Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1293 ATGAAGTCTTTTTCTTTCTTGTCACCTACACTTTTATACCTTCGTCTGCTTTTTCTGTTTACCTTTAATTTAATATGCTTTGGCCCAAACAAAATTGTGGCAGTGGCTGCAATATTAGGAAACCAAACAGATCATTCTGCATTGCTCAAATTCAAAGAATCAATATCCATTGATCCATATAAAAGTCTTGAATCTTGGAATTCTTCCATTCACTTCTGTAAGTGGCGTGGAATCACATGCAACCCCATGCATCAAAGAGTTATAGGGTTGAACCTAGTAGGATATCACTTACATGGATCTTTATCTCCCTATATTGGTAATCTCACTTTACTGAAAAATCTCAACCTTGGAAACAACAGCTTCTATGGAGAAATCCCACAGGCATTAGGTCAGTTGCTACAATTGCAACTACTTTCTCTCACTGCTAACTCTTTTGTAGGTGAAATTCCTACAAACTTGATGTATTGTTCCAATCTTAAACAGTTATCCTTGTCTGGGAACAATCTCATTGGTAAAATACCAGTTGAAATTGGCTATTTGAAAAAGCTTCAAAGAATGACTGTTTATAAAAACAAATTAACTGGAGGAATCCCTTCATCCATAGGGAATCTTTCATTCATAACGCAGTTAAATTTTGCTCGTAACAACTTAGAAGGAGATATTCCACAAGCAATTTGTCGCCTCAAAAACTTGACATTTTTACATGTGGGTGAGAACAACTTGTCTGGTACCCCTCCTTCTTGTCTTTACAACCTCACATCACTTACTATATTTTACATGCCATTGAATATCTTTCATGGCCCTCTTCCACTCAACATGTTTCACACTCTCCCATATATCCAAATGTTTGGTATTTCCGGAAATCAATTTTCAGGTCCAATCCCCACTTCTATAAATGCAACTTCTTCCATTATTTTACTTGATATCTCTGACAATAATTTTGTTGGACAAGTTCCAAGTCTAGGAAAGCTAAAAGATTTATACTATCTAAATTTGGAACTCAACTATTTAGGTAACAATTCAACTAAGGATTTAGAGTTTTTAAAACCTTTGACAAACTGTACCAAATTGTATCAAGCTTCTTTTTTCGCAAATAACTTCGGAGGCATTCTGCCAAATTCAATAGGCAATTTAACCAATGAGCTTAACATACTATATCTAGGGGGTAATATGATATCAGGAAGAATTCCTGCTGAATTAGGTCGTCTAGTTAACTTAATATCACTGTCCTTGGAATCTAACCAATTTGAAGGAATTATTCCAACTACTTTTGGAAAGTTTCAAAAATTGCAAGTGTTAAATTTAAACATAAACAAGTTGTCAGGAGATATACCACACTCTATAGGTAATCTAAGTCAATTGTATTCTTTGGATTTACATCTTAATATGTTTCACGGAAATATTCCTTCAAACATAGGAAACTGTCAAAAATTACAATATCTAGATCTTTCGCAGAATAAGCTTAGAGGAACCATACCTCTAGAGGTTTTTTATCTTTTTTCTTTAACAAACCCCTTGGACTTGTCACATAACTATTTGAGTGGTAGCTTACCAAGAGAAGTGGGTATGCTAAAAAATATAGAAAGGCTAGATGTCTCTGAGAATTATTTGTCTGGGAATATTCCTGAAACTATTGGTGAATGCATAAGCTTAGAGTACCTCAATTTACAAGGAAACTCCTTCAATGGAACAATACCATCCTCTTTGGCTTCTCACAAAGGTATGCGACATTTAGACTTTTCAAGAAATCAATTATACGGACCAATTCCTGACGCTATGCAAAACATCTCAAGCTTAGAATACTTGAATGTTTCTTTCAACATGTTGGAAGGTAAGGTGCCAACATATGGTGTATTTGGAAATGCAACACAGGTAGCAATTATTGGAAACAATAAGCTCTGCGGAGGTATTGCACAACTGCATCTACCACCATGCCATATCAAGGGCATAAAACACACAAAACACCATAAATTCAGGTTGATAATAGTGATAGTTAGTGTGATTTCTTTCCTTCTCATCATTTCATTTATTATAACTATCTATTGGATGAGAAAAAGAAATAAAAAACGATCTTTTGATTCACCACCAATCGATCAACTAACAAAGGTTTCATATCAAGCCTTACATCGAGGAACCGATGGGTTCTCGACTAGAAACTTGATAGGCTCAGGAAGTTTTGGTTCTGTGTACAGAGGAAATCTTGTGTCAGAAGATAATTTTGTTGCTGTAAAAGTCTTGAACCTACAAAAACAGGGAGCTCACAAGAGTTTTATTGTTGAATGTAATGCACTCAAAAATATTAGGCACCGAAATTTAGTTAAGATCATAACATGTTGTTCGAGTACAGACTACAAAGGCCAAGAATTTAAAGCTTTAGTTTTTGATTACATGAAAAACGGAAGCTTAGAACAATGGTTGCATCCTGAGATTCTAAATGCAGAGCCTCCAACAACCTTGGACCTCAGTCATAGATTAAACATCATTATCGATGTTGCTTCTGCATTACATTATCTTCATATAGAATGTGAGCAATTGGTCCTTCATTGTGATCTAAAGCCAAGCAATGTTCTTCTTGATAATGATATGGTTGCTCATGTGAGTGATTTTGGCATATCAAAACTCATCTTAACCTTTGGCGGTACCTCACAAAAAGATACCAGTACAATTGGAATAAAGGGAACTGTTGGCTATGCTCCTCCGGAGTATGGAATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATTTTAATGTTGGAAATGCTTACTGGTAGAAGACCCACCGACGAAACTTTGGAAGATGGTCAAAATCTGCATAACTTTGTTCAGATTTCATTTCCTGATAATCTTATTAAGATTTTAGACCCACATATTGTATCAAGAGATGCTGGAGTTTCAATACAAGATGGGAACAGTGAGAATCTTATTCCAAGGGTAGAGCAGTGCTTAGTTTCGCTTTTTAAGATTGGACTTGTTTGTTCAATGGAGTCACCAAAAGAAAGAATGAATATTGTGGAAGTCAATAGAGAACTTATCATAATTAAAAAGGCCTTTCTTGCCGGTGTTCGCGCGCTTCACTAG 