Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1217 ATGGTTAAAGTTTGGTTATTGGTTCTAATGATTCTCTACAATGGCTTCTCTTCAACTGTGGATGGCATTCATAATTCAACAAGGCCTGATGTTGTAAATATTGGAGCTCTCTTCTCTTTCAATACTAGTGTTGGTAGGATTATAAAAATCGCTTTAGATGCCGCGGTCGAAGATGTAAATTCTGATCCAAATATTCTCGGCGAGACCAAGCTAAGGCTCTCTCTTCAAGAAGATTCTAAATATAGAGGTTTTCTTAGCATTGCTGAGGTTTTGCAGCTCATGGCTAGAGATACTGTGGCAATAATTGGCCCTCACAGTTCTGTAACAGCTCATGTCATAACTCATATTGCAAATGAGCTTCAAGTTCCCCTTATCTCATTTTCAGCTTTGGACCCTACTCTTTCTTCACTTCAATTCCCATTTTTTATCAGAACTTGCCACAGTGATCTTTTTCAAATGGCTGCAATAGCAGACCTTGTTGACCACTATGGATGGAAAGAAGTCATTGCTGTATACACTGATGATGATAATGGGAGGAATGGAATCAGTGCCTTAGGTGATAAGCTTGCCGAGAAGCGTTGCAGGATCTCGTATAAAGCGCCTGTGAGCCCCGAAGCAACTCCGGAGGAGATAACAAATGCGTTAGTTCAGGTGGCTCTTGCTGAATCAAGAGTTATAGTTGTTCATGCCAACACTCTTTGGGGCCAGAAAGTGTTTAGTGTCGCAAAGAATCTTGGAATGATGGGAACTGGTTACGTGTGGATAGCCACTGCTTTTCTTTCTGCTATTCTTGACATAAGTAGTCCTCTATCTTCTGATAGAATGGATGAAATCCAAGGAGTGTTGACACCGCGCGTGTACACGCCGGATTCAGAGCTTAAAAGAAAGTTTGTTTCTAAATGGAAAAACTTGACTCATGGAAATACTGCCAATGGCCGTCTTGGACTCAGTTTTTTGTCTCTTTATGCATATGATACTATTTTTGCTCTTGCTCATGCACTTGATGCATTTTTCAAGCAAGGGAACAAAATCACATTCTCAAATGACTCAAAGTTATCTTCACTAAAAGGAGACAACTTGCATCTTGATGCATTGAACGTTTTCGATGAAGGATACTCGTTACGTAGAAACATTTACGAGGTTAACATGACAGGTGTGACAGGTTTGTTCAAGTATGGACCTGATAAAAACCTTGTTAATCCTGCATATGAAATCATGAATGTGGTTGGAACCGGGACTCGAAGGATTGGTTATTGGTCTAATCACTCTGGATTATCAGTCATTCCTCCAGAAACACTGCTTTCCAAACCAGGTAATGATTTCAGGGAAAGTACAAAGTTATTACCTGTGATTTGGCCGGGAGACACGGCTCAGAAGCCTCGCGGTTGGGTTTTTCCTAACAACGGAAGGCTATTAAGAATTGGAGTACCAATAGGAGTAAGTTACCAACAATTTGTGTCACAAGTACCAGGCACCGATACATTTCAAGGCTTCTGCATTGATGTGTTTCTTTCTGCAGTTAACCTTTTGCCTTATGCTGTTCCCTATAAGTTTATTCCATATGGGGATCATAAGAACAATCCTAGTAACAGCGAGCTTGTCCGTCGGATAACAACCGGTGAATTTGATGGTGCAGTAGGTGACATTGCAATTACTACAGAAAGAACAAAAATGGTGGATTTTACTCAGCCATTTGTTGAGTCTGGTTTAGTGGTAGTAGCACCTGTTAAGGAGGCAGATACAAGTGCTTTGGCCTTTTTGGCTCCATTTACACCAAGGATGTGGTTTGTCACAGCTGTCTTTTTCATAATAGTTGGAACTGTTGTTTGGATTTTGGAGCATAGGGTGAATGATGAATTTAGAGGACCACCCAGAAAACAAGTGATTACTATTTTTTGGTTTAGCTTTTCAACAATGTTCTTCTCACATAGGGAAAATACAGTGAGCACACCAGGTCGTTGTGTGCTACTTATTTGGTTATTTGTAGTTCTTATAATCACTTCAAGTTACACAGCAAGTCTCACATCAATCCTCACAGTACAACAACTTTCTTCACCCATTAAAGGCATTGAGAGTTTAGTAATCGGCAAAGAACCAATTGGTATCGCTCAGGGTTCATTTTCTAAAGATTATTTAATCCATGAAATTGGTATTGATGAGTCTAGGCTTGTTCCTTTAGTAACACAAGAAGAAGTTGCTAGAGCACTGGAAAAGGGTCCTCAAGATGGTGGCATTGCTGCTTATATCGATCAACGTGCCTATATCGATATCTTCCTCTCAAGCCGCTGTAAATATACTATTGTAGGTCAAGAGTTCACCAGAAATGGTTGGGGATTTGCCTTTCCAAGAGACTCACCATTAGCAGTTGACCTGTCAACTGCCATTTTGCAAATGGTTGACAATGGAGACTTACAAAGGATTCATGACAAATGGCTTTTGAGTAGAGCTTGTTTATCACAAGGTGCAAAGCTTGAAGTCGAAAGACTCAAACTAAAAAGTTTTTGGGGCCTCTATGTGATATGTGGATCAGCTTGTTTGCTTGCTCTACTCATATATGTAATACAGATAATTAGACAGTATCTCAAGCACCAAGCAGAAGAACCTGATTCTCCTGACCAAAACCCAAGCCCGGGATCTTCACGTTTGAGGAGTTTTCTCTCCTTTGCAGATGAAAAAGAAGAGACTGTTAAGAACCGTTCGAAGAGAAAGAAAATGGAGAGAATCTCTTATAGAAGTAGTGAGGGAGGATCATCTTCCATCATCTCCAATAAAGATTATGTTGCTCAGCCATCTTCATGCATAGCTGATTCTGTTTCTAATGGTGGAAGTGAAAAAGTATTCATCAAAGTGGTGTAA 