Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1302 ATGCATATGCATGCTTCCTCTCTGTTCCCACAAAACCGCTACTTCTTTCTTCTAAATCAAATGAAGTCATTTTCTTTCTTGTCACCTACACTTTTTCTGTTTACCTTCAATTTAATTGTGGCCGTGGCTGCAATATTAGGAAACCAAACAGATTATTTTGCATTGCTCAAATTCAAAGAATCAATATCCACTGATCCGTATAAAAGTCTGGAATCTTGGAATTCGTCCATCCACTTTTGTAAGTGGCGTGGAATCACATGCAGCCCCATGCATCAAAGAGTTATAGGGTTGAATTTAGAAGGATATAGGTTACATGGATCTTTATCTCCCCATATTGGTAATCTCACTTTACTGAAAAATCTCAACCTTGGAAACAACAGCTTCTATGGAGAAATCCCAAAGGAGTTAGGTAAGTTGCTACAATTGCAACAACTTTATCTCACCAATAACTCTTTTGTAGGTGAAATTCCTACAAACTTGACATATTGCTCCAATCTTAAAGACTTATTCCTGTCAGGGAACAATCTCATTGGTAAAATACCAATTGCAATTGCCTCGTTGAAAATGCTTCAAAGAATGTTTCTTACTAGTAACAAATTAACTGGAGGAATCCCTTCATTCATAGGGAATCTTTCATGCTTAACGCGGTTTTCGTTTACCGATAACAACTTAGAAGGAGATATTCCACAGGCAATTTGTCTCCTCAAAAACTTGACAGCTTTAGGAGTGGGTGTGAACAATTTGTCAGGTACCCCTCCTTCTTGTCTTTACAACATCACCTCACTTACTATATTTTACATGCCAATAAATAACTTTCATGGCCCTCTTCCACCCAACATGTTTCACACTCTCCCAAATATCAAACAGTTTGGTATTGCAAAAAATCAATTTTCAGGTCCAATCCCCACTTCTATAAATGCATCTTCTTCCATTACTCATCTCGATATCTCTGACAATAATTTTGTTGGACAAGTTCCAAGTCTAGGAAAGCTAAAAGATTTAAACCATCTGAATTTGGAACTCAACTATTTAGGTAACAATTCCGCTGAGGATTTAGAGTTTTTAAAACCTTTGACAAACTGTAGTAAATTGTATATAGCTTCTTTTAGTCAAAATAACTTTGGAGGCGTTCTGCCAAATTCTATAGGCAATTTAACCAATGAGCTTATAATGCTATATCTTGGGGGTAATATGATATCAGGAAAAATTCCTGCTGAATTAGGTCGTCTAGTTGGCTTAGTGTCATTGTCCCTGGAATCTAACCACTTTGAAGGAGTTATTCCAACTACTTTTGGAAAGTTTCAAACCTTGCAAATGTTAAGTTTAAGAAATAACAAGTTGTCAGGAGATATACCACCCTTTATAGGCAATCTCAGTCAATTGTTTGCATTGGAATTAAATCATAATATGTTTTATGGAGATATTCCTCCAAGCATAGGAAACTGCAAACAGTTACAAAAGCTAGAACTTTCGAATAATAAGCTTACAGGGACCATACCAATAGAGGTTTTTAATCTTTCTTCTATAACAAACTTATTGAATTTGTCACGTAACTCTTTGAGCGGTAACTTACCAAGAGAAGTAGGTATGTTAAAAAATATTTATTGGTTAGATGTCTCTGAGAATCATTTGTTTGGGGACATTCCTGGAACTATTGGTGAATGCACAAGCTTAGAATACCTTCTTTTGCAAGGGAACTCCTTCAACGGAACAATACCATTCTCTTTGGCTTCTCACAATGGTATGCGACATTTAGACCTTTCAAGAAATCAATTGTCTGGATCAATTCCAGATGTTATGCAAAATATCTCTAGCTTAGAGTATTTGAATGTATCTTTTAACATGTTGGATGGTGAGGTACCAACCAATGGTGTCTTTGGAAATGCAACCCAAGTAGCAATTATTGGAAACAATAAGCTTTGTGGAGGTATCTCACAGCTACATATACCACCATGCCCTATCAAGGGCAGAAAACACACAAAACACCATAAAATTAGGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTCTCATACTTTCATTTATTATAACTATGTACTGGATGAGGAAAAGAAATCAAAAACGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGATTTCATACCAAGAATTGCATCAAGGAACCAATGGGTTCTCTCCTACAAACTTGATCGGATCAGGAAGTTTTGGTTTTGTGTACAAAGCAAATCTTGTGTCGGAAGATCATGTTGTTGCCGTAAAGGTCCTGAACCTCCAAAAAAAGGGATCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGATCATGACATGTTGTTCGGGTACAGATTACAAAGGTCAAGAATTCAAAGCTCTAGTTTTTGATTATATGAAAAATGGAAGCTTAGATCAATGGTTGCATCCCGAGATTTTAAATGAAGAGCATGCAACAACATTGGGTCTTGGTCAAAGATTAAACGTAATTATCGATGTTGCTGATGCATTACATTATCTCCACCAAGAATGTGAGCATTTGGTCCTTCATTGTGATCTAAAGCCAAACAATGTTCTTCTTGATGATCATATGGTTGCTCATGTGAGTGATTTCGGAATAGCAAGACTTGTCTTATCCATTGGCGGCAGCTCTTGGAAGGATACAAGTTCAATTGGAATTAAAGGGACAGTTGGGTATGCTCCTCCAGAGTACGGAATGGGTTCCGAAGTTTCCAAATGTGGTGACATGTATAGCTTTGGAATCCTCATGTTGGAAATTCTTACCGGTAGAAGACCTACTGATGAAGTTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTGCAATTTCATTTCCTGATAACCTTATGAAGATTTTAGATCCACATATTGTATCAAGAGATGTAGAAGTAGCAATACAAGATGGAAATCGTGAAAATCTTATTCCAACTATTGAAGAGTGCTTAGTTTCACTTTTTAGGATTGGAATTCTTTGTTCAATGGAATCACCGAAAGAAAGAATGAATATTGCAGATGTCACTGGAGAGCTTAGCAAAATCAAAAAGGGCCTTTCTCACCGGTGTTCACGCTCATAA 