Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1306 ATGAAGTCTTTTTCTTTGCTGTCACCTACACTTTTATACCTTCATCTTCTTTTGCTGTTTACCTTGAATTTAATGTGGTTTGACACTAATAACAATACTGTGGCAGTGGCTGCAATATTAGGAAACCAAACAGATCATTTTGCATTGCTCAAATTCAAAGAATCAATATCCACTGATCCATATAAAACTCTTGAATCTTGGAATTCTTCCATCCACTTCTGTAAGTGGCGTGGAATCACATGCAACCCCATGCATCAAAGAGTTATAGGGTTGAACCTAAATAAATATCAGTTACATGGATCGTTATCTCCCCATATTGGTAATCTTACTTTTCTGAGAAATCTCGACCTTGGAACCAACAGCTTCTATGGAGAAATCCCAAAGGAGTTAGGTAAGTTGCTACAATTGCAATATCTTTTTCTCAGCAATAACTCTTTTGTTGGTAAAATTCCTACAAACTTGACATATTGCTCCAATCTCAAATACTTATTCATGGATGGGAACAAACTGGTTGGCAAAATACCAATTGAAATTGGCTCTTTGAAAAAGCTTCAAATGATGTCTATTTATAAAAACAAATTAACTGGTGGAATCCCTTCATCCATAGGGAATCTTTCATTTGTAATGATGTTAGATTTTGTTCGTAACAACTTAGAAGGAGATATTCCACAAGCTATTTGTCGCCTCAAAAACTTACATTATTTAGGTTTGGGTGAGAACAATTTGTCTGGAACCCCTCCATCTTGTCTTTACAACATCACATCACTTACTATATTTTACATGCCAATGAATAACTTTCATGGCCCTCTTCCACCCAACATGTTTCACACTCTCCCAAATATCAAACAGTTTGGTATTGCAGGAAATCATTTTTCAGGTCCAATCCCCACTTCTATAAATGCATCTTTTTCCATTACTCATCTTGAAATGGCTGACAATAATTTTGTTGGACAAGTTCCAAGTCTAGGAAAGCTAAAAGATTTATACCTTTTGAATTTGGAACTCAACAATTTAGGTAACAATTCCGCTGAGGATTTAGAGTTTTTAAAACCTTTGACAAACTGTAGTAAATTGTATATAGCTTCTTTTGATCAAAATAACTTTGGAGGCGTTCTGCCAAATTCTATAGGCAATTTAACCAATGAGCTTAAAATGCTATATCTTGGGGTTAATATGATATCAGGAAAAATTCCTGCTGAATTAGGTCGTCTAACTGGCTTATTGTCATTGTCCTTGATATCTAACCACTTTGAAGGAGTTATTCCAACTACTTTTGGAAAGTTTAAAAAATTGCAAGCGTTAAGTTTAAGAAATAACAAGTTGTCAGGAGATATACCACACTTTGTAGGTAATCTCAGTCAATTGTATCTTTTGGATTTAGGTGATAATAAGTTTGAGGGAAATATTCCTCCAAGCATAGGAAAGTGTCAACTGTTACAAATCCTAGATCTTTCACATAATAAGCTTAGAGGAACCATACCTTTAGAGGTTTTTAATCTTTTTTCTTTAACAAACCTCTTGGACTTGTCACATAACTCTTTGAGTGGTAGCTTACCAAAAGAAGTGGGTATGCTAAAAAATATAGATTGGCTAGATGTTTCTGAAAATCATTTGTCTGGGAATATTCCTGAAACTATTGGTGAATGCATAAGCTTAGAGTACCTCAATTTACAAGGGAACTCCTTCAACGGAACAATACCATTCTCTTTGGCTTCTCACAAAGGTATGCGACATTTAGACCTTTCAAGAAATCAATTGTCTGGATCAATTCCAGATGTTATGCAAAATATCTCTAGCTTAGAGTATTTGAATGTATCTTTTAACATGTTGGATGGTGAGGTACCAACCAATGGTGTCTTTGGAAATGCAACCCAAGTAGCAATTATTGGAAACAATAAGCTTTGTGGAGGTATCTCACAGCTACATATACCACCATGCCCTATCAAGGGCAGAAAACACACAAAACACCATAAACTTAGGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTCTCATACTTTCATTTATTATAACTATGTACTGGATGAGGAAAAGAAATCAAAAACGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGATTTCATACCAAGAATTGCATCAAGGAACCAATGGGTTCTCTCCTACAAACTTGATCGGATCAGGAAGTTTTGGCTTTGTGTACAAAGCAAATCTTGTGTCGGAAGATCATGTTGTTGCCGTAAAGGTCCTGAACCTCCAAAAAAAGGGATCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGATCATGACATGTTGTTCGGGTACAGATTACAAAGGTCAAGAATTCAAAGCTCTAGTTTTTGATTATATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCCGAGATTTTAAATGAAGAGCATCCAACAACATTGGGTCTTGGTCAAAGATTAAACGTAATTATCGATGTTGCTGATGCATTACATTATCTCCACCAAGAATGTGAGCATTTGGTCCTTCATTGTGATCTAAAGCCAAACAATGTTCTTCTTGATGATGATATGGTTGCTCATGTGAGTGATTTTGGAATAGCAAGACTTGTCTTATCCATTGGTGGCAGCTCTCGGAAGGATACAAGTTCAATTGGAATTAAAGGGACGGTTGGATATGCTCCTCCAGAGTACGGAATGGGTTCCGAAGTTTCCACATGTGGTGACATGTATAGCTTTGGAATCCTCATGTTGGAAATGCTTACCGGTAGAAGACCTACTGATGAAGTTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTGCAATTTCATTTCCTGATAACCTTATGAAGATTTTAGATCCACATATTGTATCAAGAGATGTAGAAGTAGCAATACAAGATGGAAATCGTGAAAATCTTATTCCAACTATTGAAGAGTGCTTAGTTTCACTTTTTAGGATTGGAATTCTTTGTTCAATGGAATCACCGAAAGAAAGAATGAATATTGCAGATGTCACAGGAGAGCTTAACAAAATCAAAAAGGCCTTTCTCACCGGTGTTCACGCTCATAATTAG 