Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1286 ATGTTTCCCACATTTTCACTTTTGTTATATTTTCTTTTTACTTTCAAATTCGGAACAAAAACAATTGCATTTACATTAGGAAACCATACTGATCATTTGGCATTGCTCAAATTCAAGGATTCAATATCAAGTGACTCAAATGGAGTCTTAGATTCTTGGAATGGTTCTATCCACTTCTGTAAATGGCATGGAATCACATGCAGTCCTATGCATCAAAGAGTTACTGAGTTGAACTTACCTGGATATAAGTTACATGGATCCTTATCTTCTCATGTTGGCAATCTCACTTTTCTCAGATACATCAACCTTGCAGACAACAAATTCTTTGGAAATATCCCACAAGAGTTAGGTCAGTTGTTACAATTACAAGAACTCTATCTCACCAATAACTCGTTCTCCGGAGAAATTCCCACACGCTTGTCAAATTGTTTCAACCTTAAGGACTTATACTTGAGAGGGAACCATTTGATTGGAAAAATACCAATTGAAATTGGCTCTCTTCAAAAGCTTCAAGAATTTAGTGTTAGGGGAAACAATTTGACCGACGGAGTCCCATCATTCATAGGAAATCTTTCATTCTTAACAATTCTCTCAGTTTCTTATAATAACTTAGAGGGAGATATTCCGCAAGAAATATGTCGCCTAAAAAACTTGAAAATGATATTAGTGTTTGCCAATAAATTGTCTGGTACATTTCCTTCTTGTCTTTACAATATGTCATCTCTTACTACGATCTCAGCTGCACAGAATCAGTTCAATGACTCTCTTCCACCCAACATTTTCAACTCTCTCCCAAATCTTGAAGTGTTTCAAATTGGTGACAATCAAATCTCAGGTCTAATGCCCATTTCTGTTGCAAATGCTTCTACCCTTACAAAACTTGATATCAGTAAAAACTCTTTTCTTGGAAAAATTCCAAATCTTGGAAGGCTAAAAAATCTTTTGAGGCTAAATTTGGAATTAAATAATTTTGGTTACAATTCAACGAAAGATTTAGATTTTTTAAAATCATTGACAAACTGTAGTAAGTTGCAACTAGTTTCTATAGCTTATAATAATTTTGGAGGTCATTTGCCATCTCTCATAGGTAACTTAACTTCCCAATTTAGTCAACTGTATCTTGGGAGTAATCAAATATCTGGGAAAATTCCTTTAGAATTAGGAAATCTATATAGTTTAATTATCTTGGCCATGGAAAACAACCGTTTTGAAGGGATGATACCAGGTTCTTTTGGGAAGTTTCAACAGATGCAAGTGTTAGATTTGAGTGAAAACAAATTGTTAGGACATATACCATCCTTCATAGGCAACCTTAGTAAGATGTATTATTTGAGTTTAGCACATAATATGTTAGAACATAATATTCCCCCAAACTTAGGAAATTGTCAAAGTTTAAATCACCTAAACCTTTCACAAAACAATCTTAAAGGAACCATACCTATAGAGGTTTTAAGTATTTCCGCGTTATCAAACTCTGTGGACTTGTCACAAAACTCATTGAGTGGAAACCTACCTGTTGAAGTGAGTCGGCTAAAAAATATTAATAAGCTAGATGTCTCCGAGAACAATTTGTCTGGTGAAATTCCTATAACCATTGGTCAATGCAAAAAATTAGAATACCTTTATTTGCAAGGAAACTCCTTCGGCAAAATCATACCTTCCTCTTTGGGGTCTCTTAGAGGACTTCGATATTTAGACCTGTCAAGAAATCGATTGTCTGGAACAATTCCTAACGTTCTGCAAAATATTTCTTTAGAACACTTGAATGTTTCATTTAACATGTTGGATGGAGAGGTTCCAAAAGAAGGTGTCTTTGGAAATGCTAGCGCATTAGCGGTGACTGGTAACAATAAGCTTTGTGGAGGTATTTCTCACTTGCACCTTCCTCCATGCCCTGTCGAACATATGAAACTGGCAAAACACCATAATTACCGTTTGATAGCAGTGATAGTTAGTGTGGTTGTTTTTCTTCTCGCAATTCTACTTATTGTATCTATCTACTTGATGAGGAAAAGAACCAAGAAACCATTTTCAAATTCACCAACAACTGACCAACTAGCTATGGTTTCTTACCAAGACTTATATCAGGCTACTGATGGGTTCTCGGCTACAAACTTGATTGGATCAGGAGGCTTTGGTTCGGTGTATAAAGGAATTCTTATGTCAGAAGATAAAGTCATTGTTGTAAAGGTCCTGAACCTTGAAAAGAAGGGAGCTCAAAAGAGTTTTATAACCGAATGTAATGCACTCAAAAATATTAGACATCGAAATTTGGTTAAGATTTTAACTTGCTGTTCTAGTATTGATTACAAATGTCAAGAATTCAAAGCTCTAATTTTTGAATACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCTAAGGACAGGAAATGTAGAGCATCCTAGAACATTGGATCTTAATCAAAGATTGAATATCATTATTGATGTTGCTTGTGCATTACATTATCTTCATCATGAATCTGAGCAGTTGGTCCTTCATTGTGATCTAAAGCCAAGCAATGTCCTTATTGATGAAGACATCGTTGCTCATGTGAGTGATTTTGGTATAGCAAGACTTGTCTCATCTGTCGACAGTATCTCTCCTAAGGACACTAGCACAATCGGAATAAAAGGGACCATTGGATATGCTCCTCCAGAGTACGGAATGGGTTCCGAAGTTTCCACTCATGGTGATATGTATAGCTTTGGGATACTTATATTGGAAATGCTTACGCGAAGAAGACCTACAGATGAAATGTTTATAGATGGTCAAAATCTTCGCATGTATGTTGAAATTTCATTTCCTAATGATGTTATGGAGATTTTGGACCCACATATTGTAGCAAGAGATGAAGAAGCAACAATTGAAGATGGAAACAGTTGGAATCTTATTCCAACAATAGAGAAATGCTTAGTTTCACTATTTAGGATTGGACTTGCTTGTTCGATGGACACACCTAAAGCAAGAATGAACATAGCAGATGCAACTAGAGAGCTAAACATAATTAGAAAGACTTTTCTCGCTGGCAAGGTGTTCACCCCCTCACGAGTAATCAAAGCTGAAATAAATTTCGGCAACTAA 3084 0.3567 MFPTFSLLLYFLFTFKFGTKTIAFTLGNHTDHLALLKFKDSISSDSNGVLDSWNGSIHFCKWHGITCSPMHQRVTELNLPGYKLHGSLSSHVGNLTFLRYINLADNKFFGNIPQELGQLLQLQELYLTNNSFSGEIPTRLSNCFNLKDLYLRGNHLIGKIPIEIGSLQKLQEFSVRGNNLTDGVPSFIGNLSFLTILSVSYNNLEGDIPQEICRLKNLKMILVFANKLSGTFPSCLYNMSSLTTISAAQNQFNDSLPPNIFNSLPNLEVFQIGDNQISGLMPISVANASTLTKLDISKNSFLGKIPNLGRLKNLLRLNLELNNFGYNSTKDLDFLKSLTNCSKLQLVSIAYNNFGGHLPSLIGNLTSQFSQLYLGSNQISGKIPLELGNLYSLIILAMENNRFEGMIPGSFGKFQQMQVLDLSENKLLGHIPSFIGNLSKMYYLSLAHNMLEHNIPPNLGNCQSLNHLNLSQNNLKGTIPIEVLSISALSNSVDLSQNSLSGNLPVEVSRLKNINKLDVSENNLSGEIPITIGQCKKLEYLYLQGNSFGKIIPSSLGSLRGLRYLDLSRNRLSGTIPNVLQNISLEHLNVSFNMLDGEVPKEGVFGNASALAVTGNNKLCGGISHLHLPPCPVEHMKLAKHHNYRLIAVIVSVVVFLLAILLIVSIYLMRKRTKKPFSNSPTTDQLAMVSYQDLYQATDGFSATNLIGSGGFGSVYKGILMSEDKVIVVKVLNLEKKGAQKSFITECNALKNIRHRNLVKILTCCSSIDYKCQEFKALIFEYMKNGSLEQWLHLRTGNVEHPRTLDLNQRLNIIIDVACALHYLHHESEQLVLHCDLKPSNVLIDEDIVAHVSDFGIARLVSSVDSISPKDTSTIGIKGTIGYAPPEYGMGSEVSTHGDMYSFGILILEMLTRRRPTDEMFIDGQNLRMYVEISFPNDVMEILDPHIVARDEEATIEDGNSWNLIPTIEKCLVSLFRIGLACSMDTPKARMNIADATRELNIIRKTFLAGKVFTPSRVIKAEINFGN* 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1286 1027 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Tpr2g1286 1027 Gene3D Ribonuclease Inhibitor 326 422 IPR032675 -
