Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1313 ATGTATCCAACATTTTCATTTTGTTTATCTCTTCTCTTTGCTTTCAACTTCATCCAAAACACAATTACCTCTTCCTTAGGAAACAAGACAGATAACTTGGCATTGCTCAAATTCAAAGAATCTATCTATAATGACCCAAATGGAATCTTGGCCTCTTGGAATAGTTCAACTCACTACTGTAACTGGCATGGAATTACATGCAGTCCCATGCATCAAAGAGTTACAAAGTTAAACTTAAATGGATATAATTTGCATGGATTCATATCTCCCCATGTTGGCAATCTCTCTTTCTTGAAATATCTCAACCTTGCAAACAATAGTTTCTTTGGAAAAATCCCAAATGAATTCAGTCGATTGTTCCGATTGCAGAAACTCTTCATTAACAATAACTCTATCACAGGGGAGATTCCTACAAACTTGTCAAGTTGCTCCAATCTTGAAGTCTTATTCTTAAGTAGAAATCATTTGATTGGTAAAATACCAATTGGAATCAGCTCTCTTCATAAGCTTCGTATGTTGGAGATTCCAAATAACAATCTAACAGGAAGAATTCCATCATTCATAGGAAATCTTTCATCCCTAATTAATCTCGGAATGGCTAGAAATCACTTAGAGGGAAATATTCCACAAGAAATGTGCTACCTCAAAAACTTGACAAGAATGGTATTGGAATCCAACAGACTAAATGGTACATTTCCTTCTTGTCTATATAATATGTCATCTCTTACTATAATCTCAGCAGTACTCAATGAATTCAACGGATCTCTTCTACCCGGTATGTTTAACACCCTCTCCAATCTTCAATATTTCATAATAGGAGGAAATCAATTCACAGGTACAATTCCTATTTCCATTGCAAATGCTTCTGCCCTAATAAAACTCGATTTATCTGAAAACCATTTGTTCGGACAAGTTCCAAGTCTAGGGAAGTTACATGATCTTCAATTGCTAAATCTAGAATTAAACAATTTAGGTGACAATTCAACTAAAGATTTAGAGTTTTTAAAATCATTGACAAACTGTAGTAAACTACGAGGACTTTCTATATCCTATAATAATTTCGGAGGAAAATTGCCAAATTTTGTAGGCAATTTATCCAATCAACTTAGTCATCTACATCTTGCATTTAATATGATATCAGGAAAAATTCCTGCAGAATTAGGAAATCTAATTGGCTTAACTCTCTTGAGTGTGCAAGCAAACCACTTTGAAGGAATTATTCCTACTACTTTTGGGAAGTTTGAGAATATGCAACTATTAGTATTGCAGGGAAATCAGTTGTCAGGAGAGATACCAGCCATCATAGGCAACCTCAGTCAACTATATCTTTTGAGTATAGGAGATAATATGTTAGAAGGAAATATTCCTTCAAGTATAGGAAACTGCAAAAAGTTACAATACTTAGACCTGTCACAAAACATTCTAAGAGGAATCATACCCATTGAGGTCTTTAGTCTTTCTTCCTTAACAAACTTACTGAACTTGTCAAAAAACTCATTTAGTGGTAGCTTACCCAAAGAAGTGGGTATGCTAAAAAATATCAATAAGTTAGATGTCTCAGAGAATCATCTATCTGGTAACATTCCTAGATCCATTGGTGACTGCACAGTCTTAGAATACCTCTATTTGCAAGGAAACTCCTTCAGTGGAACCATACCATCTTCTTTGGCTTCACTAAAAGGTCTACGATATTTAGACTTGTCAAAAAATCTCTTGTCTGGCCCAATACCTACTGTTCTACAAAATATATCAGTTTTAGAACACTTGAATATTTCTTTCAACATGTTGGAAGGAAAGGTGCCAATAGAAGGTGTATGTGGAAATGTAAGCAGGTTAACTCTGACTGGAAACAATAAGCTTTGTGGAGGTATTTCAGAGCTTCATCTACAACCATGCCTTGTTAAAGGTCTGAAACAAGGAAAACACCATAAAATCAAGTTGATAGTAGTAATTGTTAGTGTGATATCAATTCTTCTCATGATGATAGTTATTCTAACTATATATTACATGTGGAAAAGAAACCAGAAACAATATTCTGATTCACCAACAACTGACACGCTAGCCAAGGTTTCATACCAAGACCTACACAATGCAACTGATGGGTTTTCTGCTAGCAACTTGGTTGGATTAGGAAGTTTTGGTTCTGTGTACAAAGGTAATCTCGCATCAGAAGATAAAGTTGTTGCCATAAAGGTCCTGAACCTTCAAAAGAAAGGAGCTCACAAGAGTTTCATTGCAGAATGTAATACACTTAAAAATGTAAGACATCGAAACTTGGTTAAAATTTTGACATGTTGTTCAAGTACAGATTACAAGGGTCAAGAATTTAAGGCATTAGTGTTTGAATACATGAACAATGGAAGCTTAGAACAATGGCTACATCCAGGGTTAATGAATGCAGGGAATCAAAGAATGTTGGACCTAAATCAAAGATTGAATATCATTGTCGGCATTGCATCTGTATTACATTACCTTCATCATGAATGTGAGCAATTGGTTATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGATTGCTCATGTGAGTGATTTTGGAATAGCAAGACTTGTCTCAACCATTGACAATACCTCTCACAAGGAAAGTAGTACTATTGGAATTAAAGGGACTATTGGATATGCTCCTCCTGAGTATGGAATGGGTTCTGAAATATCCATATATGGTGACATGTATAGCTTTGGGGTGCTTATGTTGGAAATGCTTACCGGAAGAAGACCGACAGATGAAATGTTTGAAGATGGTCAAAATCTACACATGTTTGTTGAAAATTCATTTCCTAATAATCTTATACAAATTTTGGACCTACATCTTCTACCAAGAAATGAAGCAGCAATAGAAGATGAAAACAATGGGAGTTTCACTCCGATTGTAGAGAAGTGTTTAGTTTCACTTTTTCGGATTGGACTTGCTTGTTCAGTGGAATCACCAAAAGAAAGAATGAATATAGTGGATGTTACCAGAGAGCTAAGCATAACCAAAAAGGCCTTTCTCACGGGTGTTCGAACTCGTGATTAG 