Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1290 ATGAAGTCTTTTTCTTTGTTGTCACCTACACTTTTATACCTTCATCTTCTTTTGCTGTTTACCTTCAATTTAATGTGGTTTGACACTAATAACAAAACTGTGGCAGTGGCTGCAATATTAGGAAACCAAACAGATCATTTTGCATTGCTCAAAATCAAAGAGTTAATATCCAGTGATCCATATAAAACTCTTGAATCTTGGAATTCTTCCATCCACTTCTGTAAGTGGCATGGAATCACATGCAACCACATGCATCAAAGAGTTATAGGATTGAACCAAGGAGGATATCAGGTACATGGATCTTTATCTCCCTATATTGGTAATCTCACTTTTTTGAAAAATCTCACCCTTCAAAACAACAGCTTCTATGGAGAAATCCCACAAGAGTTGGGTCAGTTGCTACAATTGCAAAAACTTCATATCTCCAATAACTCTTTTGTAGGTAAAATTCCTACAAACTTGACATATTGCTCCAATCTTAAAGAGTTATACTTGTCTAGGAACAATCTCATTGGTAAAATACCAATTGAAATTGCCTCTTTGAAAAATCTTCAAAGAATGACTGTTTCTAATAACAAATTAACCGGAGGAATCCCATCATTCATAGGGAATCTTTCATTCATAACACACCTTAGTTTTGGTCGTAACAACTTTGAAGGAGATATTCCACAAGCAATTTGTCGCCTAAAAACTTTGACAATTTTACATGTTGGTGAGAACAATTTGTCAGGTACCCCTCCTTTTTGTGTTTACAACATCACATCACTTACTATATTTTACATGGCATTTAATAACTTTCATGGCCCTCTTCCACCCAACATGTTTCACAACCTCCCAAATATCCAAGAGTTTGGCATTTCAGGAAATCAATTTTCAGGTCCAATCCCCACTTCTATAAATGCATCTTCTTCCATTAATTATCTTGATATCTCTAACAATAATTTTGTTGGACAAGTTCCAAGTCTAGGAAAGCTAAAAGATTTATACCATCTAAATTTGGAACTCAACAATTTAGGTAACAATTCAGCTAAGGATTTAGAGTTTCTAAAATCTTTGACAAACTGTAGTAAATTGAATGTGGTTTCTATTTACCATAATTATTTTGGTGGCATTCTTCCAAATTCTATAGGGAATTTATCTACTGAGCTTAATTTACTATATCTTGATGCTAATATGATATCAGGAAAAATTCCTGCTGAACTAGGACGTCTAGTTGGCTTAATATCATTGTCCTTAGAATCTAATCAGTTTGAAGGAATTTTTCCAACTACTTTTGAAAAGTTTCAAAGCTTGCAAATGTTACGTTTGAGTATAAACAAGTTGTCAGGAAATATACCACACTTTATATGCAATCTCAGTCAATTGTATTTTTTGGATTTATATTATAATATGTTTCACGGAAATATTCCTTCAAGCATAGGAAACTGTCAAAAGTTACAATTTCTAGATCTTTCGCAGAATAAGCTTAGAGGAACCGTACCTTTAGAGGTTTTTAATCTTTTTTCTTTATCAACTCGCCTAGACTTGTCGGGTAACTCTTTGAGTGGTAGCTTACCAAGAGAAGTGGGTATGCTAAAACATGTTTTTTGGCTAGATGTCTCTGAGAACCATTTGTCTGGGGATATTCCTGAAACTATTGGTGAATGCATAAGCTTAGAACACCTCAGCTTACAAGGGAACTACTTCAACGGAACCATACCATCCTCTTTAGTATCTCTCAAAGGTCTTATATATTTAGACCTTTCCAGAAATAAATTGTACGGACCAATTCCTGATGTTATGCAAAATATCTCTAGCTTAGAATACTTGAATGTTTCTTTCAACATGTTGGAAGGTGAGGTCCCGACAAACGGTGTGTTTGGAAATGCAACCCAAGTAGCAATTATTGGAAACAATAAGCTTTGTGGAGGTATTGCACAACTGCATCTACCACCATGCGATATCAAGCGTCAAAAACACACAAAACACCATAAATTCAAGTTGATAACACTGATAATTAGTGTGGTTTCTTTTCTTCTCGTTCTTTCATTTATTATAACAATCTACTGGATAAGGAAAATAAATCGAAAACGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGATTTCATACCATGACTTACATCGAGGAACTGATGGGTTCTCGCCTACAAACTTGATCGGATCAGGAAGTTTTGGTTCTGTGTACAAAGCAAATCTTGTGTCAGAAGATCATGTTGTTGCCGTAAAGGTCTTGAACCTGCAAAAGAAGGGAGCTCACAAGAGTTTCATCATTGAATGTAATGCACTCAAGAATGTTAGACACCGAAATTTAGTTAAGATTTTAACATGTTGCTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCTTTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCAAGGGAAGAAAATGGTGAGCATCCAAGAACATTGGATCTTAATCAAAGATTGAATACAATTATTGATGTTGCTTCTGCATTACACTATCTTCATCATGAATGTGAGCAATTGATCCTTCATTGTGATCTAAAGCCAAGCAATGTCCTTATTGATAATGACATGGTTTCTCATGTGAGTGATTTTGGCATATCAAGACTCATCTCAGCCATTGACGGAACCTCTCAAATGGATAACAGTACAATTGAAATAAAAGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCTTGGTACTAGAAATGCTTACCGGTAGAAGACCTATTGATGAAACATTTGAAGATGGTCAAAATCTGCACAACTTTGTTTCAATTTCGTTTCCTGATAATCTTATAAAGGTTTTGGACCCACATCTTGTATCAGGAGATGCAAAAGTAGTAATAGAAGATGGAAACAGTGAAAATCTTATTACAAGCGTAGAGGAGTGGTTAGTTTCACTTTTTAAGATTGGACTTGTTTGTTCGATGGAATCACCGAAAGAAAGATTGAATATTGTGGATGTTAATAGAGAGCTTAGCATAATCAAAAAGGCCTTTCTTGCTGGTCCTCACACTCAAACTAAATTTCTAAGGTCATCCGTGGAAAAAGAAGTGTACTCAGCATGA 3135 0.3522 