Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1311 ATGTTTCCAACATTTTCACTTTGTTTATCTCTTCTCTTTGCTTTCAGTTTCAACTTCATCCAAAACACAACTACCTCTCCCTTAGGAAATGAGACAGATAACTTGGCATTGCTGAAATTCAAAGAATCAATATCAAATGACCCATATGGAATCTTGGCCTCTTGGAATATTTCAACTCACTACTGTAATTGGCATGGAATTACATGTAGTCCCATAAATCAAAGAGTTACACAGTTAAACTTAGAAGGATATAAGTTACATGGATTCATACCTCCTCATGTTGGCAATCTCTCTTTTTTGGGAAATCTCAACCTTGCAAACAATAGTTTCTTTGGAAAAATCCCAAACGAACTTAGTCGGTTGTTCCGATTGCAGGCACTCTCTCTCAACAATAACTACATGACAGGAGAGATTCCTACAAACTTGACAAGTTGGTCCAATCTTAAAGGCTTATACTTGTATGGAAATCATTTGATTGGTAAATTACCAATTGGAATCAGCTCTCTTCATAAGCTTAAGACGTTGTGGATTTCAGAAAACAATTTAACAGGAAGAATTCCATCATTCATCGGAAATCTTTCATCTCTAACAACTCTTATAATGGGTATAAATGACTTAGAGGGAAATATTCCACAAGAAATGTGCAGCCTCAAAAACTTGATACTTATGGAAATACTTGAGAACAGACTATATGGAACATTTCCACCGTGTCTTTCTAATATATCATCTCTTATTTATATAGGAGCTGGATTCAATGAATTTAATGGATCTCTTCCACCCAATATGTTCAACACGTTCTCAAATCTACAATATTTTTTAATAGGAAGAAATCAATTCTCAGGTACAATCCCTATTTCAATTGCAAATGCTTCTGCCCTACGAAAACTAGAATTAGCACAAAACCATTTGGTCGGACAAGTTCCAAGTCTAGGAAAGTTACCTGATCTTCAAGTGCTAAATCTAGAATTAAACAATTTAGGTGACAATTCAACTAAGGATTTAGAGTTTTTAAAATCCTTGACAAACTGTAGTAAACTACAAGCGATTTCTATACCCTATAATAATTTTGGAGGTAATTTACCAACTTTTGTAGGAAATTTATCCACTCAACTGAGACAACTATATGTTGGGGGTAATCAGATATCAGGAAAAATTCCTCCAGAGTTAGGAAATCTAATTGGCTTAATTCTCTTGAGCCTGGACAATTGTCACTTTGAAGGAGTTATTCCTACTACTTTTGGGAAGTTTGAGAGAATGCAAAAATTATCATTGGATGGAAATAAGTTTTCAGGAGAGATACCATCCATCATAGGCAACCTCAGTCAATTGTATCATTTGACTATAGGAGATAATATGTTAGAAGGAAATATTCCTTCAAGCATAGGAAATTGCCAAAAGCTACAATACCTAGACCTTTCACAAAACAATCTTCGAGGAACCATACCCATTGAAGTCTTTAGTCTTTCCTCTTTAACAAACTTACTGAACTTGTCAAAAAACTCATTGAGTGGTGGCTTACCAAGAGAAGTAGGTAAGCTAAAAAGTGTCAACAAGCTAGATGTCTCAGAGAATCATCTATCTGGTAACATTCCTGGAACCATTGGTGAATGCACAGTCTTAGAATACCTCTATTTGCAAGGAAACTCCTTCAATGGAACCATACCATCTTCTCTGGCTTCACTAAAAGGTCTTCGATATTTAGACTTGTCAAGAAATCTCTTGTCTGGCCCAATTCCTAATGTTCTACAGAATATATCAGTGTTAGAACACTTGAATATTTCTTTCAACATGTTGGAAGGTGAGGTACCAATAGAAGGTGTATTTGGAAATGTAAGCAGGTTAACTGTGACTGGAAACAATAAGCTTTGTGGAGGTATTTCAGTGCTTCGTCTACAGCCATGCCCTGTTAAAGGTCTGAAACACTATAAAATCAAGTTGATAGTAGTGATTGTTAGTGTGATATCTATTCTTCTCATGATGATAATTATCCTAACTATCAATTCCATGAGGAAAAGAAACCAGAAACAATATTCCGATTCACCAACAACTGACCCGCTAGCCAAGGTTTCATACCAAGACCTTCACAATGGTACAAATGGGTTTTCTGCTAGCAACTTGGTTGGATTAGGAAGTTTTGGTTCTGTGTACAAAGGAAATCTTGCATCAGAAGAGAAAGTTGTTGCCATAAAGGTCCTGAACCTTCAAAAGAAAGGAGCTCATAAGAGTTTCATTGCAGAATGCCAGGCACTTAAAAATATGAGACATCGAAATTTGGTTAAAATTTTGACATGTTGTTCAAGTACGGATTACAAAGGTCAAGAATTTAAGGCATTAGTGTTTGAATACATGAGCAATGGATGCTTAGAACAATGGCTACATCCAGGAATAGTGAATGCAGGGAATCAAAGAATGTTGGACCTAGATCAAAGATTTAATATCATTGTCGACATTGCTTCTGTTTTACATTACCTTCATCATGAGTGTGAGAAATTGGTTATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGACAATGACATGATTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAGTTATTGACAACACCTCTCACCAGGAAACTAGTACAATTGGAATTAAAGGGACTATTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAATAACCACATATGGTGACATGTATAGCTTTGGGGTGCTTATGTTGGAAATGCTTACCGGAAGAAGACCGACAGATGAAATGTTTGAAGATGGTCAAAATCTACACATGTTTGTTGAAAAGTCATTTCCTAATAATCTTATACACATTTTGGACCCACATCTTCTACCAAGAAATGATGAAGCAACAATGGAAGATGGAAACATTGGGAATTTCACTCCAATTGTAGAAAAGTATTTAGTTTCACTTTTTCAGATTGGTCTTGCTTGTTCAGTGGAATCACCGAAAGAAAGAATGAATATAGTGGATGTCACCAGAGAATTAAGCATGATCAAAAAGGCCTTTATTTCTGGTGTTCGCATTGTGAGGTGA 