Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1295 ATGTATCTTCTCTATTCCCAAATGAAGTCTTTTTCTTTGTTGTCACCTACACTTCTTTTCCTGTTTACCTTAAATTTAATGTGCTTCTTCGACCAAAACAAAATTGTGGCAGTGGCTGCAATATTAGGAAACCAAACAGATCATTTTGCATTGCTCAAATTCAAAGAATCAATATCCAGTGATCCCTATAAAAGTCTTGAATCTTGGAATTCTTCCATCCACTTCTGTAAGTGGCATGGAGTCACATGCAACCCCGTGAATCAAAGAGTTATAGGGTTGGACCTAGTAGGATATCATTTACATGGATCTTTATCTCCCCATATTGGCAATTTCACTTTTATGAAATATCTCTACCTTGCAAACAACAGCTTCTATGGAGAAATCCCACAGGAGTTGGGTCAGTTGCTACAATTGCAACAACTTTATCTCACCAATAACTCTTTTGTAGGTAAAATTCCTACAAACTTGACATATTGCTCCAATCTCAATGACTTATTCTTGGAAGGGAACAATCTCATTGGTAAAATACCAATTGAAATTGGCTCTTTGAAAAAGCTTCAAACAATTATTGTTTATAAAAACAAATTAACTGGAGGAATCCCTTCATTCATAGGGAATCTTTCATTCATAACACGACTTGGTTTTAGTCAAAACAACTTAGAAGGAGATATTCCACAAGCTATTTGTCGCCTCAAAAACTTGACAGTTTTAGGTGTGGGTGAGAACAATTTGTCAGGTACCCCTCCTTCTTGTCTTTACAACATCACATCACTTACTATATTTTACATGGCATTTAATAACTTTCATGGCCCTCTTCCACCCAACATGTTTCACAACCTCCCAAATATCCAAGAGTTTGGCATTTCAGGAAATCAATTTTCAGGTCCAATCCCCACTTCTATAAATGCCTCTTCTTCCATTAAAATACTTGATATCTCTAACAATTCTTTTGTTGGACAAGTTCCAAGTCTAGGAAAGCTAAAAGATTTATACTTTCTGAATTTGGAACTCAACAATTTAGGTAACAATTCCGCTAAGGATTTAGAGTTTCTAAAATCTTTGACAAACTGTAGCAAATTGTATTTAGCTTCTTTTGATCAAAATAACTTTGGAGGCGTTCTGCCGAATTCTATAGGCAATTTAACCAATGAGCTTAAAATACTGTATCTAGGGGGTAATATGATATCAGGAAAAATTCCTGCTGAATTAGGTCGTCTAGTTAACTTAATATCACTGTCCTTGGAATCTAACCACTTTGAAGGAGTTATTCCAACTACTTTTGGAAAGTTTCAAAAATTGCAAATGTTACGTTTGAGTGTAAACAAGTTGTCAGGTGATATACCACTCTTTATAAGAAATCTCAGTCAATTGTACCAGTTGGATTTATATCGTAATATATTTGATGGAAATATTCCTCCAAGTATAGGAAACTGTCAAAAGTTACAATTTCTAGATCTTTCTCATAATAAGCTTAGAGGAACCATACCTTTAGAGGTTTTTAATCTTTTTTCTTTAACAAACCGCCTAGACTTGTCACATAACTCTTTGAGTGGTAGCTTACCAAGAGAAGTGGGTATGCTAAAACATATTGTTTGGCTAGATGTCTCTGAGAATCATTTGATTGGGGACATCCCTGAAACTATTGGTGAATGCGTAAGCTTAGAGCACCTCAACTTACAAGGGAACTACTTTGACGGAACAATACCATCCTCTTTCGCATCTCTCAAAGATCTGCGATATTTAGACTTTTCAAGAAATCAACTGTCTGGTTCAATTCCCAATGTTATGCAAAATATCTCTGTTTTAGAACATTTGAATGTATCTTTTAACATGTTGGAAGGTGAGGTGCCAACAAATGGTGTCTTTGCAAATGCAACCCAAGTAGCAATGACAGGAAACAGTAAGCTTTGTGGAGGTATTTCTCAAATGCATCTACCACCATGTCCTATCACCCGTAGGAAACACACAAAACACCATAAATTCAGGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTCTCATTATTTCATTTATTATATTTATGTACTGGATGAGGAAAAGAAATCAAAAACGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGATTTCATACCAAGAATTGCATCAAGGAACCGATGGGTTCTCGCCTACAAACTTGATCGGATCAGGAAGTTTTGGGTCTGTGTACAAAGCAAATCTTGCGTCAGAAGATCACGTTGTTGCCGTAAAAGTCCTGAACCTCCAAAAAAACGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCGCTCAAAAATATTAGACACCGAAATTTAGTTAAGATCATAACATGTTGTTCAAGTACAGATTACAAAGGTCAAGAATTCAAAGCTCTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAGTGGTTGCATCCCGAGATTTTTAATGAAGAGCATCCAACAACATTGGGCCTTGGTCAAAGATTAAACGTAATTATCGATGTTGCTGATGCATTACATTATCTCCAACAAGAATGTGAGCAATTGGTCCTTCATTGTGATCTAAAGCCAAACAATGTCCTTCTTGACGATGATATGGTTGCTCATGTGAGTGATTTTGGAATAGCAAGACTTGTCTTAACCATTGGCAGCAACTCTCAGAAGGATACTAGTACAATTGGAATAAAAGGGACCGTTGGTTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTTTCCACATGCGGTGACATGTATAGTTTTGGAATTCTCGTGTTGGAAATGCTTACTGGTAGAAGACCTACTGATGAAGTTTTTGAAGAGGGTCAAAATCTGCATAATTTTGTTGCAATTTCATTTCCTGATAACCTTATGAAGATTTTAGATCCACATCTTGTATCAAGAGATATAGAAGTAGCAATACAAGATGGAAATCGTGAAAATCTTATTCCAACTATTGAAGAGTGCTTAGTTTCACTTTTTAGGATTGGAATTATTTGTTCGATGGAATCACCGAAAGAAAGAATGAATATTGCAGATGTCACAGGAGAGCTTAGCAAAATCAAAAAGGCCTTTTTCACCGGTGTTCACGCTCATAATTAG 3099 0.3604 MYLLYSQMKSFSLLSPTLLFLFTLNLMCFFDQNKIVAVAAILGNQTDHFALLKFKESISSDPYKSLESWNSSIHFCKWHGVTCNPVNQRVIGLDLVGYHLHGSLSPHIGNFTFMKYLYLANNSFYGEIPQELGQLLQLQQLYLTNNSFVGKIPTNLTYCSNLNDLFLEGNNLIGKIPIEIGSLKKLQTIIVYKNKLTGGIPSFIGNLSFITRLGFSQNNLEGDIPQAICRLKNLTVLGVGENNLSGTPPSCLYNITSLTIFYMAFNNFHGPLPPNMFHNLPNIQEFGISGNQFSGPIPTSINASSSIKILDISNNSFVGQVPSLGKLKDLYFLNLELNNLGNNSAKDLEFLKSLTNCSKLYLASFDQNNFGGVLPNSIGNLTNELKILYLGGNMISGKIPAELGRLVNLISLSLESNHFEGVIPTTFGKFQKLQMLRLSVNKLSGDIPLFIRNLSQLYQLDLYRNIFDGNIPPSIGNCQKLQFLDLSHNKLRGTIPLEVFNLFSLTNRLDLSHNSLSGSLPREVGMLKHIVWLDVSENHLIGDIPETIGECVSLEHLNLQGNYFDGTIPSSFASLKDLRYLDFSRNQLSGSIPNVMQNISVLEHLNVSFNMLEGEVPTNGVFANATQVAMTGNSKLCGGISQMHLPPCPITRRKHTKHHKFRLIAVIVSVVSFLLIISFIIFMYWMRKRNQKRSFDSPTIDQLAKISYQELHQGTDGFSPTNLIGSGSFGSVYKANLASEDHVVAVKVLNLQKNGAHKSFIVECNALKNIRHRNLVKIITCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPEIFNEEHPTTLGLGQRLNVIIDVADALHYLQQECEQLVLHCDLKPNNVLLDDDMVAHVSDFGIARLVLTIGSNSQKDTSTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILVLEMLTGRRPTDEVFEEGQNLHNFVAISFPDNLMKILDPHLVSRDIEVAIQDGNRENLIPTIEECLVSLFRIGIICSMESPKERMNIADVTGELSKIKKAFFTGVHAHN* 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1295 1032 SMART LRR_typ_2 527 551 IPR003591 -
