Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1301 ATGTGGTTTACCTTGAATTTAATGTGGTTTGACACTAATAACAAAACTGTGGCAGTGGCTGCAATATTAGGAAACCAAACAGATCATTTGGCATTGCTCAAATTCAAAGAATCAATATCCAGTGATCCGTATAAAAGTCTTGAATCTTGGAATTCTTCCATCCACTTCTGTAAGTGGCGTGGAATCACATGCAACCCCATGCATCAAAGAGTTATAGGATTGAACCTAGGAGGATATCAGGTACATGGATCTTTATCTCCCTATGTTGGTAATCTCACTTTTTTGAAAAATCTCACCCTTCAAAACAACAGCTTCTATGGAGAAATCCCACAAGAGTTGGGTCAGTTGCTACAATTGCAAAAACTTCATCTCTTCAATAACTCTTTTGTAGGTAAAATTCCTACAAACTTGACATATTGCTCCAATCTTAAAGAGTTATACTTGTCTAGGAACAATCTCATTGGTAAAATACCAATTGAAATTGCCTCTTTGAAAAATCTTCAAAGCATGTCTGTTTCTCATAACAAATTAACCGGAGGAATCCCTTCATTCATAGGTAATCTTTCATTCATAACACAACTTGGTTTTGGTCGTAACAACTTAGAAGGAGATATTCCACAGGCAATTTGTCTCCTCAAAAACTTGACACTTTTACGAGTGGGTGTGAACAATTTGTCAGGTACCCCTCCTTCTTGTCTTTACAACATCACATCACTTACTATATTTTTCATGGGAATAAATAACTTTCATGGCCCTCTTCCACCCAACATGTTTCACACCCTCCCAAATATCAAACAGTTTGGTATTGCAGGAAATCATTTTTCAGGTCCAATCCCCACTTCTATAAATGCATCTTCTTCCATTACTTATCTTGATATCCCTGTCAATAATTTTGTTGGACAAGTTCCAAGTCTAGGAAAGCTAAAAGATTTATACCATCTGAATTTGGAATACAACAATTTAGGTAACAATTCAGCTAAGGATTTAGAGTTTTTAAAATCTTTGACAAACTGTAGTAAATTGAAAGACGTTTCTATTTACCATAATTACTTTGGTGGCATTCTTCCAAATTCTATAGGGAATTTATCTACTGAGCTTAATATACTATATCTTGATGCTAATATGATATCAGGAAAAATTCCTGCTGAACTAGGACGTCTAGTTGGCTTAATATCATTGTCCTTAGAATCTAATCAGTTTGAAGGAATTATTCCAACTACTTTTGAAAAGTTTCAAAAATTGCAAATGTTAGATTTGGATGCAAACAAGTTGTCAGGAGATATACCACACTTTATAGGAAATCTCAGTCAATTGTATTATTTGGATTTACATCATAATATGTTCCACGGAAATATTCCTTCTAGCATAGGAAACTGCCAAAAGTTACAATATCTAGATTTTTCGCAGAATAAGCTTAGAGGAACCATACCTTTAGAGGTTTTTAATCTTTTTTCTTTAACAAACCTCTTGAACTTGTCACATAACTCTTTGAGTGGTAGCTTACCAAGAGAAGTGGGTTTGCTGAAAAACATTGATGTATTAGATATCTCTGAGAATCATCTCTCTTGCGATATTCCTAGAACAATTGGTGAATGTATAAGCTTAGAATACCTTTATTTGCAAGGTAACTCCTTCAACGGAACAATACCATCTTCTTTTGCATCTCTCAAAGGTCTTAGATATTTAGACCTTTCAAGAAATCGATTGTCTGGATCAATTCCTGATGTTATGCAAAATATCTCTGTTTTAGAATATTTGAATGTATCTTTTAACATGTTGGATGGTGAGGTACCAACCAATGGTGTCTTTGGAAATGCAACCCAAGTAGCAATGATTGGAAACAATAAGCTTTGTGGAGGTATCTCACAGCTGCATCTACCACCATGCCCTATCAAGGGCAGAAAACACACAAAACACCATAAACTTAGGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTCTCATACTTTCATTTATTACAACTATGTACTGGATGAGGAAAAGAAATCAAAAACGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGATTTCATACCAAGAATTGCATCAAGGAACCAATGGGTTCTCTCCTACAAACTTGATCGGATCAGGAAGTTTTGGTTTTGTGTACAAAGCAAATCTTGTGTCGGAAGATCATGTTGTTGCCGTAAAGGTCCTGAACCTCCAAAAAAAGGGATCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGATCATGACATGTTGTTCGGGTACAGATTACAAAGGTCAAGAATTCAAAGCTCTAGTTTTTGATTATATGAAAAATGGAAGCTTAGATCAATGGTTGCATCCCGAGATTTTAAATGAAGAGCATCCAACAACATTGGGTCTTGGTCAAAGATTAAACGTAATTATCGATGTTGCTGATGCATTACATTATCTCCACCAAGAATGTGAGCATTTGGTCCTTCATTGTGATCTAAAGCCAAACAATGTTCTTCTTGATGATCATATGGTTGCTCATGTGAGTCATTTCGGAATAGCAAGACTTGTCTTATCCATTGGCGGCAGCTCTTGGAAGGATACAAGTTCAATTGGAATTAAAGGGACAGTTGGGTATGCTCCTCCAGAGTACGGAATGGGTTCCGAAGTTTCCAAATGTGGTGACATGTATAGCTTTGGAATCCTCATGTTGGAAATTCTTACCGGTAGAAGACCTACTGATGAAGTTTTTGAAGATGGTCAAAATCTGCATAACTTTGTTGCAATTTCATTTCCTGATAACCTTATGAAGATTTTAGATCCACATATTGTATCAAGAGATGTAGAAGTAGCAATACAAGATGGAAATCGTGAAAATCTTATTCCAACTATTGAAGAGTGCTTAGTTTCACTTTTTAGGATTGGAATTCTTTGTTCAATGGAATCACCGAAAGAAAGAATGAATATTGCAGATGTCACTGGAGAGCTTAGCAAAATCAAAAAGGGCCTTTCTCACCGGTGTTCACGCTCATAA 3039 0.3567 