Tpr2g1286 1027 SUPERFAMILY L domain-like 370 621 - -
Tpr2g1286 1027 SMART serkin_6 701 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1286 1027 Gene3D Phosphorylase Kinase; domain 1 663 782 - -
Tpr2g1286 1027 ProSiteProfiles Leucine-rich repeat profile. 464 485 IPR001611 GO:0005515
Tpr2g1286 1027 ProSiteProfiles Protein kinase domain profile. 701 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1286 1027 SUPERFAMILY Protein kinase-like (PK-like) 675 1000 IPR011009 -
Tpr2g1286 1027 Pfam Leucine rich repeat 537 595 IPR001611 GO:0005515
Tpr2g1286 1027 Pfam Protein kinase domain 704 923 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1286 1027 Gene3D Ribonuclease Inhibitor 28 310 IPR032675 -
Tpr2g1286 1027 PANTHER OS04G0122200 PROTEIN 18 1010 - -
Tpr2g1286 1027 ProSitePatterns Protein kinases ATP-binding region signature. 707 730 IPR017441 GO:0005524
Tpr2g1286 1027 SUPERFAMILY L domain-like 29 324 - -
Tpr2g1286 1027 Gene3D Transferase(Phosphotransferase) domain 1 783 1011 - -
Tpr2g1286 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Tpr2g1286 1027 PANTHER LRR RECEPTOR-LIKE KINASE 18 1010 - -
Tpr2g1286 1027 Gene3D Ribonuclease Inhibitor 423 639 IPR032675 -
Tpr2g1286 1027 SMART LRR_typ_2 264 287 IPR003591 -
Tpr2g1286 1027 SMART LRR_typ_2 191 215 IPR003591 -
Tpr2g1286 1027 SMART LRR_typ_2 119 143 IPR003591 -
Tpr2g1286 1027 SMART LRR_typ_2 390 413 IPR003591 -
Tpr2g1286 1027 SMART LRR_typ_2 438 462 IPR003591 -
Tpr2g1286 1027 SMART LRR_typ_2 511 535 IPR003591 -
Tpr2g1286 1027 SMART LRR_typ_2 239 263 IPR003591 -
Tpr2g1286 1027 SMART LRR_typ_2 559 582 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1286 Tpr-Chr2 15052136 15055679 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1286 20 1014 Receptor kinase-like Gene Family AT3G47570 44.091 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1286 Pkinase 2.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1286 - - gmx:100785561 1256.51