Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr2g1200 | ATGGGTCTATGTTTTGCTTCACTCTCTCGCCAACCACCACCCTCTTCCCTCAATATTCCCCACACTTCAGGTTCAAGGAGTAATACTAGTGAAGAGGATCGCAATACTAAGAAAGAGTCATCATCATCATGCAATTTACATGAGAGTAAAGAAGGAAGCACAACTATAAGTGGGAAGTTTCTAGAAATGCCAAATTTGAAGGAGTTTAGTTATGGAGATTTGAAAGTTGCCACAAAGAATTTCAAGTTAGATGCATTGCTTGGTGAAGGTGGTTTTGGTAAAGTTTACAAAGGTTGGTTGAATGCTGAGACACTTACCCCTACCAAAGCTGGTTCTGGAATGATGGTGGCTATCAAGAAATTGAAGTCAGATAGTGTGCAAGGTGTTCAAGAATGGCAGTCAGAAATCAACTTTTTAGGAAGGATTTCTCACCCCAATTTGGTCAAGCTATTGGGTTATTGTACGGACGGTGATGAATTTCTCCTTGTGTACGAGTTCATGCCAAGGGGAAGCTTAGAGAGCCATCTCTTTAAAAGAAATCCTAACATAGAATCACTTTCATGGAACACAAGACTCAAAATCGCTATAGATGCAGCTCGAGGTTTGGCATTCTTGCACTCATCAGAAAAGCAAATCATATATAGAGATTTCAAAGCTTCCAATATACTTCTTGATGAGAATTACAATGCAAAAATTTCAGATTTTGGGTTGGCGAAATTTGGACCATCTGGAGAAGATTCACACGTGACTACTCGAATCATGGGCACGTATGGTTATGCCGCTCCAGAATACATTGCAACAGGTCATTTGTATGTGAAGAGCGATGTTTATGGATTTGGTGTGGTGCTGCTTGAAATGTTGACAGGGTTGCAAGCACTTGATAGAAAAAGAGCCACAGAGAAGCAAAATCTAGTTGAATGGATTAAGCCTTCTCTTTCTGATAAAAGAAAGTTGAAAGGTAACATTGTGGATTATAGGTTAGATGGCCAATATTCACTAAAAGCAGCATTCGAAACAGCTCAGCTTATTCTTAATTGCCTTGAATCTGATCCTAAAAAACGTCCTTCTATGGAAGATGTTTTGGAGACATTAGAAGGCATAAACGCTATCAAGGATAGAAGGAAAATATCCAAGAATCATTGTACTAAGTCTGCAACTATGTAG | 1164 | 0.3918 | MGLCFASLSRQPPPSSLNIPHTSGSRSNTSEEDRNTKKESSSSCNLHESKEGSTTISGKFLEMPNLKEFSYGDLKVATKNFKLDALLGEGGFGKVYKGWLNAETLTPTKAGSGMMVAIKKLKSDSVQGVQEWQSEINFLGRISHPNLVKLLGYCTDGDEFLLVYEFMPRGSLESHLFKRNPNIESLSWNTRLKIAIDAARGLAFLHSSEKQIIYRDFKASNILLDENYNAKISDFGLAKFGPSGEDSHVTTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLQALDRKRATEKQNLVEWIKPSLSDKRKLKGNIVDYRLDGQYSLKAAFETAQLILNCLESDPKKRPSMEDVLETLEGINAIKDRRKISKNHCTKSATM* | 388 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr2g1200 | 387 | MobiDBLite | consensus disorder prediction | 27 | 45 | - | - | |
Tpr2g1200 | 387 | MobiDBLite | consensus disorder prediction | 9 | 26 | - | - | |
Tpr2g1200 | 387 | ProSiteProfiles | Protein kinase domain profile. | 81 | 367 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr2g1200 | 387 | MobiDBLite | consensus disorder prediction | 1 | 50 | - | - | |
Tpr2g1200 | 387 | PANTHER | OS01G0588500 PROTEIN-RELATED | 38 | 379 | - | - | |
Tpr2g1200 | 387 | Pfam | Protein tyrosine and serine/threonine kinase | 82 | 364 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr2g1200 | 387 | SUPERFAMILY | Protein kinase-like (PK-like) | 55 | 364 | IPR011009 | - | |
Tpr2g1200 | 387 | ProSitePatterns | Protein kinases ATP-binding region signature. | 87 | 120 | IPR017441 | GO:0005524 | |
Tpr2g1200 | 387 | Gene3D | Phosphorylase Kinase; domain 1 | 53 | 166 | - | - | |
Tpr2g1200 | 387 | Gene3D | Transferase(Phosphotransferase) domain 1 | 167 | 385 | - | - | |
Tpr2g1200 | 387 | CDD | STKc_IRAK | 87 | 367 | - | - | |
Tpr2g1200 | 387 | PANTHER | SERINE/THREONINE-KINASE CX32, RELATED PROTEIN | 38 | 379 | - | - | |
Tpr2g1200 | 387 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 212 | 224 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr2g1200 | Tpr-Chr2 | 14072101 | 14075047 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr2g1200 | 26 | 364 | Glycoside Hydrolase | AT3G07070 | 44.412 | 9.45e-97 | 293 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Tpr2g1200 | PK_Tyr_Ser-Thr | 6.5e-51 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr2g1200 | - | - | gmx:100777578 | 528.094 |