Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1298 ATGAAGTCATTTTCTTTCTTGTCACCTACACTTTTTCTGCTTTTTCTGTTTACCTTCAATTTAATTGTGGCCGTGGCTGCAATATTAGGAAACCAAACAGATTATTTTGCATTGCTCAAATTCAAAGAATCAATATCCACTGATCCGTATAAAAGTCTGGAATCTTGGAATTCGTCCATCCACTTTTGTAAGTGGCGTGGAATCACATGCAGCCCCATGCATCAAAGAGTTATAGGGTTGAATTTAGAAGGATATAGGTTACATGGATCTTTATCTCCCCATGTTGCCAATCTCACTTTTCTAAAAAATCTCAACCTTAGAAATAATAGCTTCTTTGGAGAAATCACACAGGAGTTGGGTCAGTTGCTACAATTGCAACAACTTTATCTCGATTATAACTCATTTGTAGGTAAAATTCCTACAAACTTGACATATTGCACCAATCTTAAATGGTTAATCTTGGATAGGAACAATCTCATTGGTAAAATACCAATTGAAATTGCCTCTTTGAAAATGCTGCAAACCTTGTCTGTTTCTAGTAACAAATTAACCGGAGAAATCCCTTCATTCATAGGGAATTTTTCATCCATAAAGCAGTTAAATTTTGGTCATAACAACTTAGAAGGAGATATTCCACAAGCAATTTGTCTGCTAAAAAACTTGACATTTTTAGCTGTGGGTCTGAACAATTTGTCAGGTAGCCCTCCTTTTTGTCTTTACAACATCACATCACTTACTATGCTTAACATGCCATTGAATAACTTTCATGGCCCTCTTCCATTCAACATGTTCCACACCCTCCCCAATCTCCAATATTTAGAAATGGGAGGAAATCAATTTTCAGGTCTAATCCCCACTTCCTTGAATTCATCTTCTTCCATCATTTTATTTGATATAAGTAGTAATCATTTTGTTGGACAAGTTCCAAGTCTAGGAAGGCTAAAAGATTTACATTTTCTGATTTTAGAATTGAACAATTTAGGCTATAATTCAACTAAGGATTTGCATTTTTTAAAATCTTTGACAAACTGCAGTAAACTAGAAGCATTTTCTATATCCGATAATAATTTTGGAGGTAATTTGCCAAATTACATTGGCAATTTATCCACTGAACTTACTAACATACATGTTGGAGCTAATCAGATAACAGGAAAAATTCCTAGAGAATTAGGCAATTTAATTGGCTTAATTTTATTGGCCATGGGATCAAACCACTTCGAAGGAATTATTCCAACTACATTTGGGAAATTTCAAAAGATGCAAGTGTTATCTTTGAGCGAAAACAAGTTGTCGGGGGATATACCACACTTTATAACCAATCTCAGTCAATTGTTTGATTTGAATTTACAGCATAATATGTTTGAAGGAAATATTCCTCGGAGCATAGGAAACTGTCAAAAATTACAAATTTTAGAACTTTCGCATAATAAGATTAGAGGAACCATACCTTTAGAGGTTTTTACTCTTTTTTCTTTAACAAACATCTTGGACTTGTCACATAACTCTTTGAGTGGTAGCTTACCAAGAGAAGTGGGTATGCTAAAAAATATAGATTGGCTAGACGTCTCTGAGAATCATTTGTCTGGGAATATTCCCGAAACTATTGGTGAATGCACAAGCTTAGAATACCTTCTTTTGGAAGGGAACTCCTTCAATGGAACAATACCATCCTCTTTGGCTTCTCACAAAGGTCTGCGATATTTAGACCTTTCAAGCAATCAATTCTACGGACCAATTCCTGATGCTATGCAAAACATCTCTAGCTTAGAATACTTGAATGTTTCTTTCAACATGTTGGAAGGTGAGGTGCCGACACATGGTGTATTTGGAAATGCAACCCAAGTAGCAATTAGTGGAAACAATAAGCTTTGTGGAGGTATTGCACAACTGCATCTACCACCATGCCATATCAAGGGCATAAAACACCCAAAACACCATAAATTCAGGATGATAATAGTGATAGTTAGTGTGGTTTCTTTCCTTCTCATTCTTTCATTTATTATAACTACCTATTGGATGAGGAAAAGAAATAAAAAACGATCTTTTGATTCACCAACAATTGATCAACTAACTAAGGTTTCATATCAAACCTTACATCGAGGAACCGATGGGTTCTCAACTAGAAACTTGATAGGCTCAGGAAGTTTTGGTTCTGTGTACCGAGGAAATCTTGTGTCAGAAGATAATTTTGTTGCTGTAAAGGTCTTGAACCTACAAAAACAGGGAGCTCACAAGAGTTTTATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGATCTTAACATGTTGTTCGAGTACAGATTACACAGGCCAAGAATTTAAAGCTTTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGATTTTAAATGCAGAGCCTCCAACAACATTGGACCTCGGTCAAAGATTAAACATCATTATCGATGTTGCTTCTGCATTACATTATCTTCATCATGAATGTGAGCAGTTGGTCATTCACTGTGATCTAAAGCCAAGCAATGTCCTTCTTGATAATGACATGGTTGCACATGTGAGTGATTTTGGCATATCAAGACTCATCTTCACCATTGGCGGTACCTCCCATACAGTTACCAGTACAATTGGAATAAAGGGAACTGTTGGCTATGCTCCCCCGGAGTATGGAATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATTCTAATATTGGAAATGCTTACTGGTAGAAGACCCACCGATGAAACTTTGGAAGATGGTCAAAATCTGCATAACTTTCTTCGGATTTCATTTCCTGATAATCTTATAAAGATTTTAGACCCACATATTGTATCAAGAGATGCTGGAGTTTCAATACAAGATGGAAACAGTGAGAATCTTATTCCAAGGATAGAGCAGTGCTTAGTTTCACTTTTTAAGATTGGACTTGTTTGTTCGATGGAGTCACCAAAAGAAAGAATGAATATTGTGGAAGTTAATAGAGAACTTATCATAATCAAAAAGGCCTTTCTTGCCGGTGTTCGCGCTCTTCATTAG 