Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1285 ATGAAGCACATGTTACATGCATTTTTCTCTGTGTGCCTTAACTTATTACTACTATATAATTTAATCTTACTTTGCTTTTGCACCAAGAAAACTACTTATGCATTAGGAAATGATAGTGATTACTTATCATTGCTCAAATTCAAGGAAGCAATATCCAAAGACACAAATAGAATCTTTGAGTCTTGGAATAGTTCTACACAATTTTGCAAGTGGCATGGAATCACATGCATGGATCAAAGAGTTATAGAGTTGAAACTAGAAGGATATCAATTGCATGGAACCATATCACCTTATGTTGGTAATCTTTCTTTTCTAACAAATTTCAATCTCATGAACAATAGTTTCTATGGAACAATTCCACAAGAATTGTTTCATTTAGTAAAACTACAAAAACTTTACCTTACCAATAACTCATTGGTTGGTGAAATTCCAACAAATTTATCAAGTTTGTTGAATCTCAAAAGCTTATTTTTGCAAGGGAATAATCTTGTTGGTAGAATACCAAATGAAATTGGTTCTCTTAGGAAGCTACAACAAATGAATATTTGGAACAATAATTTAACAGGTGAAATTCCATCATCTATAGGGAATCTTTCATTTCTTATAAATTTTAATGTTGGTTCTAATAACTTAGAGGGAAATATTCCACAAGAAATATGTCATTTGAAGAATTTAGAAACTATCTCATTAGGTATAAACAAATTATCTGGTAAACTTCCACTCTGTCTTTATAACATGTCATCTCTTACTAAAATTTCTGTTGACTTAAACAAATTTAATGGCTCTCTTCCACCAAACATGTTCCATACTCTTCCGAATCTCGAAACACTTTTCATCGGTGGGAATCAAATCTCCGGTCCAATCCCGGCTTCCATCACAAATGCATCTGGCTTAAGAGCATTTGATGTTACTGTAAACAAATTCATTGGTCAAGTTCCAAGTCTTGGGAAGCTAAAAGATCTTCATCTTCTAGGTTTGTCTCAGAACAATCTTGGAAGCAACTCTAGTAATGATTTGGAGTTTGTAGAGTCATTGGAAAATTGTAGTAAGTTGTATGTGATTGATATATCTTACAACAATTTTGGAGGTCCTTTACCGAATTCGTTAGGAAATATGTCTAACAAACTCAACAGTCTATATCTTGGGGGAAATCATATATTAGGAAAAATTCCGGCAGAATTAGGAAATCTAGTTAACCTATATCTCTTTACCGTGGAAGATAACCGTTTTGAAGGGACGATTCCTGATACTTTTGCGAAGTTTCAAAAGTTGCAAGTGTTAGAATTGAGTGGGAACCAATTGTCAGGAAATATACCGGCGTTTATAGGAAACCTCGGTCAGTTGTTTTATTTGGGTTTAGGACATAATATGTTAGAAGGAAATATTCCACCAAGTATAGGAAATTGCCAAAAGTTATACCACTTAGACCTTTCGCAAAATAATCTTCGAGGAACCATACCGATAGAGGTTTTTAGTCTCTTTTCATTAACAAAATTGTTGGACTTGTCGGGAAACTCATTGAGCGGTAGTCTACCACAGGAAGTAGGCAAGCTAGAATATACCGAAATGCTGAATTTCTCTGAGAATCATTTGTCTGGTGATATTCCTGGAACCATCGGAGAATGTGTTAGCTTAGAGTACCTTTATTTGCAAGGAAATTCCTTCAATGGAGTCATACCTGCCTCTTTGGCTTCACTAAAAGGTCTTCAACAATTAGACCTATCACGAAACAGCTTGTCTGGATCAATTCCTAAAGGTATACAAAATATTTCTTTCCTACAATACTTCAATGTATCTTTTAACATGTTGGAAGGCGAGGTACCAACTGAAGGTGTCTTTCGAAATGCAACTGAGGTGGCGGTTACGGGAAACAATAATCTTTGTGGAGGTATTTCAAAACTGAACCTACCTCCATGTCCCTTAAAAGGAAAGAAACATGAAAAACATCATGATTTCAAGTTGATAGCGGCGATAGTTAGTGTGGTTTCTTTTCTTCTTATACTTATAATTATCCTAACTATCTACTGTATGAGGAAAAAAAACAAGACACCTTCTTTTGAGTCGCCGACAATTGGCCTTATGGTTAAGATTTCATATGAAGACTTGTACAATGGAACCGACGGATTCTCAACCAGAAACTTGATAGGATCTGGAAATTTTGGCTCTGTCTACTTAGGAAGTCTCGAGTCAGAGGATAAAGTTGTAGCCATAAAAGTTCTAAAACTTCAAAAGAAGGGAGCTCACAAGAGTTTCATTGCTGAATGTAACGCGCTGAAAAATATTAGACACCGAAATTTGGTTAAGATTTTGACAAGTTGTTCCAGTACAGATTTCAAAGGTCAAGAATTCAAAGCCCTTGTTTTCGAGTACATGAAAAATGGAAACTTAGAAAGTTGGTTGCATCCATCAAAAGAAATTGCAGGTCCACAAAATACATTGAACCTTGCACAAAGGTTAAATATTATTATTGATGTTGCTTCAGCATTTCATTACCTTCATCACGAATGTGAGCAACCGGTCATTCATTGTGATTTAAAGCCTAGCAACATTCTTCTTGATGATTCTATGGTAGCTCATGTGAGTGATTTTGGCATAGCGAAATTGCTCCCGAGTATTGGAGTCTCCTTGATGCAAAATAGCACAGTTGGAATAAAGGGGACTATTGGTTATGCTCCTCCAGAATATGGAATGGGATCTAAGTTGTCGATTGAAGGCGATATGTATAGCTTTGGAATTCTAGTTTTAGAAATGTTAACCGGAAGGAGACCTACTGACGAAATGTTTGAAGACAGTCATAGTCTTCACAATTTTGTTAAAATTTCGATTTCAAATGACCTTTTGCAGATTGTAGACCCAACCATTGTCCACAATGAATTGGAACGAGCTACCGACAGTGAGAATCTTGGCGTTATGCATTCTAATGCAGAGAAATGTCTATTTTCGCTTTTTAGTATTGCACTTGCTTGTTCAATGGAATCACCGAAAGAAAGAATGAGTATGGTTGAAGTCATAAGAGAGGTTAATATAATCAAAAGTTTCTTTCCTACTGAAGGTTTAATAGAAAAAGCTGCATTACAAACACAAAAAGTATGA 3093 0.3537 MKHMLHAFFSVCLNLLLLYNLILLCFCTKKTTYALGNDSDYLSLLKFKEAISKDTNRIFESWNSSTQFCKWHGITCMDQRVIELKLEGYQLHGTISPYVGNLSFLTNFNLMNNSFYGTIPQELFHLVKLQKLYLTNNSLVGEIPTNLSSLLNLKSLFLQGNNLVGRIPNEIGSLRKLQQMNIWNNNLTGEIPSSIGNLSFLINFNVGSNNLEGNIPQEICHLKNLETISLGINKLSGKLPLCLYNMSSLTKISVDLNKFNGSLPPNMFHTLPNLETLFIGGNQISGPIPASITNASGLRAFDVTVNKFIGQVPSLGKLKDLHLLGLSQNNLGSNSSNDLEFVESLENCSKLYVIDISYNNFGGPLPNSLGNMSNKLNSLYLGGNHILGKIPAELGNLVNLYLFTVEDNRFEGTIPDTFAKFQKLQVLELSGNQLSGNIPAFIGNLGQLFYLGLGHNMLEGNIPPSIGNCQKLYHLDLSQNNLRGTIPIEVFSLFSLTKLLDLSGNSLSGSLPQEVGKLEYTEMLNFSENHLSGDIPGTIGECVSLEYLYLQGNSFNGVIPASLASLKGLQQLDLSRNSLSGSIPKGIQNISFLQYFNVSFNMLEGEVPTEGVFRNATEVAVTGNNNLCGGISKLNLPPCPLKGKKHEKHHDFKLIAAIVSVVSFLLILIIILTIYCMRKKNKTPSFESPTIGLMVKISYEDLYNGTDGFSTRNLIGSGNFGSVYLGSLESEDKVVAIKVLKLQKKGAHKSFIAECNALKNIRHRNLVKILTSCSSTDFKGQEFKALVFEYMKNGNLESWLHPSKEIAGPQNTLNLAQRLNIIIDVASAFHYLHHECEQPVIHCDLKPSNILLDDSMVAHVSDFGIAKLLPSIGVSLMQNSTVGIKGTIGYAPPEYGMGSKLSIEGDMYSFGILVLEMLTGRRPTDEMFEDSHSLHNFVKISISNDLLQIVDPTIVHNELERATDSENLGVMHSNAEKCLFSLFSIALACSMESPKERMSMVEVIREVNIIKSFFPTEGLIEKAALQTQKV* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1285 1030 SUPERFAMILY L domain-like 38 331 - -
Tpr2g1285 1030 PRINTS Leucine-rich repeat signature 472 485 - -
Tpr2g1285 1030 PRINTS Leucine-rich repeat signature 566 579 - -
Tpr2g1285 1030 SMART LRR_sd22_2 271 297 - -
Tpr2g1285 1030 SMART LRR_sd22_2 222 237 - -