3048 0.3612 MFPTFSLCLSLLFAFSFNFIQNTTTSPLGNETDNLALLKFKESISNDPYGILASWNISTHYCNWHGITCSPINQRVTQLNLEGYKLHGFIPPHVGNLSFLGNLNLANNSFFGKIPNELSRLFRLQALSLNNNYMTGEIPTNLTSWSNLKGLYLYGNHLIGKLPIGISSLHKLKTLWISENNLTGRIPSFIGNLSSLTTLIMGINDLEGNIPQEMCSLKNLILMEILENRLYGTFPPCLSNISSLIYIGAGFNEFNGSLPPNMFNTFSNLQYFLIGRNQFSGTIPISIANASALRKLELAQNHLVGQVPSLGKLPDLQVLNLELNNLGDNSTKDLEFLKSLTNCSKLQAISIPYNNFGGNLPTFVGNLSTQLRQLYVGGNQISGKIPPELGNLIGLILLSLDNCHFEGVIPTTFGKFERMQKLSLDGNKFSGEIPSIIGNLSQLYHLTIGDNMLEGNIPSSIGNCQKLQYLDLSQNNLRGTIPIEVFSLSSLTNLLNLSKNSLSGGLPREVGKLKSVNKLDVSENHLSGNIPGTIGECTVLEYLYLQGNSFNGTIPSSLASLKGLRYLDLSRNLLSGPIPNVLQNISVLEHLNISFNMLEGEVPIEGVFGNVSRLTVTGNNKLCGGISVLRLQPCPVKGLKHYKIKLIVVIVSVISILLMMIIILTINSMRKRNQKQYSDSPTTDPLAKVSYQDLHNGTNGFSASNLVGLGSFGSVYKGNLASEEKVVAIKVLNLQKKGAHKSFIAECQALKNMRHRNLVKILTCCSSTDYKGQEFKALVFEYMSNGCLEQWLHPGIVNAGNQRMLDLDQRFNIIVDIASVLHYLHHECEKLVIHCDLKPSNVLLDNDMIAHVSDFGIARLVSVIDNTSHQETSTIGIKGTIGYAPPEYGMGSEITTYGDMYSFGVLMLEMLTGRRPTDEMFEDGQNLHMFVEKSFPNNLIHILDPHLLPRNDEATMEDGNIGNFTPIVEKYLVSLFQIGLACSVESPKERMNIVDVTRELSMIKKAFISGVRIVR* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1311 1015 Gene3D Ribonuclease Inhibitor 188 338 IPR032675 -
Tpr2g1311 1015 SMART serkin_6 701 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1311 1015 Pfam Leucine rich repeat 540 598 IPR001611 GO:0005515
Tpr2g1311 1015 Pfam Leucine rich repeat 418 477 IPR001611 GO:0005515
Tpr2g1311 1015 ProSiteProfiles Protein kinase domain profile. 701 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1311 1015 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Tpr2g1311 1015 PRINTS Leucine-rich repeat signature 467 480 - -
Tpr2g1311 1015 PRINTS Leucine-rich repeat signature 561 574 - -
Tpr2g1311 1015 SUPERFAMILY Protein kinase-like (PK-like) 675 1000 IPR011009 -
Tpr2g1311 1015 Gene3D Phosphorylase Kinase; domain 1 663 782 - -
Tpr2g1311 1015 PANTHER OS04G0122200 PROTEIN 19 1010 - -
Tpr2g1311 1015 SUPERFAMILY L domain-like 369 624 - -
Tpr2g1311 1015 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Tpr2g1311 1015 PANTHER LRR RECEPTOR-LIKE KINASE 19 1010 - -
Tpr2g1311 1015 Pfam Protein kinase domain 704 928 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1311 1015 SUPERFAMILY L domain-like 31 326 - -
Tpr2g1311 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Tpr2g1311 1015 Gene3D Ribonuclease Inhibitor 339 634 IPR032675 -
Tpr2g1311 1015 Gene3D Transferase(Phosphotransferase) domain 1 783 1009 - -
Tpr2g1311 1015 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1311 Tpr-Chr2 15332279 15336700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1311 30 1012 Receptor kinase-like Gene Family AT3G47570 45.135 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1311 Pkinase 5.2e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1311 - - gmx:100785561 1305.81