Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1312 ATGTTTCCAACATTTTCATTTTGTTTATCTCTTCTCTTTGCTTTCAACTTCATCCAAAACACAATTACCTCTCCCTTAGGAAATGAAACAGATAACTTGGCATTGCTCAAATTCAAAGAATCAATATCAAATGACCCATATGGAATCTTGGCCTCTTGGAACATTTCAACTCACTACTGTAATTGGCATGGAATTACATGTAGTCCCATAAATCAAAGAGTTACACAGTTAAGCTTAGTTGGATATAACTTTCATGGATTCATATCTCCCCATATTGGCAATCTCTCTTTTTTGATAAATCTCAATCTTGCAAAAAATAGTTTCTTTGGAAAAATCCCTCATGAACTCGATCGATTGTTCCGATTGCAGCAACTCATTCTCTCCGAAAACTCCATCACAGGGGAGATTCCTACAAACTTGTCAAGTTGCTCTAATCTTGAAGTCTTATACTTATATGGGAATCATTTGATTGGTCAAATACCAATTGCAATCAGCTCTCTTCATAAGCTTCAGTGGTTATGGATAGCAGATAACAATTTAACAGGAACAATTCCATCATTCATAGGAAATCTTTCATCCCTAACTAATCTTGGAATGGGTGGGAATCATTTAGCGGGAAATATTCCACAAGAAATGTGCAGCCTCAAAATATTGACAAATATGGAAGTAGGTTTTAACAGACTACACGGTACATTTCCTTCTTGTCTTAATAATCTGTCATCTCTTACTATAATCTCAGCACCAGGCAATGAATTCAACGGATCTCTTCCACCCAATATGTTTAATACCCTCTCCAATCTTCAATATTTCATAATGGGAGGAAATCAATTCTCAGGTACAATCCCCGTTTCCATTGTAAATGCTTCTGCTCTACAAAAACTCGACTTCGATCAAAATAATTTGGTAGGACAAGTTCCAAGTCTAGGAAAGTCAAATGATCTTCGATGGCTAAATTTAGAATATAACAATTTAGGTGACAATTCAACTAGGGATTTGGAGTTTTTAGAAACCTTGACAAACTGCAGTAAACTAAGAGCGTTTTCTATATCCAGTAATAATTTTGGAGGCAACTTGCCAAATTTTGTAGGCAATTTATCCACTCACCTTAGTCAACTATATCTAGGGGGTAATAAGATATCAGGAGAAATTCCTGCAGAATTAGGAAATCTAATTGGCTTAATTCTCTTGACCCTGGACTATTGTCACTTTGAAGGAGTTATTCCTACTACTTTTGGGAAGTTTGAGAAAATGCAAAAGTTATCAATGAATGGAAATAAGTTGTCAGGAGAGATACCACCCATCATAGGCAACCTCAATCAATTGTATTTTCTTTCTATAAACGACAATATGTTAGAAGGAAATATTCCTTCAAGTATAGGAAACTGCAAAAAGTTACAATACCTAGACCTTTCACAAAACAATCTTAGAGGAATCATACCCATAGAGCTCTTTAGTCTTTCTTCCTTAACAAACTTATTGAACTTGTCAAAAAACTCATTGAGTGGTAGCTTACCCAAAGAAGTGGGTAAGCTACTAAGTATAAACATGCTAGATGTCTCAGAAAATCATCTGTCTGGAGACATTCCTAGAACCATCGGTGAATGCATAGACTTAGAATACCTCTATTTGCAAGGTAACTCCTTCAACGGAACCATACCATCTTCTTTGTCTTCACTAAAAGGTCTTCAATATATAGACTTGTCAAGAAATTGGTTGTCTGGACCAATTCCTAATGTTCTGCAAAATATATCAGTGCTAGAACACTTGAATATTTCTTTCAACGTGTTGGAAGGCGAGGTACCGATAGATGGTGTCTTTGGAAATATAAGCAGGTTAGCTGTGACCGGAAACAATAAGCTTTGTGGAGGCATTTCAGAGCTTCATCTACAGCCATGCCCTGTTAAACGTCTGAAACATTCAAAACAACGTAAAATCAAATTGATAGTAGTGATTGTTAGTGTGGTATCTATTCTTCTCACGATGACAATTTTCCTAACTATCTATTGCATGAGGAAAAGAAACCAGAAACAGTATTCTAATTCACCAACAACTGACCCGCTAGCCAAGGTTTCATACCAAGACCTTCACAATGGAACTGATGGGTTTTCTGCTACAAACTTGGTTGGAGTAGGAGGTTTTGGTTCTGTGTACAAAGGAAATCTTGCATCAGAAGATAAAGTTGTTGCCATAAAGGTCCTGAACCTTCAAAAGAAAGGAGCTCATAAGAGTTTCATTGCAGAATGTAATGTACTTAAAAATATTAGACATCGAAATTTGGTGAAAATTTTGACATGTTGTTCAAGTACAGATCACAAAGGTCAAGAATTTAAGGCATTAGTGTTTGAATACATGAGAAATGGAAGCTTAGAACAATGGCTACATCCGGGGATAATGAATGTCGAGAATCAAAGAATGTTGGACCTAGATCAAAGATTGAATATAACCATCGACATTGCTTCTGTATTACATTACCTTCATCATGAATGTGAGCAAACGATCATTCATTGTGATATAAAGCCAAGCAATGTCCTTCTTGACGATGACATGGTTGTTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCGGCCATTGACAATACCTCTCACCAGGAAACTAGTACAATTGAAATTAAAGGGACTATTGGTTATTCTCCTCCAGAGTATGGAATGGGTTCTGAAATATCCACATATGGTGACATGTATAGCTTCGGGGTACTTATGTTGGAAATGCTTACCGGAAGAAAACCAACAGATGAAATGTTTGAAGATGGTCAAAATCTACACATGTTTGTTGAAAATTCATTTCCTGATAATCTAATACAGATTTTGGACCCACATCTTCTACCAAGAAATGAAGAAGCGATAATAGAAGATGGAAAGATTGTGAGTTTCACTCCAATTGTAGAAAAGTTTTTAGCTTCACTTTTTGGGATTGGTCTTGCTTGTTCAATGGAATCACCAAAAGAAAGAATGAAAATAGTGGATGTTACCAGAGAGCTAAGCGTAATCAAAAAGGCCTTTCTCGCCGGTGTTCGAACACGTGATTAG 