Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1287 ATGAAGTCTTTTTCTTTCTTGTCAGTGTCACCTACACTTTTATACCTTCATCTGCTTTTTCTGTTTACCTTAACAGATCATTTTGTGGCAGTGCCTGCAATATTAGGAAACCAAACAGATCATTTGGCATTGCTCAAATTCAAAGAATCAATATCCAGTGATCCCTATAAAAGTCTTGAATCTTGGAATTCTTCCATCCACTTCTGTAAGTGGCGTGGAATCACATGCAATCCCATGCACCAAAGAGTTATAGGATTGAACCTAGGAGGATATCAGGTACATGGATCTTTATCTCCCTATATTGGTAATCTCACTTTTTTGAAAAATCTCACCCTTCAAAACAACAGCTTCCATGGAGAAATCCCACAAGAGTTGGGTCAGTTGCTACAATTGCAAAAACTTCATATCTCCAATAACTCTTTTGTAGGTAAAATTCCTACAAACTTGACATATTGCTCCAATCTTAAAGAGTTATACTTGTCTAGGAACAATCTCATTGGTAAAATACCAATTGAAATTGCCTCTTTGAAAAATCTTCAAAGAATGACTGTTTCTAATAACAAATTAACCGGAGGAATCCCATCATTCATAGGGAATCTTTCATTCATAACACACCTTAGTTTTGGTCGTAACAACTTTGAAGGAGATATTCCACAAGCAATTTGTCGCCTAAAAACTTTGACAATTTTACATGTTGGTGAGAACAATTTGTCAGGTACCCCTCCTTTTTGTGTTTACAACATCACATCACTTACTATATTTTACATGGCATTTAATAACTTTCATGGCTCTCTTCCACCCAACATGTTTCACAACCTCCCAAATATCCAAGAGTTTGGCATTTCAGGAAATCAATTTTCAGGTCCAATCCCCACTTCTATAAATGCATCTTCTTCCATTAATTATCTTGATATCTCTGACAATAATTTTGTTGGACAAGTTCCAAGTCTAGGAAAGCTCAAAGATTTATACCATCTAAATTTGGAACTCAACAATTTAGGTAACAATTCAGCTAAGGATTTAGAGTTTTTAAAATCTTTGACAAACTGTACTAAATTGAATGTGGTTTCTATTTACCATAATTATTTTGGTGGCATTCTTCCAAATTCTATAGGGAATTTATCTACTGAGCTTAATTTACTATATCTTGATGCTAATATGATATCAGGAAAAATTCCTGCTGAACTAGGACGTCTAGTTGGCTTAATATCATTGTCCTTAGAATCTAATCAGTTTGAAGGAATTATTCCAACTACTTTTGAAAAGTTTCAAAACTTGCAAATGTTACGTTTGAGTATAAACAAGTTGTCAGGAAATATACCACACTTTATATGTAATCTCAGTCAATTGTATTTTTTGGATTTATATTATAATATGTTTCACGGAAATATTCCTTCAAGCATAGGAAACTGTCAAAAGTTACAATTTCTAGATCTTTCGCAGAATAAGCTTAGAGGAACCGTACCTTTAGAGGTTTTTAATCTTTTTTCTTTATCAACTCGCCTAGACTTGTCGGGTAACTCTTTGAGTGGTAGCTTACCAAGAGAAGTGGGTATGCTAAAACATGTTTTTTGGCTAGATGTCTCTGAGAACCATTTGTCTGGGGATATTCCTGAAACTATTGGTGAATGCATAAGCTTAGAACACCTCAGCTTACAAGGGAACTACTTCAACGGAACCATACCATCCTCTTTTGTATCTCTCAAAGGTCTTAGATATTTAGACCTTTCCAGAAATAAATTGTACGGACCAATTCCTGATGTTATGCAAAATATCTCTAGCTTAGAATACTTGAATGTTTCTTTCAACATGTTGGAAGGTGAGGTCCCGACAAACGGTGTCTTTGGAAATGCAACCCAAGTAGCAATTATTGGAAACAATAAGCTTTGTGGAGGTATTGCACAACTGCATCTACCACCATGCGATATCAAGCGTCGAAAACACACAAAACACCATAAATTCAAGTTGATAACACTGATAATTTGTGTGGTTTCTTTTCTTCTCGTTCTTTCATTTATTATAACAATCTACTGGATAAGGAAAATAAATCGAAAACGATCTTTTGATTCACCAACAATTGATCAACTAGCTAAGATTTCATACCATGACTTACATCGAGGAACCGATGGGTTCTCGCCTACAAACTTGATCGGATCAGGAAGTTTTGGTTCTGTGTACAAAGCAAATCTTGTGTCAGAAGATCATGTTGTTGCCGTAAAGGTCTTGAACCTGCAAAAGAAGGGAGCTCACAAGAGTTTCATCATTGAATGTAATGCACTCAAGAATGTTAGACACCGAAATTTAGTTAAGATTTTAACATGTTGCTCTAGTACAGATTACAAAGGTCAAGAATTTAAAGCTTTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCAAGGGAAGAAAATGGTGAGCATCCAAGAACATTGGATCTTAATCAAAGATTGAATACAATTATTGATGTTGCTTCTGCATTACACTATCTTCATCATGAATGTGAGCAATTGATCCTTCATTGTGATCTAAAGCCAAGCAATGTCCTTATTGATAATGACATGGTTTCTCATGTGAGTGATTTTGGCATATCAAGACTCATCTCAGCCATTGACGGAACCTCTCAAATGGATAACAGTACAATTGAAATAAAAGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCTTGGTACTAGAAATGCTTACCGGTAGAAGACCTATTGATGAAACATTTGAAGATGGTCAAAATCTGCACAACTTTGTTTCAATTTCGTTTCCTGATAATCTTATAAAGGTTTTGGACCCACATCTTGTATCAGGAGATGCAAAAGTAGTAATAGAAGATGGAAACAGTGAAAATCTTATTACAAGCGTAGAGGAGTGGTTAGTTTCACTTTTTAAGATCGGACTTGTTTGTTCGATGGAATCACCGAAAGAAAGATTGAATATTGTGGATGTTAATAGAGAGCTTAGCATAATCAAAAAGGTCTTTCTTGCTGGTCCTCACACTCAAACTAAATTTCTAAGGTCATCCGTGGAAAAAGAAGTGTACTCAGCATGA 3120 0.3548 MKSFSFLSVSPTLLYLHLLFLFTLTDHFVAVPAILGNQTDHLALLKFKESISSDPYKSLESWNSSIHFCKWRGITCNPMHQRVIGLNLGGYQVHGSLSPYIGNLTFLKNLTLQNNSFHGEIPQELGQLLQLQKLHISNNSFVGKIPTNLTYCSNLKELYLSRNNLIGKIPIEIASLKNLQRMTVSNNKLTGGIPSFIGNLSFITHLSFGRNNFEGDIPQAICRLKTLTILHVGENNLSGTPPFCVYNITSLTIFYMAFNNFHGSLPPNMFHNLPNIQEFGISGNQFSGPIPTSINASSSINYLDISDNNFVGQVPSLGKLKDLYHLNLELNNLGNNSAKDLEFLKSLTNCTKLNVVSIYHNYFGGILPNSIGNLSTELNLLYLDANMISGKIPAELGRLVGLISLSLESNQFEGIIPTTFEKFQNLQMLRLSINKLSGNIPHFICNLSQLYFLDLYYNMFHGNIPSSIGNCQKLQFLDLSQNKLRGTVPLEVFNLFSLSTRLDLSGNSLSGSLPREVGMLKHVFWLDVSENHLSGDIPETIGECISLEHLSLQGNYFNGTIPSSFVSLKGLRYLDLSRNKLYGPIPDVMQNISSLEYLNVSFNMLEGEVPTNGVFGNATQVAIIGNNKLCGGIAQLHLPPCDIKRRKHTKHHKFKLITLIICVVSFLLVLSFIITIYWIRKINRKRSFDSPTIDQLAKISYHDLHRGTDGFSPTNLIGSGSFGSVYKANLVSEDHVVAVKVLNLQKKGAHKSFIIECNALKNVRHRNLVKILTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPREENGEHPRTLDLNQRLNTIIDVASALHYLHHECEQLILHCDLKPSNVLIDNDMVSHVSDFGISRLISAIDGTSQMDNSTIEIKGTVGYAPPEYGMGSEVSTCGDMYSFGILVLEMLTGRRPIDETFEDGQNLHNFVSISFPDNLIKVLDPHLVSGDAKVVIEDGNSENLITSVEEWLVSLFKIGLVCSMESPKERLNIVDVNRELSIIKKVFLAGPHTQTKFLRSSVEKEVYSA* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1287 1039 Gene3D Phosphorylase Kinase; domain 1 692 792 - -
Tpr2g1287 1039 Gene3D Transferase(Phosphotransferase) domain 1 793 1022 - -
