Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1304 ATGCATATGCATGCTTCCTCTCTGTTCCCACAAAACCGCTACTTCTTTCTTCTAAATCAAATGAAGTCATTTTCTTTCTTGTCACCTACACTTTTTCTGCTTTTTCTGTTTACCTTCAATTTAATTGTGGCCGTGGCTGCAATATTAGGAAACCAAACAGATTATTTTGCATTGCTCAAATTCAAAGAATCAATATCCACTGATCCGTATAAAAGTCTGGAATCTTGGAATTCGTCCATCCACTTTTGTAAGTGGCGTGGAATCATATGCAGCCCCATGCATCAAAGAGTTATAGGGTTGAATTTAGAAGGATATAGGTTACATGGATCTTTATCTCCCCATATTGGTAATCTCACTTTACTGAAAAATCTCAACCTTGGAAACAACAGCTTCTATGGAGAAATCCCAAAGGAGTTAGGTAAGTTGCTACAATTGCAACAACTTTATCTCACCAATAACTCTTTTGTAGGTGAAATTCCTACAAACTTGACATATTGCTCCAATCTTAAAGACTTATTCCTGTCAGGGAACAATCTCATTGGTAAAATACCAATTGAAATTGCCTCTTTGAAAATGCTGCAAACCTTGTCTGTTTCTCGTAACAAATTAACCGGAGAAATCCCTTCATTCATAGGGAATTTTTCATCCATAAAGCAGTTAAATTTTGGTCATAACAACTTAGAAGGAGATATTCCACAAGCAATTTGTCTCCTAAAAAACTTGACATTTTTAGCTGTGGGTCTGAACAATTTGTCAGGTAGCCCTCCTTTTTGTCTTTACAATATCACATCACTTACTATGCTTAACATGCCATTGAATAACTTTCATGGCCCTCTTCCATTCAACATGTTCCACACCCTCCCCAATCTCCAATATTTTGAAATGGGGGGAAATCAATTTTCAGGTCTAATCCCCACTTCCTTGAATTCATCTTCTTCCATCATTTTATTTGGTATAAGTAGAAATCATTTTGTTGGACAAGTTCCAAGTCTAGGAAGGCTAAAAGATTTACATTTTCTGATTTTAGAATTGAACAATTTAGGCTATAATTCAACTAAGGATTTGCATTTTTTAAAATCTTTGACAAACTGCAGTAAACTAGAAGCATTTTCTATATCCGATAATAATTTTGGAGGTAATTTGCCAAATTACATTGGCAATTTATCCACTGAACTTACTAACATACATGTTGGAGCTAATCAGATAACAGGAAAAATTCCTAGAGAATTAGGCAATTTAATTGGCTTAATTTTATTGGGCATGGGATCAAACCACTTCGAAGGAATTATTCCAACTACTTTTGGGAAATTTCAAAAGATGCAAGTGTTATCTTTGAGCGAAAACAAGTTGTCGGGGGATATACCACACTTTATAACCAATCTCAGTCAATTGTTTGATTTGAATTTACAGCATAATATGTTCGAAGGAAATATTCCTCGGAGCATAGGAAACTGTCAAAAATTACAAATTTTAGAACTTTCGCATAATAAGATTAGAGGAACCATACCTTTAGAGGTTTTTACTCTTTTTTCTTTAACAAACATCTTGGACTTGTCACATAACTCTTTGAGTGGTAGCTTACCAAAAGAAGTGGGTATGCTAAAAAATATAAATTGGCTAGATGTTTCTGAAAATCATTTATCTGGGAATATTCCCGAAACTATTGGTGAATGCACAAGCTTAGAATACCTTGAGTTGCAAGGGAACTCCTTCAACGGAACAATACCATCCTCTTTGGCTTCTCACAAAGGTCTGCGATATTTAGACCTTTCAAGCAATCAATTCTACGGACCAATTCCTGATGCTATGCAAAACAGCTCTAGCTTAGAATACTTGAATGTTTCTTTCAACATGTTGGAAGGTGAGGTGCCGACACATGGTGTATTTGGAAATGCAACCCAAGTAGCAATTAGTGGAAACAATAAGCTTTGTGGAGGTATTGCAAAACTGCATCTACCACCATGCCATATCAAGGGCACAAAACACCCAAAACACCATAAATTCAGGATGATAATAGTGATAGTTAGTGTGGTTTCTTTCCTTCTCATTCTTTCATTTATTATAACTACCTATTGGATGAGGAAAAGAAATAAAAAACGATCTTTTGATTCACCAACAATTGATCAACTAACTAAGGTTTCATATCAAACCTTACATCGAGGAACCGATGGGTTCTCGACTAGAAACTTGATAGGCTCAGGAAGTTTTGGTTCTGTGTACCGAGGAAATCTTTTGTCAGAAGATAATTTTGTTGCTGTAAAGGTCTTGAACCTACAAAAACAGGGAGCTCACAAGAGTTTTATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGATCTTAACATGTTGTTCGAGTACAGATTACACAGGCCAAGAATTTAAAGCTTTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGATTTTAAATGCAGAGCCTCCAACAACATTAGACCTCAGTCGTAGACTAAACATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATCATGAATGTGAGCAATTGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATAATGACATGGTTGCACATGTGAGTGATTTTGGCATATCAAGACTCATCTTAACCATTGGCGGTACCTCCCATACAGATACCAGTACAATTGGAATAAAGGGAACTGTTGGCTATGCTCCCCCGGAGTATGGAATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCCTTGTGTTGGAAATGCTTACTGGTAGAAGACCCACTGACGAAACTTTGGAAGATGGTCAAAATCTGCATAACTTTGTTTGGATTTCATTTCCTGATAATCTTATAAAGATTTTAGACCCACATATTTTATCAAGAGATGCTGGAGTTTCAATACAAGTTGGAAACAGTGAGAATCTTATTCCAAGGGTAGAGCAGTGCTTAGTTTCACTTTTTAAGATTGGACTTGTTTGTTCGATGGAGTCACCAAAAGAAAGAATGAAAATTGTGGAAGTCAATAGAGAACTAATCATAATAAAAAAGGCCTTTCTTGCCGGTGTTCGCGCTCATAATTAG 3120 