3051 0.3641 MFPTFSFCLSLLFAFNFIQNTITSPLGNETDNLALLKFKESISNDPYGILASWNISTHYCNWHGITCSPINQRVTQLSLVGYNFHGFISPHIGNLSFLINLNLAKNSFFGKIPHELDRLFRLQQLILSENSITGEIPTNLSSCSNLEVLYLYGNHLIGQIPIAISSLHKLQWLWIADNNLTGTIPSFIGNLSSLTNLGMGGNHLAGNIPQEMCSLKILTNMEVGFNRLHGTFPSCLNNLSSLTIISAPGNEFNGSLPPNMFNTLSNLQYFIMGGNQFSGTIPVSIVNASALQKLDFDQNNLVGQVPSLGKSNDLRWLNLEYNNLGDNSTRDLEFLETLTNCSKLRAFSISSNNFGGNLPNFVGNLSTHLSQLYLGGNKISGEIPAELGNLIGLILLTLDYCHFEGVIPTTFGKFEKMQKLSMNGNKLSGEIPPIIGNLNQLYFLSINDNMLEGNIPSSIGNCKKLQYLDLSQNNLRGIIPIELFSLSSLTNLLNLSKNSLSGSLPKEVGKLLSINMLDVSENHLSGDIPRTIGECIDLEYLYLQGNSFNGTIPSSLSSLKGLQYIDLSRNWLSGPIPNVLQNISVLEHLNISFNVLEGEVPIDGVFGNISRLAVTGNNKLCGGISELHLQPCPVKRLKHSKQRKIKLIVVIVSVVSILLTMTIFLTIYCMRKRNQKQYSNSPTTDPLAKVSYQDLHNGTDGFSATNLVGVGGFGSVYKGNLASEDKVVAIKVLNLQKKGAHKSFIAECNVLKNIRHRNLVKILTCCSSTDHKGQEFKALVFEYMRNGSLEQWLHPGIMNVENQRMLDLDQRLNITIDIASVLHYLHHECEQTIIHCDIKPSNVLLDDDMVVHVSDFGIARLVSAIDNTSHQETSTIEIKGTIGYSPPEYGMGSEISTYGDMYSFGVLMLEMLTGRKPTDEMFEDGQNLHMFVENSFPDNLIQILDPHLLPRNEEAIIEDGKIVSFTPIVEKFLASLFGIGLACSMESPKERMKIVDVTRELSVIKKAFLAGVRTRD* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1312 1016 SMART LRR_sd22_2 559 585 - -
Tpr2g1312 1016 SMART LRR_sd22_2 366 392 - -
Tpr2g1312 1016 SMART LRR_sd22_2 414 440 - -
Tpr2g1312 1016 SMART LRR_sd22_2 215 241 - -
Tpr2g1312 1016 SMART LRR_sd22_2 462 483 - -
Tpr2g1312 1016 SMART LRR_sd22_2 167 193 - -
Tpr2g1312 1016 PANTHER LRR RECEPTOR-LIKE KINASE 18 1010 - -
Tpr2g1312 1016 Gene3D Transferase(Phosphotransferase) domain 1 784 1010 - -
Tpr2g1312 1016 Gene3D Ribonuclease Inhibitor 178 239 IPR032675 -
Tpr2g1312 1016 SUPERFAMILY L domain-like 29 324 - -
Tpr2g1312 1016 Gene3D Ribonuclease Inhibitor 27 177 IPR032675 -
Tpr2g1312 1016 SUPERFAMILY Protein kinase-like (PK-like) 676 1001 IPR011009 -
Tpr2g1312 1016 Gene3D Ribonuclease Inhibitor 240 633 IPR032675 -
Tpr2g1312 1016 SUPERFAMILY L domain-like 367 622 - -
Tpr2g1312 1016 SMART serkin_6 702 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1312 1016 Gene3D Phosphorylase Kinase; domain 1 664 783 - -
Tpr2g1312 1016 ProSiteProfiles Leucine-rich repeat profile. 464 485 IPR001611 GO:0005515
Tpr2g1312 1016 ProSiteProfiles Protein kinase domain profile. 702 1009 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1312 1016 PANTHER OS04G0122200 PROTEIN 18 1010 - -
Tpr2g1312 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 833 845 IPR008271 GO:0004672|GO:0006468
Tpr2g1312 1016 Pfam Protein kinase domain 705 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1312 1016 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Tpr2g1312 1016 Pfam Leucine rich repeat 121 180 IPR001611 GO:0005515
Tpr2g1312 1016 Pfam Leucine rich repeat 538 596 IPR001611 GO:0005515
Tpr2g1312 1016 ProSitePatterns Protein kinases ATP-binding region signature. 708 731 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1312 Tpr-Chr2 15350178 15353791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1312 28 1014 Receptor kinase-like Gene Family AT3G47570 45.500 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1312 Pkinase 5.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1312 - - gmx:100778093 1289.63