Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1294 ATGAAGCCTTTTTCTTTCTCGTTGTCTATATTTTTGCATACAAACCTTCATATGCATATTTTCTTTGTTTTAAGCATAATCTGGTTTGGCTCAAATAAAACTATGGGCTTAGCATTCGGAAATCAAACTGACCATTTGGCATTGCTCAAATTCAAAGAATCAATATCCAATGATCCAAATGGAGTCTTAGATTCTTGGAATAGTTCTATCCACTTTTGCAACTGGCATGGAATCACATGCAGCCTCAAACACCAAAGAGTAACAGAGATGAACATATCGGGACACCACTTGCGTGGATCCTTATCTCCTTATGTTGGCAATCTCTCTTTTCTGAGAAGTCTCAATCTCGGAAACAACCACTTCTTTGAAAAAATTCCGCAAGGTTTGGGACGATTGTTTCGATTGCAACAACTCTCTCTTCCCAATAACTCCTTCATAGGAGAAATTCCTACAAACCTAACAAATTTATATAATCTCAAAAGCTTAGACTTAGGTGGAAATCATCTGATTGGTAAAATACCAATTGAAATTGGCTCTCTTTGGAAGCTTCAGACATTAAAGATTGTGGAAAACAATTTAACCGGAGAAGTCCCACCATTCCTAGGTAACCTTTCATCCTTGACAACTTTATATGTAGGTTATAACAACTTAGAGGGAGTTATTCCACACGAAGTATGTCGTCTCAAAAACTTGACCAAATTATCAGTGGTGGCCAACAAATTGTCTGGTACACTCTCTTCTTGTGTTTATAATATTTCATTTCTTACTATAATCTCGGCTGCAATGAATAACTTTAATGGCTCTCTTAGGTCCAACATGTTTCACACCCTCCCTAGCCTCCAATATTTTGCAATTAGCATGAATCAAATTTCAGGTTTAATACCTACTTCAGTTGCAAATGCTTCTACCTTGACACTTTTTGATATCAGTCGAAATCATTTTTTTGGACCAGTTCCAAGTCTAGGTAAGCTACAAAATCTTTATTGGCTAGATTTGTACCTCAACAATCTAGGTGACAATTCATCTAAGGATTTGGAGTTCTTAAAACCACTCACAAATTTTAGTAAATTGTCTACACTTGGTATATCCTTTAATAATTTTGGAGGTAGTTTGCCAACTTACATAGGTAACTTAACCACCCAACTTAATCGACTGTATCTTGGGGGTAATCAAATATTTGGGCAAATTCCTTTAGAAATAGGAAATTTAATTAATTTAATTCTCTTGACCATGGAAAGTAACCATTTTGAAGGGAAAATTCCTTCTACTATTGGAAAGTTACAAAAGATACAAGTGTTAGATTTGCGTGGAAACAGGTTGTCAGGAGAAATTCCAGCTTCCATAGGTAACCTTAGTCAAATTTATCATTTGGGTTTAGGGAAAAATATGTTAGAAGGAAATATTCCTTCAAATATAGGAAAGTGTAAAAACTTACAAATGTTATACCTTTCGGAAAACAACCTTACAGGAGTGATACCCTCAGAGGTTTTCAGTCTTTCATCTTTAACAACAGGACTATTCTTATCACAAAACTTGTTGAGTGGCAAACTACCTGATGAAGTCGGTCATTTACAGAATATTGGGCAGATTGATGTCTCTGAAAATCATCTAATTGGCGAAATTCCTGGTACCTTGGGTGAATGCATAAGCTTAGAATACACTCTTTTGATGGGGAACTCGTTCAATGGAAGCATACCCTCTTCTTTCGCATCTCTCAAAGGTCTTCGATACTTAGACCTTTCAAGAAATCGATTGTCAGGATCAATTCCAAAATTTCTGCAAAATATTTCTTTCTTAGAATACTTCAATGTGTCTTTCAACATGTTGGAAGGAGAGGTACCAAGTGGAGGTGTCTTTCGAAATTCAAGTGCATTAGGAGTGACTCGTAACAAAAATCTTTGTGGAGGAATTTTGGAGTTGCATCTACCGCCATGCCATACTAAACACAATAGCTTCAAGAAGATAGTTGTGATAGTTAGCGGGATTTCTTTTCTTCTCATTATGATATTTATTATAACAATCTATTGGATGAGGAGAATAGACAAAACACAAAATTTTGATTCACAAATAAATGACCAAATGGTTCCGATTTCATACAAAAACCTGCACAATGCAACCAATGGATTTTCAACAAGTAACTTGATAGGATTAGGAAATTTTGGTTCTGTCTACAAAGGAAAGCTCGAGTCGGTTGATGGATTTGTTGCCATAAAAGTCCTAAACCTTAATAAAACGGGAGCCCAGAAGAGTTTCATTGCTGAATGTACTGCACTAAAAAATATTAGACACCGAAATCTGGTTAAAATTTTGACATGTTGTTCCAGCATAGATTACAAAGGCAATGAGTTTAAAGCTCTCATATTTGAGTACATGAGTAATGGAAACTTAGAAAGTTGGTTGCATCCGACAACAGAAATTCCGGATCAACCAAAATCACTGACTCTTGAGCAAAGGTTAAATATTATTATTGATGTTGCGTCTGCATTTTGTTATCTTCACTACGAATGCGAGCAACCTGTTGTCCATTGTGATTTAAAGCCTGCAAATGTTCTTCTCAATGACTCTCTGCTAGCTCAAGTGAGTGATTTTGGCTTAGCAAGGTTGCTCCCAAGCGTTGGAATCTCTCTAATGCAAAGTAGCACAATTGGAATAAAGGGGACAATTGGCTATGCACCCCTAGAGTATGGAATGGGATCTGAGGTGTCAATTGAAGGTGATATGTATAGCTTTGGAATACTGATATTAGAAATGTTAACTGGAAGAAGACCAACAGATGAAATGTTCAAAGACGATCATAATATCCATAATTATGTGAAACATTCAATTCCAAATCACCTTTTCCATATTGTGGACCAGTCTATTCTAGATCTCCCCATTGAATTAGACCACAATACTGACAATGGGAACCTTGGTGGTATACATCCTAATTTAGAGAAATGTTTACTTGCAATTTTTAGTATTGCACTTTCTTGTTCAGTGGAATCACCAAAAGAAAGAATGAATATGGTTGATGTTATAAGGGAGCTCAATATCATTAAAAGTTTCTTTCCTACGGAGGCTCAATAA 3066 0.3601 MKPFSFSLSIFLHTNLHMHIFFVLSIIWFGSNKTMGLAFGNQTDHLALLKFKESISNDPNGVLDSWNSSIHFCNWHGITCSLKHQRVTEMNISGHHLRGSLSPYVGNLSFLRSLNLGNNHFFEKIPQGLGRLFRLQQLSLPNNSFIGEIPTNLTNLYNLKSLDLGGNHLIGKIPIEIGSLWKLQTLKIVENNLTGEVPPFLGNLSSLTTLYVGYNNLEGVIPHEVCRLKNLTKLSVVANKLSGTLSSCVYNISFLTIISAAMNNFNGSLRSNMFHTLPSLQYFAISMNQISGLIPTSVANASTLTLFDISRNHFFGPVPSLGKLQNLYWLDLYLNNLGDNSSKDLEFLKPLTNFSKLSTLGISFNNFGGSLPTYIGNLTTQLNRLYLGGNQIFGQIPLEIGNLINLILLTMESNHFEGKIPSTIGKLQKIQVLDLRGNRLSGEIPASIGNLSQIYHLGLGKNMLEGNIPSNIGKCKNLQMLYLSENNLTGVIPSEVFSLSSLTTGLFLSQNLLSGKLPDEVGHLQNIGQIDVSENHLIGEIPGTLGECISLEYTLLMGNSFNGSIPSSFASLKGLRYLDLSRNRLSGSIPKFLQNISFLEYFNVSFNMLEGEVPSGGVFRNSSALGVTRNKNLCGGILELHLPPCHTKHNSFKKIVVIVSGISFLLIMIFIITIYWMRRIDKTQNFDSQINDQMVPISYKNLHNATNGFSTSNLIGLGNFGSVYKGKLESVDGFVAIKVLNLNKTGAQKSFIAECTALKNIRHRNLVKILTCCSSIDYKGNEFKALIFEYMSNGNLESWLHPTTEIPDQPKSLTLEQRLNIIIDVASAFCYLHYECEQPVVHCDLKPANVLLNDSLLAQVSDFGLARLLPSVGISLMQSSTIGIKGTIGYAPLEYGMGSEVSIEGDMYSFGILILEMLTGRRPTDEMFKDDHNIHNYVKHSIPNHLFHIVDQSILDLPIELDHNTDNGNLGGIHPNLEKCLLAIFSIALSCSVESPKERMNMVDVIRELNIIKSFFPTEAQ* 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1294 1021 SMART serkin_6 709 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1294 1021 SMART LRR_typ_2 475 499 IPR003591 -