MWFTLNLMWFDTNNKTVAVAAILGNQTDHLALLKFKESISSDPYKSLESWNSSIHFCKWRGITCNPMHQRVIGLNLGGYQVHGSLSPYVGNLTFLKNLTLQNNSFYGEIPQELGQLLQLQKLHLFNNSFVGKIPTNLTYCSNLKELYLSRNNLIGKIPIEIASLKNLQSMSVSHNKLTGGIPSFIGNLSFITQLGFGRNNLEGDIPQAICLLKNLTLLRVGVNNLSGTPPSCLYNITSLTIFFMGINNFHGPLPPNMFHTLPNIKQFGIAGNHFSGPIPTSINASSSITYLDIPVNNFVGQVPSLGKLKDLYHLNLEYNNLGNNSAKDLEFLKSLTNCSKLKDVSIYHNYFGGILPNSIGNLSTELNILYLDANMISGKIPAELGRLVGLISLSLESNQFEGIIPTTFEKFQKLQMLDLDANKLSGDIPHFIGNLSQLYYLDLHHNMFHGNIPSSIGNCQKLQYLDFSQNKLRGTIPLEVFNLFSLTNLLNLSHNSLSGSLPREVGLLKNIDVLDISENHLSCDIPRTIGECISLEYLYLQGNSFNGTIPSSFASLKGLRYLDLSRNRLSGSIPDVMQNISVLEYLNVSFNMLDGEVPTNGVFGNATQVAMIGNNKLCGGISQLHLPPCPIKGRKHTKHHKLRLIAVIVSVVSFLLILSFITTMYWMRKRNQKRSFDSPTIDQLAKISYQELHQGTNGFSPTNLIGSGSFGFVYKANLVSEDHVVAVKVLNLQKKGSHKSFIVECNALKNIRHRNLVKIMTCCSGTDYKGQEFKALVFDYMKNGSLDQWLHPEILNEEHPTTLGLGQRLNVIIDVADALHYLHQECEHLVLHCDLKPNNVLLDDHMVAHVSHFGIARLVLSIGGSSWKDTSSIGIKGTVGYAPPEYGMGSEVSKCGDMYSFGILMLEILTGRRPTDEVFEDGQNLHNFVAISFPDNLMKILDPHIVSRDVEVAIQDGNRENLIPTIEECLVSLFRIGILCSMESPKERMNIADVTGELSKIKKGLSHRCSRS* 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1301 1012 PANTHER OS04G0122200 PROTEIN 16 1003 - -
Tpr2g1301 1012 Pfam Leucine rich repeat 534 593 IPR001611 GO:0005515
Tpr2g1301 1012 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Tpr2g1301 1012 Pfam Leucine rich repeat 390 447 IPR001611 GO:0005515
Tpr2g1301 1012 SUPERFAMILY Protein kinase-like (PK-like) 674 996 IPR011009 -
Tpr2g1301 1012 SMART serkin_6 699 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1301 1012 Gene3D Ribonuclease Inhibitor 338 630 IPR032675 -
Tpr2g1301 1012 Pfam Protein kinase domain 702 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1301 1012 PANTHER LRR RECEPTOR-LIKE KINASE 16 1003 - -
Tpr2g1301 1012 Gene3D Ribonuclease Inhibitor 190 337 IPR032675 -
Tpr2g1301 1012 Gene3D Transferase(Phosphotransferase) domain 1 781 1010 - -
Tpr2g1301 1012 SUPERFAMILY L domain-like 366 619 - -
Tpr2g1301 1012 ProSiteProfiles Protein kinase domain profile. 699 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1301 1012 SMART LRR_sd22_2 556 582 - -
Tpr2g1301 1012 SMART LRR_sd22_2 459 480 - -
Tpr2g1301 1012 SMART LRR_sd22_2 411 437 - -
Tpr2g1301 1012 SMART LRR_sd22_2 164 190 - -
Tpr2g1301 1012 SMART LRR_typ_2 435 459 IPR003591 -
Tpr2g1301 1012 SMART LRR_typ_2 92 116 IPR003591 -
Tpr2g1301 1012 SMART LRR_typ_2 556 579 IPR003591 -
Tpr2g1301 1012 SMART LRR_typ_2 212 235 IPR003591 -
Tpr2g1301 1012 SMART LRR_typ_2 164 188 IPR003591 -
Tpr2g1301 1012 SMART LRR_typ_2 387 410 IPR003591 -
Tpr2g1301 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Tpr2g1301 1012 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Tpr2g1301 1012 ProSitePatterns Protein kinases ATP-binding region signature. 705 728 IPR017441 GO:0005524
Tpr2g1301 1012 Gene3D Ribonuclease Inhibitor 136 189 IPR032675 -
Tpr2g1301 1012 Gene3D Ribonuclease Inhibitor 27 135 IPR032675 -
Tpr2g1301 1012 Gene3D Phosphorylase Kinase; domain 1 660 780 - -
Tpr2g1301 1012 SUPERFAMILY L domain-like 26 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1301 Tpr-Chr2 15216966 15220667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1301 25 1003 Receptor kinase-like Gene Family AT3G47570 45.354 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1301 Pkinase 5.2e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1301 - - mtr:MTR_5g025930 1330.08