0.3603 MHMHASSLFPQNRYFFLLNQMKSFSFLSPTLFLLFLFTFNLIVAVAAILGNQTDYFALLKFKESISTDPYKSLESWNSSIHFCKWRGIICSPMHQRVIGLNLEGYRLHGSLSPHIGNLTLLKNLNLGNNSFYGEIPKELGKLLQLQQLYLTNNSFVGEIPTNLTYCSNLKDLFLSGNNLIGKIPIEIASLKMLQTLSVSRNKLTGEIPSFIGNFSSIKQLNFGHNNLEGDIPQAICLLKNLTFLAVGLNNLSGSPPFCLYNITSLTMLNMPLNNFHGPLPFNMFHTLPNLQYFEMGGNQFSGLIPTSLNSSSSIILFGISRNHFVGQVPSLGRLKDLHFLILELNNLGYNSTKDLHFLKSLTNCSKLEAFSISDNNFGGNLPNYIGNLSTELTNIHVGANQITGKIPRELGNLIGLILLGMGSNHFEGIIPTTFGKFQKMQVLSLSENKLSGDIPHFITNLSQLFDLNLQHNMFEGNIPRSIGNCQKLQILELSHNKIRGTIPLEVFTLFSLTNILDLSHNSLSGSLPKEVGMLKNINWLDVSENHLSGNIPETIGECTSLEYLELQGNSFNGTIPSSLASHKGLRYLDLSSNQFYGPIPDAMQNSSSLEYLNVSFNMLEGEVPTHGVFGNATQVAISGNNKLCGGIAKLHLPPCHIKGTKHPKHHKFRMIIVIVSVVSFLLILSFIITTYWMRKRNKKRSFDSPTIDQLTKVSYQTLHRGTDGFSTRNLIGSGSFGSVYRGNLLSEDNFVAVKVLNLQKQGAHKSFIVECNALKNIRHRNLVKILTCCSSTDYTGQEFKALVFDYMKNGSLEQWLHPEILNAEPPTTLDLSRRLNIIIDVASALHYLHHECEQLVIHCDLKPSNVLLDNDMVAHVSDFGISRLILTIGGTSHTDTSTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILVLEMLTGRRPTDETLEDGQNLHNFVWISFPDNLIKILDPHILSRDAGVSIQVGNSENLIPRVEQCLVSLFKIGLVCSMESPKERMKIVEVNRELIIIKKAFLAGVRAHN* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1304 1039 Gene3D Ribonuclease Inhibitor 51 334 IPR032675 -
Tpr2g1304 1039 Gene3D Phosphorylase Kinase; domain 1 687 806 - -
Tpr2g1304 1039 ProSitePatterns Protein kinases ATP-binding region signature. 731 754 IPR017441 GO:0005524
Tpr2g1304 1039 Gene3D Transferase(Phosphotransferase) domain 1 807 1033 - -
Tpr2g1304 1039 Gene3D Ribonuclease Inhibitor 357 656 IPR032675 -
Tpr2g1304 1039 Pfam Leucine Rich repeat 484 500 IPR001611 GO:0005515
Tpr2g1304 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 856 868 IPR008271 GO:0004672|GO:0006468
Tpr2g1304 1039 SMART serkin_6 725 1031 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1304 1039 PANTHER OS04G0122200 PROTEIN 39 1034 - -
Tpr2g1304 1039 SUPERFAMILY L domain-like 391 645 - -
Tpr2g1304 1039 ProSiteProfiles Protein kinase domain profile. 725 1032 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1304 1039 Pfam Leucine rich repeat N-terminal domain 52 91 IPR013210 -
Tpr2g1304 1039 PANTHER LRR RECEPTOR-LIKE KINASE 39 1034 - -
Tpr2g1304 1039 SUPERFAMILY Protein kinase-like (PK-like) 699 1026 IPR011009 -
Tpr2g1304 1039 Pfam Protein kinase domain 727 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1304 1039 Pfam Leucine rich repeat 560 619 IPR001611 GO:0005515
Tpr2g1304 1039 Pfam Leucine rich repeat 420 473 IPR001611 GO:0005515
Tpr2g1304 1039 SUPERFAMILY L domain-like 52 347 - -
Tpr2g1304 1039 SMART LRR_typ_2 238 261 IPR003591 -
Tpr2g1304 1039 SMART LRR_typ_2 461 485 IPR003591 -
Tpr2g1304 1039 SMART LRR_typ_2 486 509 IPR003591 -
Tpr2g1304 1039 SMART LRR_typ_2 190 214 IPR003591 -
Tpr2g1304 1039 SMART LRR_typ_2 534 558 IPR003591 -
Tpr2g1304 1039 SMART LRR_typ_2 287 310 IPR003591 -
Tpr2g1304 1039 SMART LRR_typ_2 413 436 IPR003591 -
Tpr2g1304 1039 SMART LRR_typ_2 118 142 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1304 Tpr-Chr2 15256205 15260107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1304 51 1037 Receptor kinase-like Gene Family AT3G47570 45.391 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1304 Pkinase 2.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1304 - - mtr:MTR_5g025930 1354.35