Tpr2g1294 1021 SMART LRR_typ_2 277 300 IPR003591 -
Tpr2g1294 1021 SMART LRR_typ_2 108 132 IPR003591 -
Tpr2g1294 1021 SMART LRR_typ_2 204 228 IPR003591 -
Tpr2g1294 1021 SMART LRR_typ_2 572 595 IPR003591 -
Tpr2g1294 1021 SMART LRR_typ_2 427 451 IPR003591 -
Tpr2g1294 1021 SMART LRR_typ_2 156 180 IPR003591 -
Tpr2g1294 1021 PANTHER OS04G0122200 PROTEIN 29 1018 - -
Tpr2g1294 1021 SUPERFAMILY L domain-like 41 337 - -
Tpr2g1294 1021 Gene3D Transferase(Phosphotransferase) domain 1 791 1017 - -
Tpr2g1294 1021 Gene3D Ribonuclease Inhibitor 43 193 IPR032675 -
Tpr2g1294 1021 SUPERFAMILY L domain-like 351 635 - -
Tpr2g1294 1021 Gene3D Ribonuclease Inhibitor 255 647 IPR032675 -
Tpr2g1294 1021 SMART LRR_sd22_2 475 496 - -
Tpr2g1294 1021 SMART LRR_sd22_2 427 453 - -
Tpr2g1294 1021 SMART LRR_sd22_2 228 254 - -
Tpr2g1294 1021 SMART LRR_sd22_2 204 225 - -
Tpr2g1294 1021 SMART LRR_sd22_2 572 598 - -
Tpr2g1294 1021 PANTHER LRR RECEPTOR-LIKE KINASE 29 1018 - -
Tpr2g1294 1021 Gene3D Ribonuclease Inhibitor 194 254 IPR032675 -
Tpr2g1294 1021 Gene3D Phosphorylase Kinase; domain 1 673 790 - -
Tpr2g1294 1021 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Tpr2g1294 1021 Pfam Protein tyrosine and serine/threonine kinase 712 939 IPR001245 GO:0004672|GO:0006468
Tpr2g1294 1021 ProSiteProfiles Protein kinase domain profile. 709 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1294 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Tpr2g1294 1021 Pfam Leucine rich repeat 182 241 IPR001611 GO:0005515
Tpr2g1294 1021 SUPERFAMILY Protein kinase-like (PK-like) 689 1011 IPR011009 -
Tpr2g1294 1021 Pfam Leucine Rich Repeat 158 178 IPR001611 GO:0005515
Tpr2g1294 1021 Pfam Leucine Rich Repeat 575 595 IPR001611 GO:0005515
Tpr2g1294 1021 Pfam Leucine Rich Repeat 429 451 IPR001611 GO:0005515
Tpr2g1294 1021 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1294 Tpr-Chr2 15138178 15142295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1294 38 1016 Receptor kinase-like Gene Family AT3G47570 45.336 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1294 PK_Tyr_Ser-Thr 7.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1294 - - gmx:100792724 1238.79