Tpr2g1287 1039 Pfam Protein kinase domain 714 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1287 1039 Pfam Leucine rich repeat 402 459 IPR001611 GO:0005515
Tpr2g1287 1039 Pfam Leucine rich repeat 546 605 IPR001611 GO:0005515
Tpr2g1287 1039 Pfam Leucine rich repeat 226 286 IPR001611 GO:0005515
Tpr2g1287 1039 Pfam Leucine rich repeat 130 189 IPR001611 GO:0005515
Tpr2g1287 1039 SMART LRR_typ_2 495 520 IPR003591 -
Tpr2g1287 1039 SMART LRR_typ_2 447 471 IPR003591 -
Tpr2g1287 1039 SMART LRR_typ_2 592 617 IPR003591 -
Tpr2g1287 1039 SMART LRR_typ_2 248 272 IPR003591 -
Tpr2g1287 1039 SMART LRR_typ_2 104 128 IPR003591 -
Tpr2g1287 1039 SMART LRR_typ_2 399 422 IPR003591 -
Tpr2g1287 1039 SMART LRR_typ_2 568 591 IPR003591 -
Tpr2g1287 1039 SMART LRR_typ_2 176 200 IPR003591 -
Tpr2g1287 1039 SMART LRR_typ_2 224 247 IPR003591 -
Tpr2g1287 1039 Gene3D Ribonuclease Inhibitor 97 336 IPR032675 -
Tpr2g1287 1039 Gene3D Ribonuclease Inhibitor 33 96 IPR032675 -
Tpr2g1287 1039 Gene3D Ribonuclease Inhibitor 337 650 IPR032675 -
Tpr2g1287 1039 ProSitePatterns Protein kinases ATP-binding region signature. 717 740 IPR017441 GO:0005524
Tpr2g1287 1039 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Tpr2g1287 1039 PANTHER OS04G0122200 PROTEIN 25 1020 - -
Tpr2g1287 1039 ProSiteProfiles Protein kinase domain profile. 711 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1287 1039 SMART serkin_6 711 1018 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1287 1039 PANTHER LRR RECEPTOR-LIKE KINASE 25 1020 - -
Tpr2g1287 1039 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Tpr2g1287 1039 SUPERFAMILY L domain-like 378 631 - -
Tpr2g1287 1039 SUPERFAMILY Protein kinase-like (PK-like) 690 1010 IPR011009 -
Tpr2g1287 1039 SUPERFAMILY L domain-like 38 333 - -
Tpr2g1287 1039 PRINTS Leucine-rich repeat signature 474 487 - -
Tpr2g1287 1039 PRINTS Leucine-rich repeat signature 568 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1287 Tpr-Chr2 15057739 15061668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1287 37 1026 Receptor kinase-like Gene Family AT3G47570 44.755 0.0 837
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1287 Pkinase 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1287 - - mtr:MTR_5g025930 1319.68