2856 0.4034 MVKVWLLVLMILYNGFSSTVDGIHNSTRPDVVNIGALFSFNTSVGRIIKIALDAAVEDVNSDPNILGETKLRLSLQEDSKYRGFLSIAEVLQLMARDTVAIIGPHSSVTAHVITHIANELQVPLISFSALDPTLSSLQFPFFIRTCHSDLFQMAAIADLVDHYGWKEVIAVYTDDDNGRNGISALGDKLAEKRCRISYKAPVSPEATPEEITNALVQVALAESRVIVVHANTLWGQKVFSVAKNLGMMGTGYVWIATAFLSAILDISSPLSSDRMDEIQGVLTPRVYTPDSELKRKFVSKWKNLTHGNTANGRLGLSFLSLYAYDTIFALAHALDAFFKQGNKITFSNDSKLSSLKGDNLHLDALNVFDEGYSLRRNIYEVNMTGVTGLFKYGPDKNLVNPAYEIMNVVGTGTRRIGYWSNHSGLSVIPPETLLSKPGNDFRESTKLLPVIWPGDTAQKPRGWVFPNNGRLLRIGVPIGVSYQQFVSQVPGTDTFQGFCIDVFLSAVNLLPYAVPYKFIPYGDHKNNPSNSELVRRITTGEFDGAVGDIAITTERTKMVDFTQPFVESGLVVVAPVKEADTSALAFLAPFTPRMWFVTAVFFIIVGTVVWILEHRVNDEFRGPPRKQVITIFWFSFSTMFFSHRENTVSTPGRCVLLIWLFVVLIITSSYTASLTSILTVQQLSSPIKGIESLVIGKEPIGIAQGSFSKDYLIHEIGIDESRLVPLVTQEEVARALEKGPQDGGIAAYIDQRAYIDIFLSSRCKYTIVGQEFTRNGWGFAFPRDSPLAVDLSTAILQMVDNGDLQRIHDKWLLSRACLSQGAKLEVERLKLKSFWGLYVICGSACLLALLIYVIQIIRQYLKHQAEEPDSPDQNPSPGSSRLRSFLSFADEKEETVKNRSKRKKMERISYRSSEGGSSSIISNKDYVAQPSSCIADSVSNGGSEKVFIKVV* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1217 951 Gene3D - 467 583 - -
Tpr2g1217 951 PANTHER GLUTAMATE RECEPTOR 3.6 14 927 - -
Tpr2g1217 951 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Tpr2g1217 951 Pfam Receptor family ligand binding region 50 410 IPR001828 -
Tpr2g1217 951 Gene3D - 148 425 - -
Tpr2g1217 951 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Tpr2g1217 951 Pfam Bacterial extracellular solute-binding proteins, family 3 490 812 IPR001638 -
Tpr2g1217 951 CDD GluR_Plant 472 812 - -
Tpr2g1217 951 SUPERFAMILY Periplasmic binding protein-like I 27 464 IPR028082 -
Tpr2g1217 951 Gene3D - 50 400 - -
Tpr2g1217 951 MobiDBLite consensus disorder prediction 896 918 - -
Tpr2g1217 951 Gene3D - 584 707 - -
Tpr2g1217 951 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 14 927 - -
Tpr2g1217 951 Gene3D - 708 815 - -
Tpr2g1217 951 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
Tpr2g1217 951 PIRSF IGluLR_plant 1 938 IPR017103 -
Tpr2g1217 951 Pfam Ligand-gated ion channel 813 844 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1217 Tpr-Chr2 14235943 14241017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1217 5 913 Ion Channels AT3G51480 58.991 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1217 K05387 - gmx:100785258 1489.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1217 2 14235943 14241017 Tpr4g4391 4 51226063 51231626 PCT