3093 0.3569 MKSFSLLSPTLLYLHLLLLFTLNLMWFDTNNNTVAVAAILGNQTDHFALLKFKESISTDPYKTLESWNSSIHFCKWRGITCNPMHQRVIGLNLNKYQLHGSLSPHIGNLTFLRNLDLGTNSFYGEIPKELGKLLQLQYLFLSNNSFVGKIPTNLTYCSNLKYLFMDGNKLVGKIPIEIGSLKKLQMMSIYKNKLTGGIPSSIGNLSFVMMLDFVRNNLEGDIPQAICRLKNLHYLGLGENNLSGTPPSCLYNITSLTIFYMPMNNFHGPLPPNMFHTLPNIKQFGIAGNHFSGPIPTSINASFSITHLEMADNNFVGQVPSLGKLKDLYLLNLELNNLGNNSAEDLEFLKPLTNCSKLYIASFDQNNFGGVLPNSIGNLTNELKMLYLGVNMISGKIPAELGRLTGLLSLSLISNHFEGVIPTTFGKFKKLQALSLRNNKLSGDIPHFVGNLSQLYLLDLGDNKFEGNIPPSIGKCQLLQILDLSHNKLRGTIPLEVFNLFSLTNLLDLSHNSLSGSLPKEVGMLKNIDWLDVSENHLSGNIPETIGECISLEYLNLQGNSFNGTIPFSLASHKGMRHLDLSRNQLSGSIPDVMQNISSLEYLNVSFNMLDGEVPTNGVFGNATQVAIIGNNKLCGGISQLHIPPCPIKGRKHTKHHKLRLIAVIVSVVSFLLILSFIITMYWMRKRNQKRSFDSPTIDQLAKISYQELHQGTNGFSPTNLIGSGSFGFVYKANLVSEDHVVAVKVLNLQKKGSHKSFIVECNALKNIRHRNLVKIMTCCSGTDYKGQEFKALVFDYMKNGSLEQWLHPEILNEEHPTTLGLGQRLNVIIDVADALHYLHQECEHLVLHCDLKPNNVLLDDDMVAHVSDFGIARLVLSIGGSSRKDTSSIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDEVFEDGQNLHNFVAISFPDNLMKILDPHIVSRDVEVAIQDGNRENLIPTIEECLVSLFRIGILCSMESPKERMNIADVTGELNKIKKAFLTGVHAHN* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1306 1030 Gene3D Ribonuclease Inhibitor 101 340 IPR032675 -
Tpr2g1306 1030 Gene3D Ribonuclease Inhibitor 38 100 IPR032675 -
Tpr2g1306 1030 Gene3D Phosphorylase Kinase; domain 1 678 797 - -
Tpr2g1306 1030 Pfam Leucine rich repeat N-terminal domain 44 82 IPR013210 -
Tpr2g1306 1030 PANTHER LRR RECEPTOR-LIKE KINASE 30 1025 - -
Tpr2g1306 1030 SUPERFAMILY L domain-like 350 636 - -
Tpr2g1306 1030 PANTHER OS04G0122200 PROTEIN 30 1025 - -
Tpr2g1306 1030 Pfam Protein kinase domain 719 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1306 1030 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Tpr2g1306 1030 Pfam Leucine rich repeat 407 465 IPR001611 GO:0005515
Tpr2g1306 1030 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Tpr2g1306 1030 Gene3D Ribonuclease Inhibitor 341 646 IPR032675 -
Tpr2g1306 1030 ProSiteProfiles Protein kinase domain profile. 716 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1306 1030 SMART LRR_typ_2 404 427 IPR003591 -
Tpr2g1306 1030 SMART LRR_typ_2 229 252 IPR003591 -
Tpr2g1306 1030 SMART LRR_typ_2 452 476 IPR003591 -
Tpr2g1306 1030 SMART LRR_typ_2 133 157 IPR003591 -
Tpr2g1306 1030 SMART LRR_typ_2 597 622 IPR003591 -
Tpr2g1306 1030 SMART LRR_typ_2 477 500 IPR003591 -
Tpr2g1306 1030 SMART LRR_typ_2 525 549 IPR003591 -
Tpr2g1306 1030 SUPERFAMILY Protein kinase-like (PK-like) 691 1013 IPR011009 -
Tpr2g1306 1030 Gene3D Transferase(Phosphotransferase) domain 1 798 1025 - -
Tpr2g1306 1030 SMART serkin_6 716 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1306 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Tpr2g1306 1030 SUPERFAMILY L domain-like 43 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1306 Tpr-Chr2 15286575 15290355 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1306 42 1022 Receptor kinase-like Gene Family AT3G47570 45.968 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1306 Pkinase 1.5e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1306 - - mtr:MTR_5g025930 1336.24