Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1242 ATGATTTTCGACACGCCGCCCTCGGCCGCCCAAAGCGTGAGGACAAACAGAACTTCATTTGGTTCTAGCATTGGCAATGGGAGTACTCCACTACATAGCTATGCTACTGTTAGCAATGGCGATGACTATGACAGCGACGGATCAAATTTCGCACCACCCACACCAACAGTTCTACCAATGGCTATTCCAGCAGAACTCGCTGGAGCTGGACCTTTGATTGACAGATTCCAGGTGGAAGGTTTTTTAAAGTTGATGCAAAAACAAATTCACTCTGGCGGGAAGCGAGGATTTTTTTCTAAACGATCCGTGGGACCCCAAGTTCGAGAGAAACTTACAATTGAAGACATGCTTTGCTTCCAAAAGGATCCAATACCAACATCATTGCTTAAGCTGAATGGTGATTTGGCAAGCCGGGCAACAAAGATGTTCCAGGTGATTTTAAAATATATCGGGGTTGATTCGTCTTCACTAAGCTTAGAGGATCGGGTTGAGCTTGTAAGTAAACTATACAAGCAAAGTTTGAAGCATTCAGAACTCCGGGACGAACTTTTTGTCCAGTTATCAAAACAAACAAGAAACAATCCTGAGAGGGAATACTTGAACAAATCATGGGAGCTAATGTATTTATGTGCGTCGTGCATGCCTCCTAGCAAAGACATCGGAGGATATCTGTCAGAATATATCCATAACGTGGCACATGGTGCGACTGTTGATCCTGGGATCCGAGAAGCTGCATTAAATACATTAAATGCTTTGAAGCACTCTCTCAAGGCTGGTCCCAGGCACATAATACCTGGGCCTATGGAGATTGAAGCTCGGATTACTCGGAAAAAGCTCACAACTATAGTCTTCTTTCTGGATGAAACATTTGAAGAAATTACATATGACATGTCAACAACTGTTGCGGATGCTGTCGAGGAGCTTGCAGGGATCATTAAACTGTCAACATACTCTAGCTTTGGCTTGTATGAATGCCGCAAAGTTGTCACCAGCTCCAAATCATCTGATTCTGGAAATGAGGAGTACATTGGATTGGATGATAATAAACATATCGGCGATCTACTTGCTGAATTTAAAGCAGTAAAAGATCGAAGTAAGGGAGAAATTTTGCACTGCAAACTGGTATTCAAGAAAAAGTTATTTCGTGAATCAGATGAAGGTGTGACAGATCCAATGTTTTGGCAGTTGTCCTATGTGCAGTTGCAGCATGATTATATTTTGGGTAATTATCCTATTGGAAGGGAAGATGCATCAAGGCTTTCTGCATTGCAAATCTTGGCCGAGATTGGATTTGTTAGAAGACCTGAATCATGCGCTGATTGGAATTCATTTCTCGAGCGATTTCTTCCCAGGCAAATTGCAATGACTCGAGGTAGAAGGGAATGGGAGTTGGACATTCTTTCTTGCTATCATTCACTGGAGCAAGTCACAAAAGAAGATGCAAGACAACAATTTCTGCACATAATAAGAGCACTTCCTTATGGTTTTTCGGTATTTTTCAATGTTCGTAAAATTGATGATCCTATTGGACTCTTGCCTGGACGAATAATATTAGCAATTAACAAGAGAGGGGTTCATTTTTTCCGCCCTATTCCGAAGGAATATTTGCACTCAGCTGAATTAAGAGACATAATGCAATTTGGAAGCAGCAATACTGCTGTATTTTTTAAAATGCGAGTTGCCGGTGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATCTGTGTAGCTCTTCAGACACACATAAATGATGTAATGCTGCGCCGATATTCCAAAACACGATCTTCTCCTACTGGTTCTTTGGATAAAGAAATTTCTAATGAGTTCAAGTCACCGAATTCGGAACCGTACGAGAAACGTGTTCAAGATTTAACAAAAGTTCTTGAAGATTCTAAAAGGAATGTTGATCAATTGCAGGATGAATTGCATGAGAAGCAAAAACTAGAAGAGGAGATGCGCCAAGAATTAGAAGACTTGAAGGATTCTTTAGAAACTTCCAAGCAAAGTCTTGAAGAAGTTACTAATGACCGTGATAGGCTTATATCACTATGTGATGAGAAAGATAAAGAACTTCATGCTAAAATTGTAGAAAAAAGGAGCTTGGAAGCAAAGATGGCCAAGTTGAATAGTTTGATGACAGAGAGAATTACCAATAAGGACACAATTGGAGAAAATGACCAAGCGTTGCGAAAACTTGAAGATGACTTGAAACTTTGTAGAGATGAGTTTATGGTCGCCGAAGAGACCATCAAAAGCTTGACAAATGAGAAGTTGATTTTGACACAAAAGATAACTAAGCTTGAGAAGAAGAATGCTGAAGAGATTAGTTCTCTTCAACGGAAACTCGACCAAGAACGCAAATCTCTGAACTCCCAAGTGCATGACCTTGAAAGAAAACTAGATGTGCTTAGACAAGAATTAGCTGTGGCTCAATCTACACTTTCGGCGAAGGACTCTGAATTGGCTATGTTGAAGAACAATTTAAAAGAACTAGAAGATTTGAGAGAAATGAAAGAGGACATTGACAGAAAGAATGAACAAACAGCTGCCATATTAAGGATGCAAGGGGCTCAACTAGCTGAAATGGAATCGCTTTATAAGGAAGAGCAAGTTCTCAGAAAGCGATATTTCAATACCATAGAAGATATGAAAGGAAAAATACGAGTTTACTGTCGGCTAAGACCTATTGGCGAAAAAGAGATTGCTGAGAAAGAAAGAGATGTTGTAACTACAGTAGACGAATTTACCATTGAGCATCCATGGAAAGATGATAAACCAAAGCAACATCTATATGACCGTGTCTTTAACGGTGACGCCACTCAAGAAGAAGTATTTGAGGATACAAGGTACTTGGTGCAATCTGCTGTAGACGGTTATAATGTTTGCGTATTTGCTTATGGTCAAACCGGCTCTGGAAAGACATTTACAATCTATGGATCCGAAAACAATCCTGGCCTTACACCGCGTGCTACTGCAGAGCTTTTTAGAATTTTAAAGAGAGATAGTAAGAAGTATTCTTTTTCTTTGAAGGCGTACATGTTGGAATTATATCAAGATACACTTGTTGATCTCTTGTTGCCTAAGAATGCAAAGCGATTAAAATTGGACATTAAGAAGGATTCAAAGGGAATGGTAACGGTAGAAAATGTAACAACTGTGCCAATTTCTACTATGGAGGAATTGAATAGCATAATACAAAAGGGTTCCGAACGACGACATACAGCAGGGACACAAATGAATGAAGAAAGCTCAAGATCTCATCTTATACTATCAGTTGTAATTGAAAGTGTCAACCTTCAAAGTCAATCATCCGCAAGAGGAAAGTTGAGTTTTGTTGATCTTGCTGGCTCAGAAAGAATTAAAAAGTCGGGCTCCGAGGGTAGTCAACTGAAAGAAGCTCAAAGTATAAACAAATCATTGTCAGCACTTGGAGATGTTATTAGTGCTTTATCTTCTGGTGGTCAACACATACCTTATAGAAATCACAAGTTAACTATGTTGATGAGTGATTCACTTGGAGGCAATGCGAAAACTCTCATGTTTGTGAATGTATCTCCAGTTGAATCAAGCTTAGACGAGACACATAACTCTCTCATGTATGCGTCACGAGTGAGGTCAATTGTGAACGATCCAAGTAAAAATATTTCTTCGAAAGAGATAGCTCGACTGAAGAAATTAGTTGCTCATTGGAAGGAGCAGGCAGGTAGGCGAGGGGAGGATGAAGATTTAGAAGAAATTCAAGATAAACGACCGACAAAAGAGAAGAACGACGGCCACAGCCATGGCCGCTATACTATGTAG 3810 0.3995 MIFDTPPSAAQSVRTNRTSFGSSIGNGSTPLHSYATVSNGDDYDSDGSNFAPPTPTVLPMAIPAELAGAGPLIDRFQVEGFLKLMQKQIHSGGKRGFFSKRSVGPQVREKLTIEDMLCFQKDPIPTSLLKLNGDLASRATKMFQVILKYIGVDSSSLSLEDRVELVSKLYKQSLKHSELRDELFVQLSKQTRNNPEREYLNKSWELMYLCASCMPPSKDIGGYLSEYIHNVAHGATVDPGIREAALNTLNALKHSLKAGPRHIIPGPMEIEARITRKKLTTIVFFLDETFEEITYDMSTTVADAVEELAGIIKLSTYSSFGLYECRKVVTSSKSSDSGNEEYIGLDDNKHIGDLLAEFKAVKDRSKGEILHCKLVFKKKLFRESDEGVTDPMFWQLSYVQLQHDYILGNYPIGREDASRLSALQILAEIGFVRRPESCADWNSFLERFLPRQIAMTRGRREWELDILSCYHSLEQVTKEDARQQFLHIIRALPYGFSVFFNVRKIDDPIGLLPGRIILAINKRGVHFFRPIPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKTRSSPTGSLDKEISNEFKSPNSEPYEKRVQDLTKVLEDSKRNVDQLQDELHEKQKLEEEMRQELEDLKDSLETSKQSLEEVTNDRDRLISLCDEKDKELHAKIVEKRSLEAKMAKLNSLMTERITNKDTIGENDQALRKLEDDLKLCRDEFMVAEETIKSLTNEKLILTQKITKLEKKNAEEISSLQRKLDQERKSLNSQVHDLERKLDVLRQELAVAQSTLSAKDSELAMLKNNLKELEDLREMKEDIDRKNEQTAAILRMQGAQLAEMESLYKEEQVLRKRYFNTIEDMKGKIRVYCRLRPIGEKEIAEKERDVVTTVDEFTIEHPWKDDKPKQHLYDRVFNGDATQEEVFEDTRYLVQSAVDGYNVCVFAYGQTGSGKTFTIYGSENNPGLTPRATAELFRILKRDSKKYSFSLKAYMLELYQDTLVDLLLPKNAKRLKLDIKKDSKGMVTVENVTTVPISTMEELNSIIQKGSERRHTAGTQMNEESSRSHLILSVVIESVNLQSQSSARGKLSFVDLAGSERIKKSGSEGSQLKEAQSINKSLSALGDVISALSSGGQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIVNDPSKNISSKEIARLKKLVAHWKEQAGRRGEDEDLEEIQDKRPTKEKNDGHSHGRYTM* 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1242 1269 CDD KISc_C_terminal 887 1212 - -
Tpr2g1242 1269 Pfam MyTH4 domain 168 272 IPR000857 GO:0005856
Tpr2g1242 1269 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 611 1260 - -
