Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1251 ATGGCAACAGCAGTTTCAGGATCAATGGTGGGTGACTCATCATGGCAGGCACATTTGGCAATGGCATTGGTGCAGCTATTCAATGGTGGCTATCATGTAATTACCAAAGTAGCCCTTAATGTTGGGGTTAATCAGTTAGTTTTTTGCCTCTACAGAGATCTACTTGCCCTTTCTATCCTTGCTCCTATTGCTTATATTCGTGAAAAACGGACACGACCACCCATTACTAAGGACCTACTGATTTCATTCTTCTTTCTTGGATTAACTGGGATATTCGGCAACCAACTTCTGTTTCTTATTGGTTTGAGCTATACAAATCCAACTTATGCTGCTGCTACACAGCCAGCAATTCCAGTCTTTACATTTTTGTTCGCTGTAATGATGGGTACAGAAAAAGTGAACTTGCGTAGGTATGAAGGTCTAGCAAAGGTTTTAGGAACTCTTATCTGTGTTTCTGGTGCCATATTGATGGTTTTGTATCGCGGTCCAATTCTGATAGGATATGCAGAAATTGATCATGTAGCACGAAATGAAATTAGTGCGAGAGGTCAACCTGAGCCTTCTGGATGGTTTATCGGTGCTTTACAGGATCGTGGTCTTGGCCATTTTCATCTTGGGGTTCTGTGCTTGATAGGAAATTGCATGTGTATGGCTGCTTTTCTGGCCATTCAGGCACCAGTATTAAAAAAATATCCTGCAAATCTATCTGTCACGGCATATTCATATTTCTTCGGAGCTGCTATGATGGTGACAGTCTCATTTTTAATGACTAGTGAGTCAACTAGCTGGAGTTTGACATCGTCCGAAGTACTTGCTGTTATTTATGCCGGAATTATTGCATCTGCCCTTAACTATGGACTCATTACATGGTGCAACAAAATAATAGGACCAGCTTTGGTTGCCCTATACAATCCACTTCAACCTGCATTTTCTGCCCTACTGTCTCGAATATTCCTCGGAAGTCCGATTTACTTAGGAAGCATCATAGGAGGATCATTTATCATTGCTGGTCTATATACTGTTACTTGGGGATCATATAGAGAAAGAAATGCAACAGTTGGAGTTAGTTGGGAAGCTGAACCACTTATCCGGGATAAATATCACGTTTTTTCTGTGTCCTCTAGTGTATCTACAAGTCCAAAATCATCAGCAGATTAA 1158 0.4102 MATAVSGSMVGDSSWQAHLAMALVQLFNGGYHVITKVALNVGVNQLVFCLYRDLLALSILAPIAYIREKRTRPPITKDLLISFFFLGLTGIFGNQLLFLIGLSYTNPTYAAATQPAIPVFTFLFAVMMGTEKVNLRRYEGLAKVLGTLICVSGAILMVLYRGPILIGYAEIDHVARNEISARGQPEPSGWFIGALQDRGLGHFHLGVLCLIGNCMCMAAFLAIQAPVLKKYPANLSVTAYSYFFGAAMMVTVSFLMTSESTSWSLTSSEVLAVIYAGIIASALNYGLITWCNKIIGPALVALYNPLQPAFSALLSRIFLGSPIYLGSIIGGSFIIAGLYTVTWGSYRERNATVGVSWEAEPLIRDKYHVFSVSSSVSTSPKSSAD* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1251 385 Pfam EamA-like transporter family 205 342 IPR000620 GO:0016020|GO:0016021
Tpr2g1251 385 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020|GO:0016021
Tpr2g1251 385 PANTHER WAT1-RELATED PROTEIN 14 367 - -
Tpr2g1251 385 PANTHER WAT1-RELATED PROTEIN 14 367 IPR030184 GO:0016021|GO:0022857
Tpr2g1251 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 159 - -
Tpr2g1251 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1251 Tpr-Chr2 14625878 14629968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1251 8 276 Nodulin-like Gene Family AT3G45870 69.517 1.05e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1251 - - gmx:100787738 584.719