Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1207 ATGACGAAAACCGTTTCCGATGCCAAACCTGTTGATAACCGGTTGAAGCGCAAGGGCGCTGGAGCTGGAACTAAGCAATCGAAGAAAGCTAACAAGGATCCAAACAAGCCTAAGAGGCCTCCAAGTGCTTTCTTCGTGTTCATGTCTGAATTCAGAGAGCGATTCAAGAAGGAGAATCCTAACAACAAATCCGTCGCTGTGGTTGGGAAAGCTGGCGGAAAAGAATGGAAGCTGATGACTGCTGCGGACAAGGCTCCGTACATGGCCACTGCTGAGAAGAAGAAGGAAGAGTACGAGAAGGCTATTCGTGCTTACAACCTTGGCTTGTCTGAGGGCAAGACCGAGGAAGAGGGATCTGACAAGTCAAAGTCAGAAGTGAATGATGAAGATGATGATGATGATGATGATGATGAGGAGGTTGCGTAG 426 0.4812 MTKTVSDAKPVDNRLKRKGAGAGTKQSKKANKDPNKPKRPPSAFFVFMSEFRERFKKENPNNKSVAVVGKAGGKEWKLMTAADKAPYMATAEKKKEEYEKAIRAYNLGLSEGKTEEEGSDKSKSEVNDEDDDDDDDDEEVA* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1207 141 SUPERFAMILY HMG-box 25 107 IPR036910 -
Tpr2g1207 141 Gene3D High mobility group box domain 21 124 IPR036910 -
Tpr2g1207 141 MobiDBLite consensus disorder prediction 105 141 - -
Tpr2g1207 141 SMART hmgende2 36 107 IPR009071 -
Tpr2g1207 141 MobiDBLite consensus disorder prediction 126 141 - -
Tpr2g1207 141 MobiDBLite consensus disorder prediction 1 42 - -
Tpr2g1207 141 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 5 139 IPR031061 -
Tpr2g1207 141 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 5 139 - -
Tpr2g1207 141 Coils Coil 88 108 - -
Tpr2g1207 141 CDD HMGB-UBF_HMG-box 37 87 - -
Tpr2g1207 141 Pfam HMG (high mobility group) box 37 106 IPR009071 -
Tpr2g1207 141 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 37 106 IPR009071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1207 Tpr-Chr2 14145637 14147011 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Tpr2g1207 HMG_box 3.5e-22 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1207 K25507 K22507 gmx:100499992 187.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1207 2 14145637 14147011 Tpr2g1207 2 14145637 14147011 ECH
Tpr2g1207 2 14145637 14147011 Tpr4g4385 4 51140049 51141553 ECH