Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1288 ATGAAGTCTTTTTCTTTGTTGTCACCTACACTTTTATACCTTCATCTTCTTTTGCTGTTTACCTTCAATTTAATGTGGTTTGACACTAATAACAAAACTGTGGCAGTGGCTGCAATATTAGGAAACCAAACAGATCATTTTGCATTGCTCAAATTCAAACAATCAATATCCAGTGATCCATATAAAACTCTTGAATCTTGGAATTCTTCCATCCACTTCTGTAAGTGGCGTGGAATCACATGCAACCCCATGCATCAAAGAGTTATAGGATTGAACCTCAAAGGACATCAGTTACATGGATCTCTATCTCCACATGTTGGTAATCTCACTTTACTGAAAAATCTCAATCTTGGAAACAACAGCTTCCATGGAGAAATCCCAAAGGAGTTAGGTAAGTTGCTACAATTGCAACAACTTTATCTCACCAATAACTCTTTTGTAGGTGAAATTCCTACAAACTTGACAAATTGCTCCAATCTCGAAGACTTAATCTTGGATGGGAACAAACTGGTTGGCAAAATACCAATTGAAATTGGCTCTTTGAAAAAGCTTCAAGTAATGTCTGTTTATAAAAACAAATTAACTGGTGGAATCCCTTCATCCATAGGGAATCTTTCATTTGTAATGCTGTTAGATTTTATTCGTAACAACTTAGAAGGAGATATTCCACAAGCTATTTGTCGCCTCAAAAACTTGACAGTTTTAGGTCTGGGTGAGAACAATTTGTCTGGAACCCCTCCAACATGTCTTTACAACATCACATCACTTACTATATTTTACATGCCAATAAATAACTTTCATGGCCCTCTTCCACCCAACATGTTTCACACTCTCCCAAATATCAAACAGTTTGGTATTGCAGGAAATCAATTTTCAGGTCCAATCCCCACTTCTATAAATGCATCTTCTTCCATTAGTTATCTTGAAATGGCTGACAATAATTTTGTTGGACAAGTTCCAAGTCTAGGAAAGCTAAAAGATTTATACCTTCTGAATTTGGAACTCAACAATTTAGGTAACAATTCCGCTGAGGATTTAGAGTTTTTAAAACCTTTGACAAACTGTAGTAAATTGTATTTAGCTTCTTTTGATCAAAATAACTTCGGAGGCGTTCTGCCAAATTCTATAGGCAATTTAACCAATGAGCTTAAAATGCTATATCTTGGGGGTAATATGATATCAGGAAAAATTCCTGCTGAATTAGGTCGTCTAGTTGGCTTATTGTCATTGTCCTTGGAATCTAACCACTTTGAAGGAGTTATTCCAACTACTTTTGGAAAGTTTCAAAACTTGCAAATGTTAAGTTTCAGCGGAAACAAGTTGTCAGGAGATATACCACACTTTGTAGGTAATCTCAGCCAATTGTATCATTTGGATTTAGATCATAATAAGTTTGAGGGAAATATTCCTCCAAGCATAGGAAAGTGTCAACAGTTACAAATCCTAGATCTTTCACATAATAAGCTTAGAGGAACCATACCTTTAGAGGTTTTTAATCTTATTTCTTTAACAAACCTCTTGGACTTGTCACATAACTCTTTGAGTGGTAACTTACCAAAAGAAGTGGGTATGCTAAAAAATATAGATTGGCTAGATGTTTCTGAAAATCATTTGTCTGGGAATATTCCTGAAACTATTGGTGAATGCATAAGCTTAGAGCACCTCAGCTTACAAGGAAACTCCATCAATGGAACAATACCATCCTCTTTCGCTTCTCTAAAAGGTCTTAGATATTTAGATCTTTCAAGAAATCGATTGTCTGGATCAATTCCTGATGTTATGCAAAATATCTCTGTTTTAGAATATTTGAATGTATCTTTTAACATGTTGGATGGTGAGGTACCAACCAATGGTGTCTTTGGAAATGCAACCCAAGTAGAAATGATTGGAAACAATAATCTTTGTGGTGGTATCTCACAGCTGCATCTACCACCATGCCCTATCAAGGGCAGAAAACACACAAAACACCATAAATTCAGGTTGATAGCAGTGATAGTTAGTGTGGTTTCTTTTCTTCTCATACTTTCATTTATTATAACTATGTACTGGATGAAGAAAAGAAATCAAAAGCGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGGTTTCATACCAAGAATTGCATCAAGGAACCAATGGGTTCTCTCCTACAAACTTCATCGGATCAGGAAGTTTTGGTTCTGTGTACAAAGCAAATCTTGTGTCGGAAGATCATATTGTTGCTGTAAAGGTCCTGAACCTCGAAAAAAAGGGAGCTCACAAGAGTTTCATTGTTGAATGTAATGCACTCAAAAATATTAGACACCGAAATTTAGTTAAGATTTTAACTTGTTGTTCTAGTACAGATTACAAAGGTCAAGAATTCAAAGCTCTGGTTTTCGATTACATGAAAAATGGAAATTTAGAACAATGGTTGCATCCTGAGATTTTAAATGAAGAGCATCCAAGAACATTGAGCCTTGGTCAAAGATTAAACATAATTATTGATGTTGCTGATGCATTACATTATCTTCACCAAGAATGTGAGCAATTGGTCCTTCATTGCGATCTAAAGCCAAACAACGTCCTTCTTGATGATGACATGGTTGCTCATGTGAGTGATTTTGGAATAGCAAGACTTGTCTTAGCCATTGGCGGCAGCTCTCGGAAGGATACTAGCACAATTGGAATAAAAGGGACAGTTGGTTATGCTCCTCCAGAGTACGGAATGCGTTTTGAAGTTTCCACATGTGGTGACATGTATAGCTTTGGAATTCTGGTGTTGGAAATGCTTACCGGTAGAAGACCTACTGATGAAGTTTTTGAAGATGGTCAAAATCTGCATAATTTTGTTGCAATTTCATTTCCTGATAACCTTATGAAGATTTTAGATCCACATATTGTATCAAGAGATGTAGAAGTAGCAATACAAGATGGAAATCGTGAAAATCTTATTCCAACTATTGAAGAGTGCTTAGTTTCACTTTTTAGGATTGGAATTATTTGTTCGATGGAATCACCGAAAGAAAGAATGAATATTGCAGATGTCACAGGAGAGCTTAGCAAAATCAAAAAGGCCTTTTTCACCGGTGTTCACGCTCATAATTAG 3093 0.3595 MKSFSLLSPTLLYLHLLLLFTFNLMWFDTNNKTVAVAAILGNQTDHFALLKFKQSISSDPYKTLESWNSSIHFCKWRGITCNPMHQRVIGLNLKGHQLHGSLSPHVGNLTLLKNLNLGNNSFHGEIPKELGKLLQLQQLYLTNNSFVGEIPTNLTNCSNLEDLILDGNKLVGKIPIEIGSLKKLQVMSVYKNKLTGGIPSSIGNLSFVMLLDFIRNNLEGDIPQAICRLKNLTVLGLGENNLSGTPPTCLYNITSLTIFYMPINNFHGPLPPNMFHTLPNIKQFGIAGNQFSGPIPTSINASSSISYLEMADNNFVGQVPSLGKLKDLYLLNLELNNLGNNSAEDLEFLKPLTNCSKLYLASFDQNNFGGVLPNSIGNLTNELKMLYLGGNMISGKIPAELGRLVGLLSLSLESNHFEGVIPTTFGKFQNLQMLSFSGNKLSGDIPHFVGNLSQLYHLDLDHNKFEGNIPPSIGKCQQLQILDLSHNKLRGTIPLEVFNLISLTNLLDLSHNSLSGNLPKEVGMLKNIDWLDVSENHLSGNIPETIGECISLEHLSLQGNSINGTIPSSFASLKGLRYLDLSRNRLSGSIPDVMQNISVLEYLNVSFNMLDGEVPTNGVFGNATQVEMIGNNNLCGGISQLHLPPCPIKGRKHTKHHKFRLIAVIVSVVSFLLILSFIITMYWMKKRNQKRSFDSPTIDQLAKVSYQELHQGTNGFSPTNFIGSGSFGSVYKANLVSEDHIVAVKVLNLEKKGAHKSFIVECNALKNIRHRNLVKILTCCSSTDYKGQEFKALVFDYMKNGNLEQWLHPEILNEEHPRTLSLGQRLNIIIDVADALHYLHQECEQLVLHCDLKPNNVLLDDDMVAHVSDFGIARLVLAIGGSSRKDTSTIGIKGTVGYAPPEYGMRFEVSTCGDMYSFGILVLEMLTGRRPTDEVFEDGQNLHNFVAISFPDNLMKILDPHIVSRDVEVAIQDGNRENLIPTIEECLVSLFRIGIICSMESPKERMNIADVTGELSKIKKAFFTGVHAHN* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1288 1030 PANTHER LRR RECEPTOR-LIKE KINASE 30 1024 - -
Tpr2g1288 1030 PRINTS Leucine-rich repeat signature 479 492 - -