3108 0.3636 MHMHASSLFPQNRYFFLLNQMKSFSFLSPTLFLFTFNLIVAVAAILGNQTDYFALLKFKESISTDPYKSLESWNSSIHFCKWRGITCSPMHQRVIGLNLEGYRLHGSLSPHIGNLTLLKNLNLGNNSFYGEIPKELGKLLQLQQLYLTNNSFVGEIPTNLTYCSNLKDLFLSGNNLIGKIPIAIASLKMLQRMFLTSNKLTGGIPSFIGNLSCLTRFSFTDNNLEGDIPQAICLLKNLTALGVGVNNLSGTPPSCLYNITSLTIFYMPINNFHGPLPPNMFHTLPNIKQFGIAKNQFSGPIPTSINASSSITHLDISDNNFVGQVPSLGKLKDLNHLNLELNYLGNNSAEDLEFLKPLTNCSKLYIASFSQNNFGGVLPNSIGNLTNELIMLYLGGNMISGKIPAELGRLVGLVSLSLESNHFEGVIPTTFGKFQTLQMLSLRNNKLSGDIPPFIGNLSQLFALELNHNMFYGDIPPSIGNCKQLQKLELSNNKLTGTIPIEVFNLSSITNLLNLSRNSLSGNLPREVGMLKNIYWLDVSENHLFGDIPGTIGECTSLEYLLLQGNSFNGTIPFSLASHNGMRHLDLSRNQLSGSIPDVMQNISSLEYLNVSFNMLDGEVPTNGVFGNATQVAIIGNNKLCGGISQLHIPPCPIKGRKHTKHHKIRLIAVIVSVVSFLLILSFIITMYWMRKRNQKRSFDSPTIDQLAKISYQELHQGTNGFSPTNLIGSGSFGFVYKANLVSEDHVVAVKVLNLQKKGSHKSFIVECNALKNIRHRNLVKIMTCCSGTDYKGQEFKALVFDYMKNGSLDQWLHPEILNEEHATTLGLGQRLNVIIDVADALHYLHQECEHLVLHCDLKPNNVLLDDHMVAHVSDFGIARLVLSIGGSSWKDTSSIGIKGTVGYAPPEYGMGSEVSKCGDMYSFGILMLEILTGRRPTDEVFEDGQNLHNFVAISFPDNLMKILDPHIVSRDVEVAIQDGNRENLIPTIEECLVSLFRIGILCSMESPKERMNIADVTGELSKIKKGLSHRCSRS* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1302 1035 SUPERFAMILY Protein kinase-like (PK-like) 697 1019 IPR011009 -
Tpr2g1302 1035 Pfam Leucine rich repeat N-terminal domain 49 88 IPR013210 -
Tpr2g1302 1035 ProSiteProfiles Protein kinase domain profile. 722 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1302 1035 Gene3D Transferase(Phosphotransferase) domain 1 804 1033 - -
Tpr2g1302 1035 ProSitePatterns Protein kinases ATP-binding region signature. 728 751 IPR017441 GO:0005524
Tpr2g1302 1035 ProSitePatterns Serine/Threonine protein kinases active-site signature. 853 865 IPR008271 GO:0004672|GO:0006468
Tpr2g1302 1035 Pfam Leucine rich repeat 557 616 IPR001611 GO:0005515
Tpr2g1302 1035 Pfam Leucine rich repeat 413 470 IPR001611 GO:0005515
Tpr2g1302 1035 Gene3D Ribonuclease Inhibitor 48 327 IPR032675 -
Tpr2g1302 1035 SUPERFAMILY L domain-like 356 642 - -
Tpr2g1302 1035 PANTHER LRR RECEPTOR-LIKE KINASE 36 1026 - -
Tpr2g1302 1035 SUPERFAMILY L domain-like 49 344 - -
Tpr2g1302 1035 Pfam Protein kinase domain 725 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1302 1035 Gene3D Ribonuclease Inhibitor 328 661 IPR032675 -
Tpr2g1302 1035 Gene3D Phosphorylase Kinase; domain 1 684 803 - -
Tpr2g1302 1035 PANTHER OS04G0122200 PROTEIN 36 1026 - -
Tpr2g1302 1035 SMART serkin_6 722 1028 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1302 Tpr-Chr2 15235381 15239152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1302 48 1026 Receptor kinase-like Gene Family AT3G47570 44.444 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1302 Pkinase 6.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1302 - - mtr:MTR_5g025930 1322.38