Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1202 ATGGATTCCTCGCTCACTACCCTTCTTCTCTTCAACAACACCATTCAACCAGAGTTGATGAGAAGCGTGCATGTGTACCGTGGTGAATGTGATGGAGAAGAAAGAGAAGTTGAAAGAGAGTTTGTGTTTTCTAAGAATGGTTCTTATGTTGAAATGCAAGCTACTCCAATTCTTAGCTTGTTGAAATCTTTTGTTTCTAAAGAAATTTTTGAAGGGTATACTAATGGAGTGTGGCTTTGTATTTTTGCTTTTCATGCTTATAATACTCCTCCATTTTCTCACATTCCAACCCTTTTGTTGGTTACAAGAAATCCAAAGCTTCAGGCTATTCCAAACTTGCTCAATGATCTCCACATGATATACAAGTTGGTCCCGAAGGAGGAACCCAAAGATACACCAGAGAGCTCTACAGCGGAAGAATCGAAAGGAAACAACAACAATTTTCAGCCACCAAAAAAACTCTTTCCTGTGCTTAATCAGGATCTCAATTGCCTTCCATATGAAGATGATGAGTCTGAGTTACTGGACGACAAGTCTGGGTTATTGGATAACAAGTCTGAGTTACTGGGTGACGAGACAGATTTTGAAAGTTCATCAGGTTCGGTAGGAAAGAAAAAGAGGGCAGCCAGTGACATTGTTGCAAAAATAACTTTACCAGATTTGGTCAAGTACTTTGATATGCCAATTGTAGAAGCGTCAAAGAGTCTAAATGTTGGCCTTACTGTTCTAAAAAAAAAGTGCAGAGAATTCGGTATTCCCCGCTGGCCTCACAGGAAGATCAAATCACTTGACAGTCTCATTCATGATCTTCAGGAAGAGGCGAAACATCAGGACATGGAGGATAAAGCTGCAGCAATGGCAGTGCTAAGGAGGCAAAAGATGTTGGAATGTGAAAAGGAAAACATAGAGAAAATGCCGTTCATGGACATACGAAGTGAGACCAAGAGATTCAGACAAGAAGTTTTCAAGAGAAGGCACAGATCTAGAGTTATGGAAAAACAGAATTCAACAGTAGCAAGCAATTAG 1026 0.4006 MDSSLTTLLLFNNTIQPELMRSVHVYRGECDGEEREVEREFVFSKNGSYVEMQATPILSLLKSFVSKEIFEGYTNGVWLCIFAFHAYNTPPFSHIPTLLLVTRNPKLQAIPNLLNDLHMIYKLVPKEEPKDTPESSTAEESKGNNNNFQPPKKLFPVLNQDLNCLPYEDDESELLDDKSGLLDNKSELLGDETDFESSSGSVGKKKRAASDIVAKITLPDLVKYFDMPIVEASKSLNVGLTVLKKKCREFGIPRWPHRKIKSLDSLIHDLQEEAKHQDMEDKAAAMAVLRRQKMLECEKENIEKMPFMDIRSETKRFRQEVFKRRHRSRVMEKQNSTVASN* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1202 341 PANTHER PROTEIN RKD4 7 334 IPR044607 GO:0003700
Tpr2g1202 341 Pfam RWP-RK domain 216 263 IPR003035 -
Tpr2g1202 341 MobiDBLite consensus disorder prediction 127 150 - -
Tpr2g1202 341 PANTHER PROTEIN RKD5 7 334 - -
Tpr2g1202 341 ProSiteProfiles RWP-RK domain profile. 198 283 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1202 Tpr-Chr2 14104701 14109026 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1202 15 341 AtRKD Transcription Factor Family AT4G35590 49.398 6.76e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Tpr2g1202 RWP-RK 2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1202 - - gmx:100306328 451.825