Tpr2g1295 1032 SMART LRR_typ_2 406 429 IPR003591 -
Tpr2g1295 1032 SMART LRR_typ_2 135 159 IPR003591 -
Tpr2g1295 1032 SMART LRR_typ_2 231 254 IPR003591 -
Tpr2g1295 1032 SMART LRR_typ_2 478 502 IPR003591 -
Tpr2g1295 1032 SMART LRR_typ_2 255 279 IPR003591 -
Tpr2g1295 1032 SMART LRR_typ_2 575 598 IPR003591 -
Tpr2g1295 1032 Pfam Leucine rich repeat N-terminal domain 46 84 IPR013210 -
Tpr2g1295 1032 Gene3D Phosphorylase Kinase; domain 1 699 799 - -
Tpr2g1295 1032 ProSiteProfiles Protein kinase domain profile. 718 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1295 1032 PANTHER OS04G0122200 PROTEIN 32 1026 - -
Tpr2g1295 1032 Gene3D Ribonuclease Inhibitor 46 154 IPR032675 -
Tpr2g1295 1032 Gene3D Ribonuclease Inhibitor 210 276 IPR032675 -
Tpr2g1295 1032 Gene3D Ribonuclease Inhibitor 155 209 IPR032675 -
Tpr2g1295 1032 SUPERFAMILY L domain-like 355 638 - -
Tpr2g1295 1032 Pfam Leucine rich repeat 233 293 IPR001611 GO:0005515
Tpr2g1295 1032 Pfam Leucine rich repeat 553 612 IPR001611 GO:0005515
Tpr2g1295 1032 ProSiteProfiles Leucine-rich repeat profile. 480 501 IPR001611 GO:0005515
Tpr2g1295 1032 SUPERFAMILY Protein kinase-like (PK-like) 693 1015 IPR011009 -
Tpr2g1295 1032 ProSitePatterns Serine/Threonine protein kinases active-site signature. 849 861 IPR008271 GO:0004672|GO:0006468
Tpr2g1295 1032 PANTHER LRR RECEPTOR-LIKE KINASE 32 1026 - -
Tpr2g1295 1032 SMART serkin_6 718 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1295 1032 ProSitePatterns Protein kinases ATP-binding region signature. 724 747 IPR017441 GO:0005524
Tpr2g1295 1032 Gene3D Ribonuclease Inhibitor 277 354 IPR032675 -
Tpr2g1295 1032 SUPERFAMILY L domain-like 45 340 - -
Tpr2g1295 1032 Gene3D Transferase(Phosphotransferase) domain 1 800 1027 - -
Tpr2g1295 1032 Gene3D Ribonuclease Inhibitor 355 649 IPR032675 -
Tpr2g1295 1032 Pfam Protein kinase domain 721 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1295 Tpr-Chr2 15146085 15149845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1295 44 1025 Receptor kinase-like Gene Family AT3G47570 45.116 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1295 Pkinase 3.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1295 - - mtr:MTR_5g025930 1337.78