3090 0.3566 MKSFSFLSPTLLYLRLLFLFTFNLICFGPNKIVAVAAILGNQTDHSALLKFKESISIDPYKSLESWNSSIHFCKWRGITCNPMHQRVIGLNLVGYHLHGSLSPYIGNLTLLKNLNLGNNSFYGEIPQALGQLLQLQLLSLTANSFVGEIPTNLMYCSNLKQLSLSGNNLIGKIPVEIGYLKKLQRMTVYKNKLTGGIPSSIGNLSFITQLNFARNNLEGDIPQAICRLKNLTFLHVGENNLSGTPPSCLYNLTSLTIFYMPLNIFHGPLPLNMFHTLPYIQMFGISGNQFSGPIPTSINATSSIILLDISDNNFVGQVPSLGKLKDLYYLNLELNYLGNNSTKDLEFLKPLTNCTKLYQASFFANNFGGILPNSIGNLTNELNILYLGGNMISGRIPAELGRLVNLISLSLESNQFEGIIPTTFGKFQKLQVLNLNINKLSGDIPHSIGNLSQLYSLDLHLNMFHGNIPSNIGNCQKLQYLDLSQNKLRGTIPLEVFYLFSLTNPLDLSHNYLSGSLPREVGMLKNIERLDVSENYLSGNIPETIGECISLEYLNLQGNSFNGTIPSSLASHKGMRHLDFSRNQLYGPIPDAMQNISSLEYLNVSFNMLEGKVPTYGVFGNATQVAIIGNNKLCGGIAQLHLPPCHIKGIKHTKHHKFRLIIVIVSVISFLLIISFIITIYWMRKRNKKRSFDSPPIDQLTKVSYQALHRGTDGFSTRNLIGSGSFGSVYRGNLVSEDNFVAVKVLNLQKQGAHKSFIVECNALKNIRHRNLVKIITCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPEILNAEPPTTLDLSHRLNIIIDVASALHYLHIECEQLVLHCDLKPSNVLLDNDMVAHVSDFGISKLILTFGGTSQKDTSTIGIKGTVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDETLEDGQNLHNFVQISFPDNLIKILDPHIVSRDAGVSIQDGNSENLIPRVEQCLVSLFKIGLVCSMESPKERMNIVEVNRELIIIKKAFLAGVRALH* 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1293 1029 Gene3D Phosphorylase Kinase; domain 1 697 796 - -
Tpr2g1293 1029 ProSiteProfiles Protein kinase domain profile. 715 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1293 1029 SMART LRR_typ_2 403 426 IPR003591 -
Tpr2g1293 1029 SMART LRR_typ_2 524 548 IPR003591 -
Tpr2g1293 1029 SMART LRR_typ_2 451 475 IPR003591 -
Tpr2g1293 1029 SMART LRR_typ_2 108 132 IPR003591 -
Tpr2g1293 1029 SMART LRR_typ_2 476 499 IPR003591 -
Tpr2g1293 1029 SMART LRR_typ_2 228 251 IPR003591 -
Tpr2g1293 1029 Gene3D Ribonuclease Inhibitor 342 646 IPR032675 -
Tpr2g1293 1029 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Tpr2g1293 1029 Gene3D Transferase(Phosphotransferase) domain 1 797 1022 - -
Tpr2g1293 1029 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Tpr2g1293 1029 PANTHER OS04G0122200 PROTEIN 29 1024 - -
Tpr2g1293 1029 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Tpr2g1293 1029 Pfam Leucine rich repeat 405 462 IPR001611 GO:0005515
Tpr2g1293 1029 Gene3D Ribonuclease Inhibitor 101 341 IPR032675 -
Tpr2g1293 1029 Gene3D Ribonuclease Inhibitor 37 100 IPR032675 -
Tpr2g1293 1029 PANTHER LRR RECEPTOR-LIKE KINASE 29 1024 - -
Tpr2g1293 1029 Pfam Protein kinase domain 717 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1293 1029 SUPERFAMILY L domain-like 349 635 - -
Tpr2g1293 1029 SUPERFAMILY L domain-like 42 337 - -
Tpr2g1293 1029 SUPERFAMILY Protein kinase-like (PK-like) 690 1016 IPR011009 -
Tpr2g1293 1029 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Tpr2g1293 1029 SMART serkin_6 715 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1293 Tpr-Chr2 15126517 15130165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1293 41 1027 Receptor kinase-like Gene Family AT3G47570 45.090 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1293 Pkinase 1.8e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1293 - - mtr:MTR_5g025930 1325.07