3060 0.3595 MKSFSFLSPTLFLLFLFTFNLIVAVAAILGNQTDYFALLKFKESISTDPYKSLESWNSSIHFCKWRGITCSPMHQRVIGLNLEGYRLHGSLSPHVANLTFLKNLNLRNNSFFGEITQELGQLLQLQQLYLDYNSFVGKIPTNLTYCTNLKWLILDRNNLIGKIPIEIASLKMLQTLSVSSNKLTGEIPSFIGNFSSIKQLNFGHNNLEGDIPQAICLLKNLTFLAVGLNNLSGSPPFCLYNITSLTMLNMPLNNFHGPLPFNMFHTLPNLQYLEMGGNQFSGLIPTSLNSSSSIILFDISSNHFVGQVPSLGRLKDLHFLILELNNLGYNSTKDLHFLKSLTNCSKLEAFSISDNNFGGNLPNYIGNLSTELTNIHVGANQITGKIPRELGNLIGLILLAMGSNHFEGIIPTTFGKFQKMQVLSLSENKLSGDIPHFITNLSQLFDLNLQHNMFEGNIPRSIGNCQKLQILELSHNKIRGTIPLEVFTLFSLTNILDLSHNSLSGSLPREVGMLKNIDWLDVSENHLSGNIPETIGECTSLEYLLLEGNSFNGTIPSSLASHKGLRYLDLSSNQFYGPIPDAMQNISSLEYLNVSFNMLEGEVPTHGVFGNATQVAISGNNKLCGGIAQLHLPPCHIKGIKHPKHHKFRMIIVIVSVVSFLLILSFIITTYWMRKRNKKRSFDSPTIDQLTKVSYQTLHRGTDGFSTRNLIGSGSFGSVYRGNLVSEDNFVAVKVLNLQKQGAHKSFIVECNALKNIRHRNLVKILTCCSSTDYTGQEFKALVFDYMKNGSLEQWLHPEILNAEPPTTLDLGQRLNIIIDVASALHYLHHECEQLVIHCDLKPSNVLLDNDMVAHVSDFGISRLIFTIGGTSHTVTSTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILILEMLTGRRPTDETLEDGQNLHNFLRISFPDNLIKILDPHIVSRDAGVSIQDGNSENLIPRIEQCLVSLFKIGLVCSMESPKERMNIVEVNRELIIIKKAFLAGVRALH* 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1298 1019 Gene3D Transferase(Phosphotransferase) domain 1 787 1012 - -
Tpr2g1298 1019 Pfam Protein kinase domain 707 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1298 1019 SUPERFAMILY L domain-like 371 625 - -
Tpr2g1298 1019 ProSiteProfiles Protein kinase domain profile. 705 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1298 1019 SMART LRR_typ_2 170 194 IPR003591 -
Tpr2g1298 1019 SMART LRR_typ_2 393 416 IPR003591 -
Tpr2g1298 1019 SMART LRR_typ_2 267 290 IPR003591 -
Tpr2g1298 1019 SMART LRR_typ_2 122 146 IPR003591 -
Tpr2g1298 1019 SMART LRR_typ_2 441 465 IPR003591 -
Tpr2g1298 1019 SMART LRR_typ_2 514 538 IPR003591 -
Tpr2g1298 1019 SMART LRR_typ_2 466 489 IPR003591 -
Tpr2g1298 1019 SMART LRR_typ_2 218 241 IPR003591 -
Tpr2g1298 1019 SMART LRR_typ_2 586 611 IPR003591 -
Tpr2g1298 1019 Gene3D Ribonuclease Inhibitor 31 314 IPR032675 -
Tpr2g1298 1019 PANTHER OS04G0122200 PROTEIN 20 1014 - -
Tpr2g1298 1019 Pfam Leucine rich repeat 540 599 IPR001611 GO:0005515
Tpr2g1298 1019 Pfam Leucine rich repeat 399 453 IPR001611 GO:0005515
Tpr2g1298 1019 Gene3D Ribonuclease Inhibitor 329 636 IPR032675 -
Tpr2g1298 1019 Gene3D Phosphorylase Kinase; domain 1 667 786 - -
Tpr2g1298 1019 SUPERFAMILY Protein kinase-like (PK-like) 679 1006 IPR011009 -
Tpr2g1298 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Tpr2g1298 1019 SMART serkin_6 705 1011 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1298 1019 ProSitePatterns Protein kinases ATP-binding region signature. 711 734 IPR017441 GO:0005524
Tpr2g1298 1019 SUPERFAMILY L domain-like 32 327 - -
Tpr2g1298 1019 PANTHER LRR RECEPTOR-LIKE KINASE 20 1014 - -
Tpr2g1298 1019 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1298 Tpr-Chr2 15191486 15195298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1298 31 1017 Receptor kinase-like Gene Family AT3G47570 44.890 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1298 Pkinase 9.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1298 - - mtr:MTR_5g025930 1308.51