Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1258 ATGCCACAAAATTGCATAGCACCAAAACCTGAATACTGCAATAGTACTCTCTCTTTGGAAGAAGGATCGCCTCATATGACTGATCCTCATAGCTCAAACAATGAACAATCATTACCAAAACTCATTATGTATCCCATAACTTTGAAGTTTGAGGATTTGGTATACAAAGTGAAAGTAAACCAAAAAGAAAAAACTATACTGAATGGTATCACAGGTGTGGTGTGTCCAGGAGAAATACTAGCTATGTTAGGACCATCAGGCAGTGGAAAAACCACACTCCTTACAGCTCTTGGAGGCCGTCTAGCCGGCAAACTAACCGGAAAAACCACATACAACAATCAACCTTTTTCTGGTTCAATAAAAAGAAGAACAGGTTTTGTAGCTCAAGATGATGTTCTTTACCCTCACTTAACCGTAACCGAAACTCTAGTCTTCACTGCACTTTTAAGGCTTCCACAAACCTTAACAAGAGATGAAAAAGTTGAGCATGTTGAGAGAGTTATAACTGAGTTAGGACTAATCAATTGTAGGAATAGTATGATTGGAGGACCACTTTTGAGAGGTATATCAGGTGGTGAAAAAAGGAGAGTGAGTATAGGACAAGAAATGTTGATTAATCCAAGTTTATTGTTGCTTGATGAACCTACTTCTGGTTTGGATTCTACAACAGCTTTAAGGATCTTGAACACAATCAAAAAACTTGCTAGTGGTGGTAGAACTGTTGTCACAACAATTCATCAACCTTCAAGTAGACTCTACTATATGTTTGATAAGGTTGTGTTACTATCTGAAGGGTGTCCTATCTATTATGGTCCTGCTTCAACTGCTCTAGAATATTTCTCATCTGTTGGTTTCTCAACTAGCATGACTGTTAATCCAGCTGATCTCTTGCTTGATCTTGCCAATGGGATTGCTCCAGACTCTAAGCATGTAACTGAACAAAGTGAGGCTTTGGAACATGAGAGGAAGATTGTGAGAGAATCTCTCATTTCTGCATATGGCAAGAACATAGCTCCAAGGCTAAAAGCTGAAGTTTCTAGCATGGAAGTAAACAACTACAACAACATCACAAAAGATGCTTGCACAAGGAATCAAATGAAACCAGAACAATGGTGTACAACCTGGTGGTATCAGTTCACTGTATTATTACAAAGGGGGGTGAGGGAAAGAAGACATGAAGCCTTCAATAGGCTTAGAATATTCCAAGTCATAAGTGTAGCTTTTCTAGCTGGACTCTTGTGGTGGCATACACCAGAATCACATCTTGAAGATAGGACGGCTTTGCTATTTTTCTTTGCTGTGTTTTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTTCCTCAAGAAAGAAGAATGCTTATAAAGGAACGATCCTCTGGAATGTACCGTCTTTCTTCCTACTTTCTAGCAAGAACAATAGGAGACTTGCCACTAGAGCTAGCACTTCCAACAGCATTTGTCATCATACTATATTGGATGGGAGGACTCAAACCTGATCTTGTAACTTTCATTCTTTCACTTCTTGTTGTTCTTTACAGTGTTGTAGTCTCTCAAAGTCTAGGATTAGCATTTGGTGCTATTTTGATGGAGATTAAACAAGCAACTACACTAGCTTCTGTTACAACACTTGTTTTTCTCATTGCTGGAGGTTACTATATACAACAGATTCCACCTTTTATAGTTTGGCTTAAGTACTTAAGCTATAGCTACTACTGTTACAAGCTTCTACTTGGTGTTCAATACAGTGAAAATGACTATTATCAATGCTCAAAGGGAGAGTTATGCAAGGTTATGGACTTTCCTCCAATTAAATCAATGGGATTGAATAATATGTGGATTGATGTTTCCATCATGGCTTTGATGTTGGTTGGTTATAGATTAGTAGCTTATTTTGCACTTCATAGAGTTAGGTAA 1920 0.3828 MPQNCIAPKPEYCNSTLSLEEGSPHMTDPHSSNNEQSLPKLIMYPITLKFEDLVYKVKVNQKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLAGKLTGKTTYNNQPFSGSIKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPQTLTRDEKVEHVERVITELGLINCRNSMIGGPLLRGISGGEKRRVSIGQEMLINPSLLLLDEPTSGLDSTTALRILNTIKKLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALEYFSSVGFSTSMTVNPADLLLDLANGIAPDSKHVTEQSEALEHERKIVRESLISAYGKNIAPRLKAEVSSMEVNNYNNITKDACTRNQMKPEQWCTTWWYQFTVLLQRGVRERRHEAFNRLRIFQVISVAFLAGLLWWHTPESHLEDRTALLFFFAVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVIILYWMGGLKPDLVTFILSLLVVLYSVVVSQSLGLAFGAILMEIKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYSENDYYQCSKGELCKVMDFPPIKSMGLNNMWIDVSIMALMLVGYRLVAYFALHRVR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1258 639 Pfam ABC-2 type transporter 377 583 IPR013525 GO:0016020|GO:0140359
Tpr2g1258 639 ProSitePatterns ABC transporters family signature. 189 203 IPR017871 GO:0005524
Tpr2g1258 639 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 637 - -
Tpr2g1258 639 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 289 IPR003439 GO:0005524
Tpr2g1258 639 SMART AAA_5 76 266 IPR003593 -
Tpr2g1258 639 Pfam ABC transporter 68 217 IPR003439 GO:0005524
Tpr2g1258 639 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 26 637 - -
Tpr2g1258 639 CDD ABCG_EPDR 45 271 - -
Tpr2g1258 639 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 282 IPR027417 -
Tpr2g1258 639 Pfam ABC-2 type transporter 246 366 IPR043926 GO:0140359
Tpr2g1258 639 Gene3D - 47 284 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1258 Tpr-Chr2 14691038 14694253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1258 46 265 Calmodulin-binding Proteins AT2G36910 28.821 2.64e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1258 K05681 - gmx:100794774 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1258 2 14691038 14694253 Tpr2g1258 2 14691038 14694253 ECH