Tpr2g1242 1269 ProSiteProfiles MyTH4 domain profile. 119 274 IPR000857 GO:0005856
Tpr2g1242 1269 Gene3D - 1213 1261 - -
Tpr2g1242 1269 SUPERFAMILY PH domain-like 499 587 - -
Tpr2g1242 1269 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 889 1238 IPR027417 -
Tpr2g1242 1269 ProSiteProfiles Kinesin motor domain profile. 889 1210 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1242 1269 Gene3D - 278 382 - -
Tpr2g1242 1269 PRINTS Kinesin heavy chain signature 961 982 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1242 1269 PRINTS Kinesin heavy chain signature 1080 1097 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1242 1269 PRINTS Kinesin heavy chain signature 1111 1129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1242 1269 PRINTS Kinesin heavy chain signature 1160 1181 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1242 1269 Gene3D MyTH4 domain 98 277 IPR038185 -
Tpr2g1242 1269 MobiDBLite consensus disorder prediction 8 25 - -
Tpr2g1242 1269 Pfam Kinesin motor domain 895 1210 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tpr2g1242 1269 Coils Coil 732 773 - -
Tpr2g1242 1269 Coils Coil 782 854 - -
Tpr2g1242 1269 MobiDBLite consensus disorder prediction 599 620 - -
Tpr2g1242 1269 SMART B41_5 275 499 IPR019749 -
Tpr2g1242 1269 SMART MyTH4_1 119 274 IPR000857 GO:0005856
Tpr2g1242 1269 MobiDBLite consensus disorder prediction 599 615 - -
Tpr2g1242 1269 MobiDBLite consensus disorder prediction 1 25 - -
Tpr2g1242 1269 SUPERFAMILY Second domain of FERM 377 494 IPR035963 -
Tpr2g1242 1269 PANTHER KINESIN-RELATED 611 1260 IPR027640 GO:0003777|GO:0007018
Tpr2g1242 1269 Gene3D - 497 604 IPR011993 -
Tpr2g1242 1269 Gene3D - 391 492 IPR014352 -
Tpr2g1242 1269 Coils Coil 624 693 - -
Tpr2g1242 1269 Gene3D Kinesin motor domain 876 1212 IPR036961 -
Tpr2g1242 1269 CDD FERM_B-lobe 395 492 IPR019748 -
Tpr2g1242 1269 ProSitePatterns Kinesin motor domain signature. 1110 1121 IPR019821 GO:0003777|GO:0005524|GO:0007018
Tpr2g1242 1269 Pfam FERM central domain 387 499 IPR019748 -
Tpr2g1242 1269 MobiDBLite consensus disorder prediction 1234 1269 - -
Tpr2g1242 1269 CDD FERM_C_KCBP 497 602 - -
Tpr2g1242 1269 ProSiteProfiles FERM domain profile. 279 593 IPR000299 GO:0005856
Tpr2g1242 1269 SMART kinesin_4 887 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1242 Tpr-Chr2 14556858 14564333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1242 34 1260 Calmodulin-binding Proteins AT5G65930 70.887 0.0 1776
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1242 - - gmx:100782701 2101.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1242 2 14556858 14564333 Tpr2g1242 2 14556858 14564333 ECH
Tpr2g1242 2 14556858 14564333 Tpr4g4414 4 51566219 51574685 PCT