Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g1200 ATGGGTCTATGTTTTGCTTCACTCTCTCGCCAACCACCACCCTCTTCCCTCAATATTCCCCACACTTCAGGTTCAAGGAGTAATACTAGTGAAGAGGATCGCAATACTAAGAAAGAGTCATCATCATCATGCAATTTACATGAGAGTAAAGAAGGAAGCACAACTATAAGTGGGAAGTTTCTAGAAATGCCAAATTTGAAGGAGTTTAGTTATGGAGATTTGAAAGTTGCCACAAAGAATTTCAAGTTAGATGCATTGCTTGGTGAAGGTGGTTTTGGTAAAGTTTACAAAGGTTGGTTGAATGCTGAGACACTTACCCCTACCAAAGCTGGTTCTGGAATGATGGTGGCTATCAAGAAATTGAAGTCAGATAGTGTGCAAGGTGTTCAAGAATGGCAGTCAGAAATCAACTTTTTAGGAAGGATTTCTCACCCCAATTTGGTCAAGCTATTGGGTTATTGTACGGACGGTGATGAATTTCTCCTTGTGTACGAGTTCATGCCAAGGGGAAGCTTAGAGAGCCATCTCTTTAAAAGAAATCCTAACATAGAATCACTTTCATGGAACACAAGACTCAAAATCGCTATAGATGCAGCTCGAGGTTTGGCATTCTTGCACTCATCAGAAAAGCAAATCATATATAGAGATTTCAAAGCTTCCAATATACTTCTTGATGAGAATTACAATGCAAAAATTTCAGATTTTGGGTTGGCGAAATTTGGACCATCTGGAGAAGATTCACACGTGACTACTCGAATCATGGGCACGTATGGTTATGCCGCTCCAGAATACATTGCAACAGGTCATTTGTATGTGAAGAGCGATGTTTATGGATTTGGTGTGGTGCTGCTTGAAATGTTGACAGGGTTGCAAGCACTTGATAGAAAAAGAGCCACAGAGAAGCAAAATCTAGTTGAATGGATTAAGCCTTCTCTTTCTGATAAAAGAAAGTTGAAAGGTAACATTGTGGATTATAGGTTAGATGGCCAATATTCACTAAAAGCAGCATTCGAAACAGCTCAGCTTATTCTTAATTGCCTTGAATCTGATCCTAAAAAACGTCCTTCTATGGAAGATGTTTTGGAGACATTAGAAGGCATAAACGCTATCAAGGATAGAAGGAAAATATCCAAGAATCATTGTACTAAGTCTGCAACTATGTAG 1164 0.3918 MGLCFASLSRQPPPSSLNIPHTSGSRSNTSEEDRNTKKESSSSCNLHESKEGSTTISGKFLEMPNLKEFSYGDLKVATKNFKLDALLGEGGFGKVYKGWLNAETLTPTKAGSGMMVAIKKLKSDSVQGVQEWQSEINFLGRISHPNLVKLLGYCTDGDEFLLVYEFMPRGSLESHLFKRNPNIESLSWNTRLKIAIDAARGLAFLHSSEKQIIYRDFKASNILLDENYNAKISDFGLAKFGPSGEDSHVTTRIMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMLTGLQALDRKRATEKQNLVEWIKPSLSDKRKLKGNIVDYRLDGQYSLKAAFETAQLILNCLESDPKKRPSMEDVLETLEGINAIKDRRKISKNHCTKSATM* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g1200 387 MobiDBLite consensus disorder prediction 27 45 - -
Tpr2g1200 387 MobiDBLite consensus disorder prediction 9 26 - -
Tpr2g1200 387 ProSiteProfiles Protein kinase domain profile. 81 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr2g1200 387 MobiDBLite consensus disorder prediction 1 50 - -
Tpr2g1200 387 PANTHER OS01G0588500 PROTEIN-RELATED 38 379 - -
Tpr2g1200 387 Pfam Protein tyrosine and serine/threonine kinase 82 364 IPR001245 GO:0004672|GO:0006468
Tpr2g1200 387 SUPERFAMILY Protein kinase-like (PK-like) 55 364 IPR011009 -
Tpr2g1200 387 ProSitePatterns Protein kinases ATP-binding region signature. 87 120 IPR017441 GO:0005524
Tpr2g1200 387 Gene3D Phosphorylase Kinase; domain 1 53 166 - -
Tpr2g1200 387 Gene3D Transferase(Phosphotransferase) domain 1 167 385 - -
Tpr2g1200 387 CDD STKc_IRAK 87 367 - -
Tpr2g1200 387 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 38 379 - -
Tpr2g1200 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g1200 Tpr-Chr2 14072101 14075047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g1200 26 364 Glycoside Hydrolase AT3G07070 44.412 9.45e-97 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr2g1200 PK_Tyr_Ser-Thr 6.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g1200 - - gmx:100777578 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1200 2 14072101 14075047 Tpr4g4381 4 51082071 51087726 PCT