREGRRNTECLSWGIDKERVLKGRTGIEVYFDMMRSFRTEFDDLFAEGLIDAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLQHSLRRAAKLCGHSFWARGPDNAGHYNSMPHETGFFCERGDYDNYYGRFFLHWYSQTLIDHADNVLSLASLAFEETKIIVKIPAVYWWYKTPSHAAELTAGYHNPTNQDGYSPVFEVLRKHAVTMKFVCLGFNLSSQDANESLVDPEGLSWQVLNSAWERGLVTAGENALFCYDRERYKRLVEMAKPRNDPDQRHFSFFVYQQPSLLQGNVCLSELDFFIKCMHGEMTGHM* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1324 649 MobiDBLite consensus disorder prediction 1 24 - -
Tpr2g1324 649 Pfam BES1/BZR1 plant transcription factor, N-terminal 46 193 IPR008540 -
Tpr2g1324 649 Pfam Glycosyl hydrolase family 14 235 616 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PANTHER - 51 648 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 251 265 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 272 290 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 294 315 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 387 409 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 460 479 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 494 510 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 511 522 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 529 552 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 567 589 IPR001554 GO:0000272|GO:0016161
Tpr2g1324 649 MobiDBLite consensus disorder prediction 1 64 - -
Tpr2g1324 649 Gene3D Glycosidases 207 648 - -
Tpr2g1324 649 PANTHER BETA-AMYLASE 8 51 648 - -
Tpr2g1324 649 MobiDBLite consensus disorder prediction 46 64 - -
Tpr2g1324 649 SUPERFAMILY (Trans)glycosidases 211 646 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1324 Tpr-Chr2 15496611 15515398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1324 59 645 Glycoside Hydrolase AT5G45300 70.458 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Tpr2g1324 Glyco_hydro_14 1e-87 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1324 K01177 - gmx:100777004 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1324 2 15496611 15515398 Tpr2g1324 2 15496611 15515398 ECH