Tpr2g1288 1030 PRINTS Leucine-rich repeat signature 573 586 - -
Tpr2g1288 1030 SMART LRR_sd22_2 428 454 - -
Tpr2g1288 1030 SMART LRR_sd22_2 573 599 - -
Tpr2g1288 1030 SMART LRR_sd22_2 476 497 - -
Tpr2g1288 1030 SMART LRR_sd22_2 181 207 - -
Tpr2g1288 1030 SMART LRR_sd22_2 229 255 - -
Tpr2g1288 1030 Pfam Leucine rich repeat N-terminal domain 44 82 IPR013210 -
Tpr2g1288 1030 SMART serkin_6 716 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1288 1030 SUPERFAMILY L domain-like 350 636 - -
Tpr2g1288 1030 ProSiteProfiles Protein kinase domain profile. 716 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1288 1030 PANTHER OS04G0122200 PROTEIN 30 1024 - -
Tpr2g1288 1030 SUPERFAMILY L domain-like 43 338 - -
Tpr2g1288 1030 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Tpr2g1288 1030 Pfam Protein kinase domain 720 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1288 1030 SMART LRR_typ_2 477 500 IPR003591 -
Tpr2g1288 1030 SMART LRR_typ_2 525 549 IPR003591 -
Tpr2g1288 1030 SMART LRR_typ_2 109 133 IPR003591 -
Tpr2g1288 1030 SMART LRR_typ_2 573 596 IPR003591 -
Tpr2g1288 1030 SMART LRR_typ_2 229 252 IPR003591 -
Tpr2g1288 1030 SMART LRR_typ_2 404 427 IPR003591 -
Tpr2g1288 1030 SMART LRR_typ_2 452 476 IPR003591 -
Tpr2g1288 1030 Gene3D Ribonuclease Inhibitor 104 340 IPR032675 -
Tpr2g1288 1030 Gene3D Ribonuclease Inhibitor 38 103 IPR032675 -
Tpr2g1288 1030 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Tpr2g1288 1030 Pfam Leucine rich repeat 407 465 IPR001611 GO:0005515
Tpr2g1288 1030 SUPERFAMILY Protein kinase-like (PK-like) 691 1013 IPR011009 -
Tpr2g1288 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Tpr2g1288 1030 Gene3D Transferase(Phosphotransferase) domain 1 798 1025 - -
Tpr2g1288 1030 Gene3D Phosphorylase Kinase; domain 1 678 797 - -
Tpr2g1288 1030 Gene3D Ribonuclease Inhibitor 341 647 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1288 Tpr-Chr2 15064404 15069206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1288 42 1023 Receptor kinase-like Gene Family AT3G47570 45.619 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1288 Pkinase 3.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1288 - - mtr:MTR_5g025930 1345.1