Tpr2g1285 1030 SMART LRR_sd22_2 566 592 - -
Tpr2g1285 1030 SMART LRR_sd22_2 421 440 - -
Tpr2g1285 1030 SMART LRR_sd22_2 126 149 - -
Tpr2g1285 1030 SMART LRR_sd22_2 469 490 - -
Tpr2g1285 1030 Pfam Leucine rich repeat 399 458 IPR001611 GO:0005515
Tpr2g1285 1030 Pfam Leucine rich repeat 544 603 IPR001611 GO:0005515
Tpr2g1285 1030 SUPERFAMILY Protein kinase-like (PK-like) 683 1006 IPR011009 -
Tpr2g1285 1030 Gene3D Phosphorylase Kinase; domain 1 692 790 - -
Tpr2g1285 1030 ProSiteProfiles Protein kinase domain profile. 709 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1285 1030 PANTHER LRR RECEPTOR-LIKE KINASE 25 1018 - -
Tpr2g1285 1030 Gene3D Ribonuclease Inhibitor 335 648 IPR032675 -
Tpr2g1285 1030 Gene3D Ribonuclease Inhibitor 269 334 IPR032675 -
Tpr2g1285 1030 PANTHER OS04G0122200 PROTEIN 25 1018 - -
Tpr2g1285 1030 SMART serkin_6 709 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1285 1030 SMART LRR_typ_2 246 270 IPR003591 -
Tpr2g1285 1030 SMART LRR_typ_2 126 149 IPR003591 -
Tpr2g1285 1030 SMART LRR_typ_2 421 443 IPR003591 -
Tpr2g1285 1030 SMART LRR_typ_2 271 295 IPR003591 -
Tpr2g1285 1030 SMART LRR_typ_2 150 174 IPR003591 -
Tpr2g1285 1030 SMART LRR_typ_2 566 589 IPR003591 -
Tpr2g1285 1030 SMART LRR_typ_2 445 469 IPR003591 -
Tpr2g1285 1030 SMART LRR_typ_2 493 518 IPR003591 -
Tpr2g1285 1030 Gene3D Transferase(Phosphotransferase) domain 1 791 1016 - -
Tpr2g1285 1030 Pfam Protein kinase domain 711 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1285 1030 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Tpr2g1285 1030 ProSitePatterns Protein kinases ATP-binding region signature. 715 738 IPR017441 GO:0005524
Tpr2g1285 1030 Gene3D Ribonuclease Inhibitor 158 268 IPR032675 -
Tpr2g1285 1030 SUPERFAMILY L domain-like 376 629 - -
Tpr2g1285 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Tpr2g1285 1030 Gene3D Ribonuclease Inhibitor 41 152 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1285 Tpr-Chr2 15046943 15051036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1285 32 1014 Receptor kinase-like Gene Family AT3G47570 45.391 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr2g1285 Pkinase 7.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1285 - - gmx:100792724 1325.84