MKSFSLLSPTLLYLHLLLLFTFNLMWFDTNNKTVAVAAILGNQTDHFALLKIKELISSDPYKTLESWNSSIHFCKWHGITCNHMHQRVIGLNQGGYQVHGSLSPYIGNLTFLKNLTLQNNSFYGEIPQELGQLLQLQKLHISNNSFVGKIPTNLTYCSNLKELYLSRNNLIGKIPIEIASLKNLQRMTVSNNKLTGGIPSFIGNLSFITHLSFGRNNFEGDIPQAICRLKTLTILHVGENNLSGTPPFCVYNITSLTIFYMAFNNFHGPLPPNMFHNLPNIQEFGISGNQFSGPIPTSINASSSINYLDISNNNFVGQVPSLGKLKDLYHLNLELNNLGNNSAKDLEFLKSLTNCSKLNVVSIYHNYFGGILPNSIGNLSTELNLLYLDANMISGKIPAELGRLVGLISLSLESNQFEGIFPTTFEKFQSLQMLRLSINKLSGNIPHFICNLSQLYFLDLYYNMFHGNIPSSIGNCQKLQFLDLSQNKLRGTVPLEVFNLFSLSTRLDLSGNSLSGSLPREVGMLKHVFWLDVSENHLSGDIPETIGECISLEHLSLQGNYFNGTIPSSLVSLKGLIYLDLSRNKLYGPIPDVMQNISSLEYLNVSFNMLEGEVPTNGVFGNATQVAIIGNNKLCGGIAQLHLPPCDIKRQKHTKHHKFKLITLIISVVSFLLVLSFIITIYWIRKINRKRSFDSPTIDQLAKISYHDLHRGTDGFSPTNLIGSGSFGSVYKANLVSEDHVVAVKVLNLQKKGAHKSFIIECNALKNVRHRNLVKILTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPREENGEHPRTLDLNQRLNTIIDVASALHYLHHECEQLILHCDLKPSNVLIDNDMVSHVSDFGISRLISAIDGTSQMDNSTIEIKGTVGYAPPEYGMGSEVSTCGDMYSFGILVLEMLTGRRPIDETFEDGQNLHNFVSISFPDNLIKVLDPHLVSGDAKVVIEDGNSENLITSVEEWLVSLFKIGLVCSMESPKERLNIVDVNRELSIIKKAFLAGPHTQTKFLRSSVEKEVYSA* 1045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1290 1044 Gene3D Ribonuclease Inhibitor 42 326 IPR032675 -
Tpr2g1290 1044 Gene3D Transferase(Phosphotransferase) domain 1 798 1031 - -
Tpr2g1290 1044 SMART serkin_6 716 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1290 1044 SUPERFAMILY Protein kinase-like (PK-like) 695 1015 IPR011009 -
Tpr2g1290 1044 SUPERFAMILY L domain-like 43 338 - -
Tpr2g1290 1044 ProSiteProfiles Protein kinase domain profile. 716 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1290 1044 Gene3D Phosphorylase Kinase; domain 1 697 797 - -
Tpr2g1290 1044 Pfam Protein kinase domain 719 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1290 1044 SMART LRR_typ_2 229 252 IPR003591 -
Tpr2g1290 1044 SMART LRR_typ_2 253 277 IPR003591 -
Tpr2g1290 1044 SMART LRR_typ_2 404 427 IPR003591 -
Tpr2g1290 1044 SMART LRR_typ_2 181 205 IPR003591 -
Tpr2g1290 1044 SMART LRR_typ_2 109 133 IPR003591 -
Tpr2g1290 1044 SMART LRR_typ_2 500 525 IPR003591 -
Tpr2g1290 1044 SMART LRR_typ_2 452 476 IPR003591 -
Tpr2g1290 1044 SMART LRR_typ_2 597 622 IPR003591 -
Tpr2g1290 1044 Pfam Leucine rich repeat N-terminal domain 44 82 IPR013210 -
Tpr2g1290 1044 Pfam Leucine rich repeat 407 464 IPR001611 GO:0005515
Tpr2g1290 1044 Pfam Leucine rich repeat 135 194 IPR001611 GO:0005515
Tpr2g1290 1044 Pfam Leucine rich repeat 231 291 IPR001611 GO:0005515
Tpr2g1290 1044 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Tpr2g1290 1044 PANTHER OS04G0122200 PROTEIN 30 1025 - -
Tpr2g1290 1044 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Tpr2g1290 1044 PANTHER LRR RECEPTOR-LIKE KINASE 30 1025 - -
Tpr2g1290 1044 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Tpr2g1290 1044 Gene3D Ribonuclease Inhibitor 337 655 IPR032675 -
Tpr2g1290 1044 PRINTS Leucine-rich repeat signature 479 492 - -
Tpr2g1290 1044 PRINTS Leucine-rich repeat signature 573 586 - -
Tpr2g1290 1044 SUPERFAMILY L domain-like 383 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1290 Tpr-Chr2 15089696 15093655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1290 42 1031 Receptor kinase-like Gene Family AT3G47570 44.555 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1290 Pkinase 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1290 - - mtr:MTR_5g025930 1309.28