3048 0.354 MYPTFSFCLSLLFAFNFIQNTITSSLGNKTDNLALLKFKESIYNDPNGILASWNSSTHYCNWHGITCSPMHQRVTKLNLNGYNLHGFISPHVGNLSFLKYLNLANNSFFGKIPNEFSRLFRLQKLFINNNSITGEIPTNLSSCSNLEVLFLSRNHLIGKIPIGISSLHKLRMLEIPNNNLTGRIPSFIGNLSSLINLGMARNHLEGNIPQEMCYLKNLTRMVLESNRLNGTFPSCLYNMSSLTIISAVLNEFNGSLLPGMFNTLSNLQYFIIGGNQFTGTIPISIANASALIKLDLSENHLFGQVPSLGKLHDLQLLNLELNNLGDNSTKDLEFLKSLTNCSKLRGLSISYNNFGGKLPNFVGNLSNQLSHLHLAFNMISGKIPAELGNLIGLTLLSVQANHFEGIIPTTFGKFENMQLLVLQGNQLSGEIPAIIGNLSQLYLLSIGDNMLEGNIPSSIGNCKKLQYLDLSQNILRGIIPIEVFSLSSLTNLLNLSKNSFSGSLPKEVGMLKNINKLDVSENHLSGNIPRSIGDCTVLEYLYLQGNSFSGTIPSSLASLKGLRYLDLSKNLLSGPIPTVLQNISVLEHLNISFNMLEGKVPIEGVCGNVSRLTLTGNNKLCGGISELHLQPCLVKGLKQGKHHKIKLIVVIVSVISILLMMIVILTIYYMWKRNQKQYSDSPTTDTLAKVSYQDLHNATDGFSASNLVGLGSFGSVYKGNLASEDKVVAIKVLNLQKKGAHKSFIAECNTLKNVRHRNLVKILTCCSSTDYKGQEFKALVFEYMNNGSLEQWLHPGLMNAGNQRMLDLNQRLNIIVGIASVLHYLHHECEQLVIHCDLKPSNVLLDDDMIAHVSDFGIARLVSTIDNTSHKESSTIGIKGTIGYAPPEYGMGSEISIYGDMYSFGVLMLEMLTGRRPTDEMFEDGQNLHMFVENSFPNNLIQILDLHLLPRNEAAIEDENNGSFTPIVEKCLVSLFRIGLACSVESPKERMNIVDVTRELSITKKAFLTGVRTRD* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1313 1015 ProSiteProfiles Protein kinase domain profile. 702 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1313 1015 SUPERFAMILY L domain-like 368 622 - -
Tpr2g1313 1015 SUPERFAMILY L domain-like 30 324 - -
Tpr2g1313 1015 SUPERFAMILY Protein kinase-like (PK-like) 676 1000 IPR011009 -
Tpr2g1313 1015 SMART serkin_6 702 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1313 1015 Gene3D Transferase(Phosphotransferase) domain 1 784 1009 - -
Tpr2g1313 1015 Pfam Leucine rich repeat 538 596 IPR001611 GO:0005515
Tpr2g1313 1015 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Tpr2g1313 1015 ProSiteProfiles Leucine-rich repeat profile. 464 485 IPR001611 GO:0005515
Tpr2g1313 1015 Gene3D Ribonuclease Inhibitor 182 335 IPR032675 -
Tpr2g1313 1015 Gene3D Ribonuclease Inhibitor 27 181 IPR032675 -
Tpr2g1313 1015 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Tpr2g1313 1015 Pfam Leucine Rich Repeat 98 119 IPR001611 GO:0005515
Tpr2g1313 1015 Gene3D Ribonuclease Inhibitor 336 632 IPR032675 -
Tpr2g1313 1015 PANTHER OS04G0122200 PROTEIN 18 1009 - -
Tpr2g1313 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Tpr2g1313 1015 Gene3D Phosphorylase Kinase; domain 1 683 783 - -
Tpr2g1313 1015 Pfam Protein kinase domain 705 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1313 1015 SMART LRR_sd22_2 167 193 - -
Tpr2g1313 1015 SMART LRR_sd22_2 462 483 - -
Tpr2g1313 1015 SMART LRR_sd22_2 559 585 - -
Tpr2g1313 1015 SMART LRR_sd22_2 119 148 - -
Tpr2g1313 1015 PANTHER LRR RECEPTOR-LIKE KINASE 18 1009 - -
Tpr2g1313 1015 ProSitePatterns Protein kinases ATP-binding region signature. 708 731 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1313 Tpr-Chr2 15377395 15382278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1313 23 1013 Receptor kinase-like Gene Family AT3G47570 45.309 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1313 Pkinase 3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1313 - - gmx:100785561 1297.72