Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1256 ATGGGGAGTGACCATTGGAAGGCTCATTTGGGCATGGCAGTGGTACAACTATTCAATGGTGGCTACCATGTTATTACTAAAGTGGCTCTTAATGATGGAGTTAGCCAATTAGTTTTCTGCTTCTATAGGGATCTTCTTGCTCTCTTCATTCTTTCTCCCATAGCTTTCTTCAAAGAAAGACAGACAAGGCCACCCATTACTAAACAGCTACTGATGACATTCTTCTTTCTTGGATTAACTGGGATATTTGGAAACCAGCTATTGTTTCTTATTGGTTTAAGTTATACTAATCCAACTTATGCTGCTGCTTTACAACCAGCTATTCCTGTCTTTACCTTTCTGCTTGCTGTGATCATGGGTGTAGAAAGAGTGAACTTGCAGAGTTTTGAAGGTCTAGCAAAGGTTGTTGGAACTATTGTATGTGTTTCGGGTGCCATATTGATGGTTTTGTATCGCGGTCCATCTTTGATAGGTTATACAGAACTGATCATTATACCACAGAGTGAAATAAGAGTCAGTGGTCAGCCAGAGCCTTCTGGATGGTTGATTACTGGTTTACAGGATCTTGGAATAGATAATTTTCAACTTGGAGTTGTGTTCTTGATAGGAAACTGCATATGCATGGCTGCTTTCCTAGCCATCCAGGCACCGGTATTAAAAAAGTATCCTGCAAATCTATCTTTGACAGCATATTCATTCTTCTTTGGAGTTGTACTAATGGCGGTAGTCTCGTTATTCATGACTGATTTGTCATCTGACTGGATTTTGACAGAATCAGAAATACTTGCTGTTGTTTATGCTGGAACTATTACATCTGCCTTTAACTATGCAGTCATTAGTTGGTGCAACAAGATATTGGGACCAGCTTTAGTTGCCCTATACAATCCACTGCAGCCTGGTTTTTCTGCCCTTCTGTCTCAGATATTCCTTGGAAGTCCAATTTACCTCGGAAGTATCATCGGGGGATCTTTGATCATTGCTGGTCTTTATACCGTTACCTGGGCATCTCATAAAGAAAGACAAGCAACTGTTGGAATTACTTCTGATGGTTCTTTGGTCTCTGAACCACTTATTATTCATGAAAAAAGTGCACACCAAAGTGAGCATATATTTTTGGGGTCCTCTAATGCATCTCCAAACCCGAAATCATATGATTAA 1158 0.3998 MGSDHWKAHLGMAVVQLFNGGYHVITKVALNDGVSQLVFCFYRDLLALFILSPIAFFKERQTRPPITKQLLMTFFFLGLTGIFGNQLLFLIGLSYTNPTYAAALQPAIPVFTFLLAVIMGVERVNLQSFEGLAKVVGTIVCVSGAILMVLYRGPSLIGYTELIIIPQSEIRVSGQPEPSGWLITGLQDLGIDNFQLGVVFLIGNCICMAAFLAIQAPVLKKYPANLSLTAYSFFFGVVLMAVVSLFMTDLSSDWILTESEILAVVYAGTITSAFNYAVISWCNKILGPALVALYNPLQPGFSALLSQIFLGSPIYLGSIIGGSLIIAGLYTVTWASHKERQATVGITSDGSLVSEPLIIHEKSAHQSEHIFLGSSNASPNPKSYD* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1256 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 339 - -
Tpr2g1256 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Tpr2g1256 385 Pfam EamA-like transporter family 9 142 IPR000620 GO:0016020|GO:0016021
Tpr2g1256 385 Pfam EamA-like transporter family 196 333 IPR000620 GO:0016020|GO:0016021
Tpr2g1256 385 PANTHER WAT1-RELATED PROTEIN 8 376 IPR030184 GO:0016021|GO:0022857
Tpr2g1256 385 PANTHER NODULIN MTN21/EAMA-LIKE TRANSPORTER FAMILY PROTEIN 8 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1256 Tpr-Chr2 14652605 14656400 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1256 4 267 Nodulin-like Gene Family AT3G45870 64.015 2.15e-112 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1256 - - mtr:MTR_5g025330 615.92